Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI10_g00404_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 4.1e-53 211.1 103 100.0
MBI16_g46012_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 3.8e-51 204.5 103 98.1
MBI14_g30585_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 4.3e-50 201.1 103 95.1
MBI16_g17111_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 6.1e-49 197.2 103 93.2
MBI06_g42714_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 4.0e-48 194.5 100 94.0
MBI18_g04909_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D016624 1.5e-47 192.6 100 93.0
MBI04_g06620_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 9.8e-47 189.9 100 91.0
MBI11_g09986_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 2.2e-46 188.7 100 92.0
MBI11_g17728_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 2.9e-46 188.3 100 91.0
TAR628G0590 Trochodendron aralioides HOM05D004661 ORTHO05D005827 3.1e-24 115.2 101 57.4
TAR376G0508 Trochodendron aralioides HOM05D004661 ORTHO05D005827 4.0e-24 114.8 101 55.4
MD08G1192800 Malus domestica HOM05D004661 ORTHO05D005827 5.8e-23 110.9 100 54.0
Aqoxy5G01331 Aquilegia oxysepala HOM05D004661 ORTHO05D005827 5.4e-21 104.4 101 50.5
MBI06_g18796_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 7.1e-21 104.0 48 97.9
TWI12G0736 Tripterygium wilfordii HOM05D004661 ORTHO05D005827 7.1e-21 104.0 101 53.5
MD15G1381500 Malus domestica HOM05D004661 ORTHO05D005827 1.2e-20 103.2 101 49.5
Nn5g29943 Nelumbo nucifera HOM05D004661 ORTHO05D005827 1.6e-20 102.8 101 54.5
Oeu016837.1 Olea europaea HOM05D004661 ORTHO05D005827 3.5e-20 101.7 101 50.5
Manes.02G147000 Manihot esculenta HOM05D004661 ORTHO05D005827 4.6e-20 101.3 100 50.0
Actinidia10366 Actinidia chinensis HOM05D004661 ORTHO05D005827 6.0e-20 100.9 100 50.0
Prupe.1G527400 Prunus persica HOM05D004661 ORTHO05D005827 1.7e-19 99.4 101 48.5
DCAR_012867 Daucus carota HOM05D004661 ORTHO05D005827 3.9e-19 98.2 101 51.5
ATR0022G055 Amborella trichopoda HOM05D004661 ORTHO05D005827 5.1e-19 97.8 101 51.5
MSTRG.22174 Avicennia marina HOM05D004661 ORTHO05D005827 5.1e-19 97.8 103 50.5
CiPaw.08G054000 Carya illinoinensis HOM05D004661 ORTHO05D005827 2.5e-18 95.5 101 47.5
Rhsim06G0074200 Rhododendron simsii HOM05D004661 ORTHO05D005827 4.3e-18 94.7 101 49.5
CsaV3_3G047860 Cucumis sativus L. HOM05D004661 ORTHO05D005827 5.6e-18 94.4 100 50.0
Cc10_g15570 Coffea canephora HOM05D004661 ORTHO05D005827 7.3e-18 94.0 101 49.5
Potri.005G158300 Populus trichocarpa HOM05D004661 ORTHO05D005827 1.3e-17 93.2 101 49.5
QL09p017125 Quercus lobata HOM05D004661 ORTHO05D005827 1.6e-17 92.8 101 46.5
RcHm_v2.0_Chr7g0237521 Rosa chinensis HOM05D004661 ORTHO05D005827 1.6e-17 92.8 100 46.0
vmacro21311 Vaccinium macrocarpon HOM05D004661 ORTHO05D005827 1.6e-17 92.8 101 49.5
Atru.chr13.1049 Acer truncatum HOM05D004661 ORTHO05D005827 3.6e-17 91.7 101 44.6
PGR042G3759 Punica granatum HOM05D004661 ORTHO05D005827 6.2e-17 90.9 109 48.6
FAN18G2343 Fragaria x ananassa HOM05D004661 ORTHO05D005827 8.1e-17 90.5 100 44.0
Ca_15986_v3 Cicer arietinum L. HOM05D004661 ORTHO05D005827 1.1e-16 90.1 100 45.0
Migut.N02866 Erythranthe guttata HOM05D004661 ORTHO05D005827 3.1e-16 88.6 103 47.6
FvH4_5g35830 Fragaria vesca HOM05D004661 ORTHO05D005827 3.1e-16 88.6 100 44.0
Peaxi162Scf00281g00711 Petunia axillaris HOM05D004661 ORTHO05D005827 4.0e-16 88.2 101 44.6
VMungo1309G0150 Vigna mungo HOM05D004661 ORTHO05D005827 5.3e-16 87.8 100 42.0
AUR62027850 Chenopodium quinoa HOM05D004661 ORTHO05D005827 6.9e-16 87.4 101 45.5
FAN04G0711 Fragaria x ananassa HOM05D004661 ORTHO05D005827 6.9e-16 87.4 101 43.6
Lj4A732G49 Lonicera japonica HOM05D004661 ORTHO05D005827 6.9e-16 87.4 101 46.5
THA.LOC104799016 Tarenaya hassleriana HOM05D004661 ORTHO05D005827 9.0e-16 87.0 101 46.5
Psat5g045560 Pisum sativum HOM05D004661 ORTHO05D005827 1.2e-15 86.7 100 42.0
Thecc.08G067600 Theobroma cacao HOM05D004661 ORTHO05D005827 1.2e-15 86.7 101 43.6
MELO3C003537.2 Cucumis melo HOM05D004661 ORTHO05D005827 1.5e-15 86.3 100 49.0
FAN13G1835 Fragaria x ananassa HOM05D004661 ORTHO05D005827 2.0e-15 85.9 101 43.6
Sed0023876 Sechium edule HOM05D004661 ORTHO05D005827 2.0e-15 85.9 101 46.5
GSVIVG01009135001 Vitis vinifera HOM05D004661 ORTHO05D005827 2.0e-15 85.9 99 47.5
Haze_22346 Corylus avellana HOM05D004661 ORTHO05D005827 2.6e-15 85.5 104 49.0
SGA_v2.0_scaffold84G26469 Striga asiatica HOM05D004661 ORTHO05D005827 2.6e-15 85.5 104 46.2
Gorai.010G036000 Gossypium raimondii HOM05D004661 ORTHO05D005827 4.4e-15 84.7 101 43.6
Gohir.D06G032700 Gossypium hirsutum HOM05D004661 ORTHO05D005827 5.8e-15 84.3 101 43.6
Nitab4.5_0001507g0080 Nicotiana tabacum HOM05D004661 ORTHO05D005827 5.8e-15 84.3 101 44.6
Phvul.009G038100 Phaseolus vulgaris HOM05D004661 ORTHO05D005827 5.8e-15 84.3 100 41.0
Glyma.04G093100 Glycine max HOM05D004661 ORTHO05D005827 7.6e-15 84.0 100 40.0
CSS0032958 Camellia sinensis var. sinensis HOM05D004661 ORTHO05D005827 1.3e-14 83.2 104 47.1
TPR.G26024 Trifolium pratense HOM05D004661 ORTHO05D005827 1.7e-14 82.8 100 42.0
Duzib041G0224 Durio zibethinus HOM05D004661 ORTHO05D005827 2.9e-14 82.0 101 40.6
Gohir.A06G032640 Gossypium hirsutum HOM05D004661 ORTHO05D005827 3.8e-14 81.6 101 42.6
Solyc04g076020.3 Solanum lycopersicum HOM05D004661 ORTHO05D005827 4.9e-14 81.3 99 44.4
Cfa013702 Carpinus fangiana HOM05D004661 ORTHO05D005827 8.4e-14 80.5 106 41.5
MBI13_g01675_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 8.4e-14 80.5 46 87.0
Duzib093G2117 Durio zibethinus HOM05D004661 ORTHO05D005827 1.1e-13 80.1 101 41.6
MBI08_g18173_MAGBIO Magnolia biondii HOM05D004661 ORTHO05D005827 1.1e-13 80.1 46 84.8
Ciclev10000370m.g Citrus clementina HOM05D004661 ORTHO05D005827 1.4e-13 79.7 101 44.6
Sopen04g029970 Solanum pennellii HOM05D004661 ORTHO05D005827 1.9e-13 79.3 99 43.4
Cpa.g.sc608.2 Carica papaya HOM05D004661 ORTHO05D005827 2.4e-13 79.0 102 45.1
Nitab4.5_0006922g0020 Nicotiana tabacum HOM05D004661 ORTHO05D005827 2.4e-13 79.0 102 43.1
THA.LOC104814992 Tarenaya hassleriana HOM05D004661 ORTHO05D005827 2.4e-13 79.0 101 44.6
Glyma.06G094900 Glycine max HOM05D004661 ORTHO05D005827 4.2e-13 78.2 100 38.0
Medtr3g100690 Medicago truncatula HOM05D004661 ORTHO05D005827 4.2e-13 78.2 100 41.0
Sed0012148 Sechium edule HOM05D004661 ORTHO05D005827 5.4e-13 77.8 100 45.0
AUR62019009 Chenopodium quinoa HOM05D004661 ORTHO05D005827 7.1e-13 77.4 101 43.6
Gohir.D05G224100 Gossypium hirsutum HOM05D004661 ORTHO05D005827 7.1e-13 77.4 101 40.6
Gorai.009G231600 Gossypium raimondii HOM05D004661 ORTHO05D005827 7.1e-13 77.4 101 40.6
arahy.Tifrunner.gnm1.ann1.438KDZ Arachis hypogaea HOM05D004661 ORTHO05D005827 9.3e-13 77.0 100 41.0
PSO210G1320 Papaver somniferum HOM05D004661 ORTHO05D005827 9.3e-13 77.0 100 43.0
arahy.Tifrunner.gnm1.ann1.D85VJY Arachis hypogaea HOM05D004661 ORTHO05D005827 1.2e-12 76.6 100 41.0
SEGI_03893 Sequoiadendron giganteum HOM05D004661 ORTHO05D005827 2.1e-12 75.9 101 43.6
SEGI_24481 Sequoiadendron giganteum HOM05D004661 ORTHO05D005827 2.1e-12 75.9 101 43.6
Mapoly0005s0266 Marchantia polymorpha HOM05D004661 ORTHO05D005827 2.7e-12 75.5 100 43.0
Sc26g0000230 Simmondsia chinensis HOM05D004661 ORTHO05D005827 2.7e-12 75.5 101 42.6
Hund27004 Selenicereus undatus HOM05D004661 ORTHO05D005827 4.6e-12 74.7 103 44.7
Gohir.A05G221400 Gossypium hirsutum HOM05D004661 ORTHO05D005827 6.0e-12 74.3 101 39.6
A10p26740 Brassica napus HOM05D004661 ORTHO05D005827 1.0e-11 73.6 101 40.6
BraA10t44730Z Brassica rapa HOM05D004661 ORTHO05D005827 1.0e-11 73.6 101 40.6
C09p65890 Brassica napus HOM05D004661 ORTHO05D005827 1.3e-11 73.2 101 42.6
COL.COLO4_35194 Corchorus olitorius HOM05D004661 ORTHO05D005827 1.3e-11 73.2 101 35.6
Eucgr.F02126 Eucalyptus grandis HOM05D004661 ORTHO05D005827 1.3e-11 73.2 101 43.6
Lsat_1_v5_gn_1_2220 Lactuca sativa HOM05D004661 ORTHO05D005827 1.3e-11 73.2 101 41.6
Actinidia30809 Actinidia chinensis HOM05D004661 ORTHO05D005827 1.7e-11 72.8 59 59.3
BcaC04g19274 Brassica carinata HOM05D004661 ORTHO05D005827 1.7e-11 72.8 101 42.6
BolC9t59411H Brassica oleracea HOM05D004661 ORTHO05D005827 1.7e-11 72.8 101 42.6
CANSAT25G3216 Cannabis sativa HOM05D004661 ORTHO05D005827 2.3e-11 72.4 101 41.6
Sp6g32550 Schrenkiella parvula HOM05D004661 ORTHO05D005827 2.3e-11 72.4 101 40.6
Lj1g0004448 Lotus japonicus HOM05D004661 ORTHO05D005827 6.6e-11 70.9 100 36.0
CARHR202350 Cardamine hirsuta HOM05D004661 ORTHO05D005827 8.7e-11 70.5 101 39.6
EL10Ac1g01103 Beta vulgaris HOM05D004661 ORTHO05D005827 1.1e-10 70.1 101 43.6
Lalb_Chr23g0270111 Lupinus albus HOM05D004661 ORTHO05D005827 1.1e-10 70.1 101 37.6
Ah.05g170630 Amaranthus hybridus HOM05D004661 ORTHO05D005827 1.5e-10 69.7 101 43.6
Aa31LG3G16190 Aethionema arabicum HOM05D004661 ORTHO05D005827 1.9e-10 69.3 101 41.6
Carub.0006s0943 Capsella rubella HOM05D004661 ORTHO05D005827 1.9e-10 69.3 101 37.6
AL6G21500 Arabidopsis lyrata HOM05D004661 ORTHO05D005827 5.6e-10 67.8 101 38.6
ECA247G4144 Erigeron canadensis HOM05D004661 ORTHO05D005827 5.6e-10 67.8 100 42.0
Phvul.008G143100 Phaseolus vulgaris HOM05D004661 ORTHO05D005827 7.3e-10 67.4 100 39.0
AT5G10940 Arabidopsis thaliana HOM05D004661 ORTHO05D005827 9.6e-10 67.0 101 40.6
SHI23738 Sapria himalayana HOM05D004661 ORTHO05D005827 9.6e-10 67.0 55 58.2
Thhalv10012761m.g Eutrema salsugineum HOM05D004661 ORTHO05D005827 2.1e-09 65.9 104 37.5
AagrBONN_evm.TU.Sc2ySwM_228.1068 Anthoceros agrestis HOM05D004661 ORTHO05D005827 3.6e-09 65.1 98 38.8
CDE10G1141 Ceratophyllum demersum HOM05D004661 ORTHO05D005827 3.6e-09 65.1 101 40.6
HanXRQChr02g0047021 Helianthus annuus HOM05D004661 ORTHO05D005827 6.2e-09 64.3 101 41.6
Zm00001eb006570 Zea mays HOM05D004661 ORTHO05D005827 3.4e-07 58.5 103 37.9
HPP92_009332 Vanilla planifolia HOM05D004661 ORTHO05D005827 9.9e-07 57.0 51 52.9
Zm00001eb401530 Zea mays HOM05D004661 ORTHO05D005827 9.9e-07 57.0 63 47.6


User provided reference genes

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