Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g43115_MAGBIO Magnolia biondii HOM05D001732 ORTHO05D006715 1.5e-81 306.2 159 100.0
MBI08_g46842_MAGBIO Magnolia biondii HOM05D001732 ORTHO05D006715 8.9e-31 137.5 195 52.3
MBI08_g41940_MAGBIO Magnolia biondii HOM05D001732 ORTHO05D006715 2.6e-30 136.0 77 100.0
TAR625G1178 Trochodendron aralioides HOM05D001732 ORTHO05D006715 2.3e-18 96.3 82 68.3
PSO170G3407 Papaver somniferum HOM05D001732 ORTHO05D006715 2.5e-17 92.8 76 64.5
PSO210G2512 Papaver somniferum HOM05D001732 ORTHO05D006715 2.5e-17 92.8 76 64.5
Manes.02G226700 Manihot esculenta HOM05D001732 ORTHO05D006715 2.8e-16 89.4 77 62.3
Nn3g18505 Nelumbo nucifera HOM05D001732 ORTHO05D006715 2.8e-16 89.4 74 68.9
FAN15G0072 Fragaria x ananassa HOM05D001732 ORTHO05D006715 6.2e-16 88.2 119 47.1
CDE08G0347 Ceratophyllum demersum HOM05D001732 ORTHO05D006715 8.1e-16 87.8 69 65.2
MSTRG.2679 Avicennia marina HOM05D001732 ORTHO05D006715 1.1e-15 87.4 64 68.8
Potri.002G015002 Populus trichocarpa HOM05D001732 ORTHO05D006715 1.4e-15 87.0 73 65.8
Sabra02G0012000 Salix brachista HOM05D001732 ORTHO05D006715 1.4e-15 87.0 73 65.8
GSVIVG01008724001 Vitis vinifera HOM05D001732 ORTHO05D006715 1.8e-15 86.7 82 59.8
ATR0661G291 Amborella trichopoda HOM05D001732 ORTHO05D006715 2.4e-15 86.3 77 62.3
Ciclev10002649m.g Citrus clementina HOM05D001732 ORTHO05D006715 2.4e-15 86.3 83 57.8
MD08G1006500 Malus domestica HOM05D001732 ORTHO05D006715 4.0e-15 85.5 83 60.2
Dinv24804 Davidia involucrata HOM05D001732 ORTHO05D006715 9.0e-15 84.3 78 62.8
Actinidia37958 Actinidia chinensis HOM05D001732 ORTHO05D006715 1.2e-14 84.0 58 70.7
Cc10_g01020 Coffea canephora HOM05D001732 ORTHO05D006715 1.2e-14 84.0 66 65.2
Duzib116G0808 Durio zibethinus HOM05D001732 ORTHO05D006715 1.2e-14 84.0 79 54.4
ECA233G1657 Erigeron canadensis HOM05D001732 ORTHO05D006715 1.2e-14 84.0 64 62.5
TWI12G0398 Tripterygium wilfordii HOM05D001732 ORTHO05D006715 2.0e-14 83.2 68 63.2
HPP92_015011 Vanilla planifolia HOM05D001732 ORTHO05D006715 2.0e-14 83.2 68 63.2
arahy.Tifrunner.gnm1.ann1.ND8TJ1 Arachis hypogaea HOM05D001732 ORTHO05D006715 2.6e-14 82.8 78 60.3
Gorai.007G240300 Gossypium raimondii HOM05D001732 ORTHO05D006715 2.6e-14 82.8 79 58.2
Thecc.08G053200 Theobroma cacao HOM05D001732 ORTHO05D006715 2.6e-14 82.8 77 55.8
Aqoxy6G01904 Aquilegia oxysepala HOM05D001732 ORTHO05D006715 3.4e-14 82.4 65 63.1
CSS0027369 Camellia sinensis var. sinensis HOM05D001732 ORTHO05D006715 4.4e-14 82.0 82 52.4
CiPaw.04G051700 Carya illinoinensis HOM05D001732 ORTHO05D006715 4.4e-14 82.0 77 58.4
Eucgr.F03702 Eucalyptus grandis HOM05D001732 ORTHO05D006715 4.4e-14 82.0 77 58.4
Os04g0663500 Oryza sativa ssp. japonica HOM05D001732 ORTHO05D006715 4.4e-14 82.0 79 57.0
COL.COLO4_26069 Corchorus olitorius HOM05D001732 ORTHO05D006715 5.8e-14 81.6 79 53.2
Lj1C183T3 Lonicera japonica HOM05D004427 ORTHO05D005381 5.8e-14 81.6 80 56.2
RcHm_v2.0_Chr6g0303781 Rosa chinensis HOM05D001732 ORTHO05D006715 5.8e-14 81.6 78 60.3
Atru.chr13.201 Acer truncatum HOM05D001732 ORTHO05D006715 7.6e-14 81.3 80 56.2
AUR62013855 Chenopodium quinoa HOM05D001732 ORTHO05D006715 7.6e-14 81.3 55 69.1
FAN27G1331 Fragaria x ananassa HOM05D001732 ORTHO05D006715 7.6e-14 81.3 77 57.1
EL10Ac1g02055 Beta vulgaris HOM05D001732 ORTHO05D006715 9.9e-14 80.9 83 56.6
CSS0031494 Camellia sinensis var. sinensis HOM05D001732 ORTHO05D006715 9.9e-14 80.9 58 67.2
AUR62036745 Chenopodium quinoa HOM05D001732 ORTHO05D006715 9.9e-14 80.9 55 67.3
Gohir.D11G222700 Gossypium hirsutum HOM05D001732 ORTHO05D006715 9.9e-14 80.9 79 57.0
Lj3g0013314 Lotus japonicus HOM05D001732 ORTHO05D006715 1.3e-13 80.5 54 70.4
QL12p036301 Quercus lobata HOM05D001732 ORTHO05D006715 1.3e-13 80.5 68 58.8
Zm00001eb067320 Zea mays HOM05D001732 ORTHO05D006715 1.3e-13 80.5 78 55.1
CsaV3_4G036990 Cucumis sativus L. HOM05D001732 ORTHO05D006715 2.2e-13 79.7 67 61.2
SGA_v2.0_scaffold145G36108 Striga asiatica HOM05D001732 ORTHO05D006715 2.2e-13 79.7 79 58.2
arahy.Tifrunner.gnm1.ann1.60EZUA Arachis hypogaea HOM05D001732 ORTHO05D006715 2.9e-13 79.3 70 57.1
Glyma.12G027967 Glycine max HOM05D001732 ORTHO05D006715 2.9e-13 79.3 59 64.4
Gohir.A11G200232 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.9e-13 79.3 79 54.4
Lsat_1_v5_gn_8_28861 Lactuca sativa HOM05D001732 ORTHO05D006715 2.9e-13 79.3 82 52.4
SalBow7G3452 Salvia bowleyana HOM05D001732 ORTHO05D006715 2.9e-13 79.3 81 56.8
TWI77G0460 Tripterygium wilfordii HOM05D001732 ORTHO05D006715 2.9e-13 79.3 82 58.5
vmacro04384 Vaccinium macrocarpon HOM05D001732 ORTHO05D006715 2.9e-13 79.3 75 61.3
FAN20G1153 Fragaria x ananassa HOM05D001732 ORTHO05D006715 3.8e-13 79.0 77 55.8
ClCG05G015370 Citrullus lanatus HOM05D001732 ORTHO05D006715 4.9e-13 78.6 75 57.3
Gohir.D04G192600 Gossypium hirsutum HOM05D001732 ORTHO05D006715 4.9e-13 78.6 70 57.1
Cpa.g.sc128.68 Carica papaya HOM05D001732 ORTHO05D006715 8.4e-13 77.8 71 59.2
Glyma.11G102700 Glycine max HOM05D001732 ORTHO05D006715 8.4e-13 77.8 58 62.1
Glyma.11G102900 Glycine max HOM05D001732 ORTHO05D006715 8.4e-13 77.8 58 62.1
Gorai.006G274900 Gossypium raimondii HOM05D001732 ORTHO05D006715 8.4e-13 77.8 64 59.4
Migut.N02762 Erythranthe guttata HOM05D001732 ORTHO05D006715 1.1e-12 77.4 83 59.0
Manes.02G226801 Manihot esculenta HOM05D001732 ORTHO05D006715 1.1e-12 77.4 77 54.5
Peaxi162Scf00254g00422 Petunia axillaris HOM05D001732 ORTHO05D006715 1.1e-12 77.4 76 55.3
Prupe.1G358400 Prunus persica HOM05D001732 ORTHO05D006715 1.1e-12 77.4 78 59.0
Rhsim07G0251800 Rhododendron simsii HOM05D001732 ORTHO05D006715 1.1e-12 77.4 75 57.3
SHI43126 Sapria himalayana HOM05D001732 ORTHO05D006715 1.1e-12 77.4 76 63.2
CAN.G691.13 Capsicum annuum HOM05D001732 ORTHO05D006715 1.9e-12 76.6 70 60.0
Cfa007703 Carpinus fangiana HOM05D001732 ORTHO05D006715 1.9e-12 76.6 72 56.9
SGA_v2.0_scaffold236G43748 Striga asiatica HOM05D001732 ORTHO05D006715 1.9e-12 76.6 80 57.5
Gorai.007G379800 Gossypium raimondii HOM05D001732 ORTHO05D006715 2.4e-12 76.3 70 55.7
Phvul.002G058300 Phaseolus vulgaris HOM05D001732 ORTHO05D006715 2.4e-12 76.3 60 58.3
Solyc11g008730.2 Solanum lycopersicum HOM05D001732 ORTHO05D006715 2.4e-12 76.3 70 61.4
Sopen11g004510 Solanum pennellii HOM05D001732 ORTHO05D006715 2.4e-12 76.3 70 61.4
Gohir.D08G275600 Gossypium hirsutum HOM05D001732 ORTHO05D006715 3.2e-12 75.9 70 55.7
Lalb_Chr19g0139341 Lupinus albus HOM05D001732 ORTHO05D006715 3.2e-12 75.9 63 61.9
Haze_14372 Corylus avellana HOM05D001732 ORTHO05D006715 5.4e-12 75.1 72 55.6
Gohir.1Z049315 Gossypium hirsutum HOM05D001732 ORTHO05D006715 5.4e-12 75.1 79 51.9
Gohir.A01G232000 Gossypium hirsutum HOM05D001732 ORTHO05D006715 5.4e-12 75.1 79 51.9
Gohir.D02G000300 Gossypium hirsutum HOM05D001732 ORTHO05D006715 5.4e-12 75.1 79 51.9
Gohir.D08G006900 Gossypium hirsutum HOM05D001732 ORTHO05D006715 5.4e-12 75.1 79 51.9
Gorai.005G000800 Gossypium raimondii HOM05D001732 ORTHO05D006715 5.4e-12 75.1 79 51.9
Gorai.009G456200 Gossypium raimondii HOM05D001732 ORTHO05D006715 5.4e-12 75.1 79 51.9
Nitab4.5_0005243g0020 Nicotiana tabacum HOM05D001732 ORTHO05D006715 7.1e-12 74.7 70 60.0
Sed0004106 Sechium edule HOM05D001732 ORTHO05D006715 9.3e-12 74.3 66 57.6
VMungo1215G0739 Vigna mungo HOM05D001732 ORTHO05D006715 9.3e-12 74.3 58 58.6
PGR031G2961 Punica granatum HOM05D001732 ORTHO05D006715 1.2e-11 73.9 64 56.2
PGSC0003DMG402016244 Solanum tuberosum HOM05D001732 ORTHO05D006715 1.2e-11 73.9 75 58.7
Ca_03030_v3 Cicer arietinum L. HOM05D001732 ORTHO05D006715 2.1e-11 73.2 57 66.7
Nitab4.5_0000743g0150 Nicotiana tabacum HOM05D001732 ORTHO05D006715 2.1e-11 73.2 76 53.9
DCAR_016903 Daucus carota HOM05D001732 ORTHO05D006715 2.7e-11 72.8 77 55.8
Gohir.1Z049638 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.7e-11 72.8 79 50.6
Gohir.A11G330000 Gossypium hirsutum HOM05D001732 ORTHO05D006715 2.7e-11 72.8 79 51.9
CANSAT25G2855 Cannabis sativa HOM05D001732 ORTHO05D006715 3.5e-11 72.4 79 51.9
Medtr4g074450 Medicago truncatula HOM05D001732 ORTHO05D006715 3.5e-11 72.4 65 58.5
Medtr4g108000 Medicago truncatula HOM05D003598 ORTHO05D004198 4.6e-11 72.0 70 55.7
TPR.G32336 Trifolium pratense HOM05D001732 ORTHO05D006715 4.6e-11 72.0 62 62.9
AagrBONN_evm.TU.Sc2ySwM_340.241 Anthoceros agrestis HOM05D001732 ORTHO05D006715 6.0e-11 71.6 61 50.8
Gorai.004G294300 Gossypium raimondii HOM05D001732 ORTHO05D006715 7.9e-11 71.2 48 70.8
Mapoly0095s0017 Marchantia polymorpha HOM05D001732 ORTHO05D006715 1.0e-10 70.9 65 50.8
AagrBONN_evm.TU.Sc2ySwM_117.2831 Anthoceros agrestis HOM05D001732 ORTHO05D006715 1.3e-10 70.5 61 50.8
HanXRQChr08g0215241 Helianthus annuus HOM05D001732 ORTHO05D006715 1.3e-10 70.5 59 55.9
Psat6g203000 Pisum sativum HOM05D001732 ORTHO05D006715 2.3e-10 69.7 63 60.3
Gohir.A13G000800 Gossypium hirsutum HOM05D001732 ORTHO05D006715 6.6e-10 68.2 79 48.1
BcaB03g14675 Brassica carinata HOM05D001732 ORTHO05D006715 1.1e-09 67.4 59 50.8
A03p35490 Brassica napus HOM05D001732 ORTHO05D006715 1.1e-09 67.4 59 50.8
C03p43150 Brassica napus HOM05D001732 ORTHO05D006715 1.1e-09 67.4 59 50.8
BolC3t16584H Brassica oleracea HOM05D001732 ORTHO05D006715 1.1e-09 67.4 59 50.8
BraA03t12726Z Brassica rapa HOM05D001732 ORTHO05D006715 1.1e-09 67.4 59 50.8
CARHR082580 Cardamine hirsuta HOM05D001732 ORTHO05D006715 1.1e-09 67.4 54 57.4
Gohir.1Z049365 Gossypium hirsutum HOM05D001732 ORTHO05D006715 1.1e-09 67.4 79 48.1
Gohir.A08G000020 Gossypium hirsutum HOM05D001732 ORTHO05D006715 1.1e-09 67.4 79 48.1
BcaB03g14676 Brassica carinata HOM05D001732 ORTHO05D006715 1.5e-09 67.0 59 49.2
THA.LOC104809864 Tarenaya hassleriana HOM05D001732 ORTHO05D006715 1.5e-09 67.0 60 48.3
Aa31LG5G18420 Aethionema arabicum HOM05D001732 ORTHO05D006715 1.9e-09 66.6 60 48.3
Actinidia29773 Actinidia chinensis HOM05D001732 ORTHO05D006715 2.5e-09 66.2 83 45.8
AT3G07860 Arabidopsis thaliana HOM05D001732 ORTHO05D006715 2.5e-09 66.2 59 50.8
AL3G19230 Arabidopsis lyrata HOM05D001732 ORTHO05D006715 3.3e-09 65.9 59 50.8
Carub.0003s0744 Capsella rubella HOM05D001732 ORTHO05D006715 3.3e-09 65.9 59 50.8
Thhalv10021648m.g Eutrema salsugineum HOM05D001732 ORTHO05D006715 3.3e-09 65.9 60 48.3
Oeu017913.1 Olea europaea HOM05D001732 ORTHO05D006715 3.3e-09 65.9 45 68.9
Sp3g06780 Schrenkiella parvula HOM05D001732 ORTHO05D006715 4.3e-09 65.5 59 49.2
Aqoxy2G01192 Aquilegia oxysepala HOM05D001732 ORTHO05D006715 5.6e-09 65.1 66 54.5
C02p36660 Brassica napus HOM05D001732 ORTHO05D006715 9.6e-09 64.3 68 47.1
unitig_0.g2094 Utricularia gibba HOM05D000560 ORTHO05D000417 9.6e-09 64.3 83 44.6
BcaC07g41028 Brassica carinata HOM05D001732 ORTHO05D006715 2.1e-08 63.2 62 50.0
BcaC03g15897 Brassica carinata HOM05D001732 ORTHO05D006715 2.8e-08 62.8 56 48.2
Pp3c18_13370 Physcomitrium patens HOM05D001732 ORTHO05D006715 8.1e-08 61.2 59 40.7
BcaB06g26153 Brassica carinata HOM05D001732 ORTHO05D006715 2.4e-07 59.7 53 50.9
C07p09830 Brassica napus HOM05D001732 ORTHO05D006715 2.4e-07 59.7 99 37.4
CBR_g49713 Chara braunii HOM05D006523 ORTHO05D008212 3.1e-07 59.3 51 52.9
CBR_g48797 Chara braunii HOM05D001732 ORTHO05D006715 1.5e-06 57.0 51 49.0
BcaC06g35903 Brassica carinata HOM05D001732 ORTHO05D006715 4.5e-06 55.5 69 43.5


User provided reference genes

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