Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g00730_MAGBIO Magnolia biondii HOM05D003655 ORTHO05D004065 0.0e+00 2073.9 1087 100.0
Nn4g22660 Nelumbo nucifera HOM05D003655 ORTHO05D004065 0.0e+00 1244.2 1094 65.3
TAR622G0533 Trochodendron aralioides HOM05D003655 ORTHO05D004065 0.0e+00 1207.6 1032 66.0
TAR629G1826 Trochodendron aralioides HOM05D003655 ORTHO05D004065 8.9e-311 1070.5 1091 59.7
PSO832G3537 Papaver somniferum HOM05D003655 ORTHO05D004065 1.2e-296 1023.5 1095 56.2
PSO063G4513 Papaver somniferum HOM05D003655 ORTHO05D004065 3.4e-283 978.8 1096 54.7
Dinv35101 Davidia involucrata HOM05D003655 ORTHO05D004065 6.1e-256 888.3 880 58.9
QL02p075116 Quercus lobata HOM05D003655 ORTHO05D004065 7.7e-251 871.3 921 55.4
CSS0034547 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 1.3e-250 870.5 934 55.6
CiPaw.03G042300 Carya illinoinensis HOM05D003655 ORTHO05D004065 3.2e-249 865.9 904 57.5
CSS0048500 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 7.2e-249 864.8 885 57.3
CSS0046674 Camellia sinensis var. sinensis HOM05D003655 ORTHO05D004065 3.0e-247 859.4 934 55.1
Manes.15G166100 Manihot esculenta HOM05D003655 ORTHO05D004065 1.0e-239 834.3 932 53.2
Manes.17G115600 Manihot esculenta HOM05D003655 ORTHO05D004065 8.9e-239 831.2 931 53.1
Haze_14727 Corylus avellana HOM05D003655 ORTHO05D004065 1.1e-236 824.3 905 54.8
Aqoxy3G01151 Aquilegia oxysepala HOM05D003655 ORTHO05D004065 5.4e-236 822.0 796 60.7
Prupe.3G290100 Prunus persica HOM05D003655 ORTHO05D004065 1.3e-234 817.4 938 54.8
Thecc.04G015700 Theobroma cacao HOM05D003655 ORTHO05D004065 1.1e-233 814.3 939 51.7
ATR0568G013 Amborella trichopoda HOM05D003655 ORTHO05D004065 5.6e-233 812.0 969 54.2
Potri.017G072100 Populus trichocarpa HOM05D003655 ORTHO05D004065 3.1e-231 806.2 926 52.5
RcHm_v2.0_Chr2g0173051 Rosa chinensis HOM05D003655 ORTHO05D004065 3.1e-231 806.2 914 53.4
MD17G1029900 Malus domestica HOM05D003655 ORTHO05D004065 2.6e-230 803.1 935 53.6
Gohir.A05G356200 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.4e-228 797.3 907 52.1
MD09G1028400 Malus domestica HOM05D003655 ORTHO05D004065 1.4e-228 797.3 939 52.5
Gohir.D04G057000 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.6e-227 793.9 907 52.3
Gorai.012G063700 Gossypium raimondii HOM05D003655 ORTHO05D004065 6.0e-227 792.0 907 52.1
COL.COLO4_29094 Corchorus olitorius HOM05D003655 ORTHO05D004065 1.0e-226 791.2 911 52.9
Ciclev10014173m.g Citrus clementina HOM05D003655 ORTHO05D004065 3.0e-226 789.6 949 51.5
Sabra16G0231200 Salix brachista HOM05D003655 ORTHO05D004065 3.9e-226 789.3 963 50.2
Duzib187G1135 Durio zibethinus HOM05D003655 ORTHO05D004065 1.5e-225 787.3 933 52.0
Potri.001G351532 Populus trichocarpa HOM05D003655 ORTHO05D004065 1.9e-225 786.9 910 52.2
Cc07_g01820 Coffea canephora HOM05D003655 ORTHO05D004065 4.3e-225 785.8 851 53.8
FAN05G2840 Fragaria x ananassa HOM05D003655 ORTHO05D004065 2.3e-223 780.0 926 51.8
FAN14G5704 Fragaria x ananassa HOM05D003655 ORTHO05D004065 3.1e-223 779.6 927 51.8
FvH4_6g51350 Fragaria vesca HOM05D003655 ORTHO05D004065 5.2e-223 778.9 927 51.8
TWI56G0063 Tripterygium wilfordii HOM05D003655 ORTHO05D004065 6.8e-223 778.5 931 52.1
FAN09G1146 Fragaria x ananassa HOM05D003655 ORTHO05D004065 2.3e-218 763.5 925 50.9
FAN02G0206 Fragaria x ananassa HOM05D003655 ORTHO05D004065 1.5e-217 760.8 926 51.1
vmacro18276 Vaccinium macrocarpon HOM05D003655 ORTHO05D004065 2.1e-216 756.9 925 50.5
Rhsim08G0051400 Rhododendron simsii HOM05D003655 ORTHO05D004065 3.1e-215 753.1 874 52.2
Glyma.19G004000 Glycine max HOM05D003655 ORTHO05D004065 2.1e-211 740.3 941 50.1
Glyma.05G004100 Glycine max HOM05D003655 ORTHO05D004065 2.7e-211 740.0 940 49.7
CANSAT64G1680 Cannabis sativa HOM05D003655 ORTHO05D004065 1.7e-210 737.3 883 51.4
Gohir.D09G028200 Gossypium hirsutum HOM05D003655 ORTHO05D004065 8.6e-210 734.9 944 48.7
arahy.Tifrunner.gnm1.ann1.MY3LMM Arachis hypogaea HOM05D003655 ORTHO05D004065 6.2e-208 728.8 868 52.3
Gorai.006G032800 Gossypium raimondii HOM05D003655 ORTHO05D004065 6.2e-208 728.8 946 48.1
Gohir.A09G028600 Gossypium hirsutum HOM05D003655 ORTHO05D004065 3.1e-207 726.5 936 48.4
Dinv33450 Davidia involucrata HOM05D003655 ORTHO05D004065 4.0e-207 726.1 653 63.2
Duzib264G1220 Durio zibethinus HOM05D003655 ORTHO05D004065 2.6e-206 723.4 881 49.7
Sed0000390 Sechium edule HOM05D003655 ORTHO05D004065 4.4e-206 722.6 855 51.3
CsaV3_3G042720 Cucumis sativus L. HOM05D003655 ORTHO05D004065 4.9e-205 719.2 858 50.7
Phvul.004G007600 Phaseolus vulgaris HOM05D003655 ORTHO05D004065 2.4e-204 716.8 944 50.0
MELO3C009984.2 Cucumis melo HOM05D003655 ORTHO05D004065 4.6e-203 712.6 858 50.7
VMungo0464G0503 Vigna mungo HOM05D003655 ORTHO05D004065 3.3e-201 706.4 940 48.6
Gohir.D07G229300 Gossypium hirsutum HOM05D003655 ORTHO05D004065 2.1e-200 703.7 845 49.8
Actinidia36106 Actinidia chinensis HOM05D003655 ORTHO05D004065 2.8e-200 703.4 767 55.5
Gohir.A07G222600 Gossypium hirsutum HOM05D003655 ORTHO05D004065 3.6e-200 703.0 845 49.3
Gorai.001G264400 Gossypium raimondii HOM05D003655 ORTHO05D004065 3.6e-200 703.0 845 49.5
Sabra17G0060300 Salix brachista HOM05D003655 ORTHO05D004065 1.8e-199 700.7 911 48.5
Lj2g0025004 Lotus japonicus HOM05D003655 ORTHO05D004065 4.0e-199 699.5 928 48.0
PGR142G1836 Punica granatum HOM05D003655 ORTHO05D004065 1.2e-198 698.0 927 48.2
Peaxi162Scf00700g00429 Petunia axillaris HOM05D003655 ORTHO05D004065 9.9e-198 694.9 877 49.6
Nitab4.5_0000419g0080 Nicotiana tabacum HOM05D003655 ORTHO05D004065 1.3e-197 694.5 876 50.2
MSTRG.24033 Avicennia marina HOM05D003655 ORTHO05D004065 8.4e-197 691.8 904 48.7
Lj4C88T15 Lonicera japonica HOM05D003655 ORTHO05D004065 2.4e-196 690.3 880 49.0
Sopen12g014870 Solanum pennellii HOM05D003655 ORTHO05D004065 4.2e-196 689.5 882 49.5
Lalb_Chr06g0175811 Lupinus albus HOM05D003655 ORTHO05D004065 4.6e-195 686.0 975 47.9
Psat1g054960 Pisum sativum HOM05D003655 ORTHO05D004065 7.9e-195 685.3 867 49.0
ClCG10G013970 Citrullus lanatus HOM05D003655 ORTHO05D004065 1.3e-194 684.5 858 49.2
Solyc12g035250.3 Solanum lycopersicum HOM05D003655 ORTHO05D004065 6.6e-194 682.2 882 49.2
Eucgr.I01752 Eucalyptus grandis HOM05D003655 ORTHO05D004065 8.7e-194 681.8 858 49.4
Medtr6g004970 Medicago truncatula HOM05D003655 ORTHO05D004065 2.5e-193 680.2 941 47.8
MSTRG.3149 Avicennia marina HOM05D003655 ORTHO05D004065 1.6e-192 677.6 849 49.2
Actinidia35766 Actinidia chinensis HOM05D003655 ORTHO05D004065 1.4e-191 674.5 927 47.8
PGSC0003DMG400004231 Solanum tuberosum HOM05D003655 ORTHO05D004065 4.0e-191 672.9 870 49.3
DCAR_011248 Daucus carota HOM05D003655 ORTHO05D004065 5.3e-191 672.5 905 47.8
Sc03g0007560 Simmondsia chinensis HOM05D003655 ORTHO05D004065 6.9e-191 672.2 888 47.5
Sed0015855 Sechium edule HOM05D003655 ORTHO05D004065 1.2e-190 671.4 862 47.9
Lj4A88G37 Lonicera japonica HOM05D003655 ORTHO05D004065 1.3e-186 657.9 937 46.4
Hund16251 Selenicereus undatus HOM05D003655 ORTHO05D004065 1.5e-185 654.4 942 45.9
Oeu063478.1 Olea europaea HOM05D003655 ORTHO05D004065 5.6e-185 652.5 881 48.1
SalBow6G0256 Salvia bowleyana HOM05D003655 ORTHO05D004065 9.6e-185 651.7 868 46.5
Migut.H00084 Erythranthe guttata HOM05D003655 ORTHO05D004065 2.8e-184 650.2 887 47.4
FAN05G1583 Fragaria x ananassa HOM05D003655 ORTHO05D004065 2.8e-184 650.2 716 53.6
PGSC0003DMG400012599 Solanum tuberosum HOM05D003655 ORTHO05D004065 8.1e-184 648.7 903 46.5
Sopen02g031240 Solanum pennellii HOM05D003655 ORTHO05D004065 1.4e-183 647.9 904 46.1
CDE06G2242 Ceratophyllum demersum HOM05D003655 ORTHO05D004065 4.9e-181 639.4 928 46.2
EL10Ac2g04412 Beta vulgaris HOM05D003655 ORTHO05D004065 2.5e-180 637.1 942 45.2
AUR62023138 Chenopodium quinoa HOM05D003655 ORTHO05D004065 2.1e-179 634.0 941 44.8
SGA_v2.0_scaffold135G34898 Striga asiatica HOM05D003655 ORTHO05D004065 3.5e-179 633.3 916 45.0
Peaxi162Scf00129g01426 Petunia axillaris HOM05D003655 ORTHO05D004065 3.0e-178 630.2 895 46.5
TPR.G14089 Trifolium pratense HOM05D003655 ORTHO05D004065 2.6e-174 617.1 1008 42.9
Hma1.2p1_1291F.1_g273550 Hydrangea macrophylla HOM05D003655 ORTHO05D004065 5.9e-174 615.9 856 46.5
AUR62009456 Chenopodium quinoa HOM05D003655 ORTHO05D004065 2.7e-171 607.1 968 43.0
Gohir.D11G070750 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.3e-170 604.7 881 45.9
Ah.10g038310 Amaranthus hybridus HOM05D003655 ORTHO05D004065 5.1e-170 602.8 951 43.6
SEGI_17646 Sequoiadendron giganteum HOM05D003655 ORTHO05D004065 2.5e-169 600.5 1011 42.2
Nitab4.5_0002385g0010 Nicotiana tabacum HOM05D003655 ORTHO05D004065 5.7e-169 599.4 911 44.9
SGA_v2.0_scaffold481G52311 Striga asiatica HOM05D003655 ORTHO05D004065 7.2e-164 582.4 855 44.6
ECA238G4588 Erigeron canadensis HOM05D003655 ORTHO05D004065 2.7e-163 580.5 910 43.4
Os04g0394300 Oryza sativa ssp. japonica HOM05D003655 ORTHO05D004065 7.9e-163 578.9 827 45.6
Actinidia39401 Actinidia chinensis HOM05D003655 ORTHO05D004065 1.4e-162 578.2 929 44.8
GSVIVG01032423001 Vitis vinifera HOM05D003655 ORTHO05D004065 3.9e-162 576.6 848 45.0
Lsat_1_v5_gn_2_91520 Lactuca sativa HOM05D003655 ORTHO05D004065 1.5e-158 564.7 870 44.4
Cpa.g.sc108.55 Carica papaya HOM05D003655 ORTHO05D004065 1.7e-157 561.2 596 55.2
Ca_04156_v3 Cicer arietinum L. HOM05D003655 ORTHO05D004065 2.1e-155 554.3 657 51.6
THA.LOC104805377 Tarenaya hassleriana HOM05D003655 ORTHO05D004065 3.6e-155 553.5 858 43.9
Carub.0005s0625 Capsella rubella HOM05D003655 ORTHO05D004065 7.9e-155 552.4 848 42.2
Nn3g16761 Nelumbo nucifera HOM05D003655 ORTHO05D004065 3.0e-154 550.4 1092 38.4
HanXRQChr14g0450511 Helianthus annuus HOM05D003655 ORTHO05D004065 4.4e-153 546.6 885 43.6
Nitab4.5_0006802g0070 Nicotiana tabacum HOM05D003655 ORTHO05D004065 1.7e-152 544.7 898 41.4
AL5G17140 Arabidopsis lyrata HOM05D003655 ORTHO05D004065 2.9e-149 533.9 849 41.9
CARHR149170 Cardamine hirsuta HOM05D003655 ORTHO05D004065 6.5e-149 532.7 898 41.3
Zm00001eb085110 Zea mays HOM05D003655 ORTHO05D004065 1.5e-148 531.6 926 42.1
Thhalv10003632m.g Eutrema salsugineum HOM05D003655 ORTHO05D004065 1.9e-148 531.2 941 40.1
HanXRQChr07g0198951 Helianthus annuus HOM05D003655 ORTHO05D004065 3.2e-148 530.4 871 43.1
Sp2g16820 Schrenkiella parvula HOM05D003655 ORTHO05D004065 5.5e-148 529.6 916 40.6
AT3G27700 Arabidopsis thaliana HOM05D003655 ORTHO05D004065 8.8e-146 522.3 849 41.1
Solyc02g086510.4 Solanum lycopersicum HOM05D003655 ORTHO05D004065 1.7e-144 518.1 712 46.6
CDE04G0669 Ceratophyllum demersum HOM05D003655 ORTHO05D004065 2.2e-144 517.7 843 43.7
unitig_748.g6986 Utricularia gibba HOM05D003655 ORTHO05D004065 7.0e-143 512.7 927 40.8
THA.LOC104823948 Tarenaya hassleriana HOM05D003655 ORTHO05D004065 4.2e-140 503.4 910 39.7
unitig_0.g1601 Utricularia gibba HOM05D003655 ORTHO05D004065 8.0e-139 499.2 863 41.9
A06p40940 Brassica napus HOM05D003655 ORTHO05D004065 5.2e-138 496.5 897 40.5
C07p36880 Brassica napus HOM05D003655 ORTHO05D004065 1.2e-137 495.4 929 38.4
BolC7t44200H Brassica oleracea HOM05D003655 ORTHO05D004065 1.2e-137 495.4 929 38.4
BraA06t27015Z Brassica rapa HOM05D003655 ORTHO05D004065 1.2e-137 495.4 886 40.6
Aa31LG2G4980 Aethionema arabicum HOM05D003655 ORTHO05D004065 1.5e-137 495.0 906 39.2
Aa31LG2G4970 Aethionema arabicum HOM05D003655 ORTHO05D004065 2.2e-136 491.1 952 39.4
Actinidia06004 Actinidia chinensis HOM05D003655 ORTHO05D004065 2.7e-134 484.2 689 48.0
A02p35600 Brassica napus HOM05D003655 ORTHO05D004065 1.1e-132 478.8 839 40.4
BraA02t08562Z Brassica rapa HOM05D003655 ORTHO05D004065 1.5e-132 478.4 920 38.6
Ah.16g100890 Amaranthus hybridus HOM05D003655 ORTHO05D004065 7.2e-132 476.1 899 39.5
HPP92_000306 Vanilla planifolia HOM05D003655 ORTHO05D004065 7.2e-132 476.1 587 48.6
BcaB07g30148 Brassica carinata HOM05D003655 ORTHO05D004065 4.7e-131 473.4 832 39.7
BcaC03g17479 Brassica carinata HOM05D003655 ORTHO05D004065 1.0e-130 472.2 919 38.2
C02p54430 Brassica napus HOM05D003655 ORTHO05D004065 1.8e-130 471.5 917 37.8
BolC2t11504H Brassica oleracea HOM05D003655 ORTHO05D004065 1.8e-130 471.5 917 37.9
SEGI_07755 Sequoiadendron giganteum HOM05D003655 ORTHO05D004065 6.3e-128 463.0 1052 35.8
Gorai.007G075900 Gossypium raimondii HOM05D003655 ORTHO05D004065 4.1e-127 460.3 639 46.6
CiPaw.04G027900 Carya illinoinensis HOM05D003655 ORTHO05D004065 1.5e-124 451.8 480 54.0
HanXRQChr09g0255101 Helianthus annuus HOM05D003655 ORTHO05D004065 5.6e-124 449.9 704 41.9
Atru.chr6.2366 Acer truncatum HOM05D003655 ORTHO05D004065 2.2e-120 438.0 448 59.2
PGR083G1229 Punica granatum HOM05D003655 ORTHO05D004065 8.6e-117 426.0 896 36.7
Pp3c2_21410 Physcomitrium patens HOM05D003655 ORTHO05D004065 2.9e-112 411.0 1089 34.3
Lsat_1_v5_gn_4_183501 Lactuca sativa HOM05D003655 ORTHO05D004065 2.0e-110 404.8 858 37.8
Mapoly0078s0024 Marchantia polymorpha HOM05D003655 ORTHO05D004065 3.9e-109 400.6 939 36.1
Nitab4.5_0002682g0090 Nicotiana tabacum HOM05D003655 ORTHO05D004065 2.3e-98 364.8 899 32.6
Pp3c2_22950 Physcomitrium patens HOM05D003655 ORTHO05D004065 2.3e-98 364.8 1064 33.7
Gohir.A11G066766 Gossypium hirsutum HOM05D003655 ORTHO05D004065 4.4e-89 334.0 414 49.0
SMO367G0495 Selaginella moellendorffii HOM05D003655 ORTHO05D004065 9.9e-89 332.8 999 33.8
Actinidia16938 Actinidia chinensis HOM05D003655 ORTHO05D004065 3.8e-88 330.9 343 56.9
BcaC06g30963 Brassica carinata HOM05D003655 ORTHO05D004065 5.4e-87 327.0 593 41.3
Pp3c1_17760 Physcomitrium patens HOM05D003655 ORTHO05D004065 1.7e-85 322.0 832 34.3
Atru.chr6.2365 Acer truncatum HOM05D003655 ORTHO05D004065 1.5e-84 318.9 289 60.2
Medtr2g449870 Medicago truncatula HOM05D003655 ORTHO05D004065 6.0e-70 270.4 391 46.0
Prupe.3G289600 Prunus persica HOM05D003655 ORTHO05D004065 2.9e-64 251.5 467 43.3
Atru.chr6.2272 Acer truncatum HOM05D003655 ORTHO05D004065 3.7e-59 234.6 226 58.4
PSO017G6373 Papaver somniferum HOM05D003655 ORTHO05D004065 6.5e-56 223.8 681 30.2
SHI22312 Sapria himalayana HOM05D003655 ORTHO05D004065 1.8e-53 215.7 425 41.2
Cpa.g.sc108.56 Carica papaya HOM05D003655 ORTHO05D004065 7.4e-52 210.3 298 47.3
Pp3c1_20440 Physcomitrium patens HOM05D003655 ORTHO05D004065 1.1e-50 206.5 598 32.9
Sopen02g031230 Solanum pennellii HOM05D003655 ORTHO05D004065 3.8e-48 198.0 350 41.1
SHI22307 Sapria himalayana HOM05D003655 ORTHO05D004065 2.2e-40 172.2 234 45.3
Haze_14709 Corylus avellana HOM05D003655 ORTHO05D004065 2.5e-39 168.7 121 67.8
Ca_06248_v3 Cicer arietinum L. HOM05D003655 ORTHO05D004065 1.3e-35 156.4 282 41.8
CiPaw.04G028000 Carya illinoinensis HOM05D003655 ORTHO05D004065 4.8e-35 154.5 207 50.2
Gohir.A11G066633 Gossypium hirsutum HOM05D003655 ORTHO05D004065 1.8e-34 152.5 263 42.2
Cfa007935 Carpinus fangiana HOM05D003655 ORTHO05D004065 2.1e-30 139.0 108 63.9
Medtr2g449950 Medicago truncatula HOM05D003655 ORTHO05D004065 4.2e-23 114.8 149 48.3
Sopen01g024710 Solanum pennellii HOM05D003655 ORTHO05D004065 5.7e-20 104.4 116 53.4
CBR_g4653 Chara braunii HOM05D003655 ORTHO05D004065 3.8e-16 91.7 154 37.7
Actinidia25101 Actinidia chinensis HOM05D003655 ORTHO05D004065 6.5e-16 90.9 81 61.7
CBR_g57010 Chara braunii HOM05D003655 ORTHO05D004065 5.5e-15 87.8 113 45.1
Ca_29533_v3 Cicer arietinum L. HOM05D003655 ORTHO05D004065 1.6e-14 86.3 118 46.6
HPP92_000305 Vanilla planifolia HOM05D000527 ORTHO05D000559 8.0e-14 84.0 98 50.0
Peaxi162Scf00417g00004 Petunia axillaris HOM05D003655 ORTHO05D004065 6.8e-13 80.9 161 39.8
Medtr2g449970 Medicago truncatula HOM05D003655 ORTHO05D004065 1.5e-12 79.7 51 66.7
Ca_31040_v3 Cicer arietinum L. HOM05D003655 ORTHO05D004065 1.8e-10 72.8 164 37.8
TAR371G1136 Trochodendron aralioides HOM05D030477 ORTHO05D004065 1.6e-09 69.7 38 86.8
Sopen01g024690 Solanum pennellii HOM05D000006 ORTHO05D000695 1.7e-08 66.2 132 39.4
Solyc01g058690.1 Solanum lycopersicum HOM05D003655 ORTHO05D004065 2.3e-08 65.9 94 45.7
AUR62012685 Chenopodium quinoa HOM05D000561 ORTHO05D000514 6.1e-06 57.8 115 33.0
AUR62021972 Chenopodium quinoa HOM05D000561 ORTHO05D000514 6.1e-06 57.8 115 33.0


User provided reference genes

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