Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g39930_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D005509 3.6e-126 454.9 227 100.0
MBI08_g29141_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D005509 2.2e-30 136.7 123 64.2
Os02g0101500 Oryza sativa ssp. japonica HOM05D000212 ORTHO05D005509 3.8e-27 125.9 122 59.8
Zm00001eb229250 Zea mays HOM05D000212 ORTHO05D005509 8.5e-27 124.8 122 59.0
CARHR060660 Cardamine hirsuta HOM05D000212 ORTHO05D005509 1.9e-26 123.6 132 53.8
Oeu005702.1 Olea europaea HOM05D000212 ORTHO05D005509 1.9e-26 123.6 125 55.2
unitig_899.g15611 Utricularia gibba HOM05D000212 ORTHO05D005509 3.2e-26 122.9 122 57.4
Cc09_g10170 Coffea canephora HOM05D000212 ORTHO05D005509 5.5e-26 122.1 125 53.6
CDE04G1730 Ceratophyllum demersum HOM05D000212 ORTHO05D005509 7.2e-26 121.7 122 56.6
Thhalv10018534m.g Eutrema salsugineum HOM05D000212 ORTHO05D005509 7.2e-26 121.7 122 55.7
Dinv14109 Davidia involucrata HOM05D000212 ORTHO05D005509 9.4e-26 121.3 123 53.7
Solyc01g111630.3 Solanum lycopersicum HOM05D000212 ORTHO05D005509 1.2e-25 120.9 122 54.9
Sopen01g053670 Solanum pennellii HOM05D000212 ORTHO05D005509 1.2e-25 120.9 122 54.9
PGSC0003DMG400006186 Solanum tuberosum HOM05D000212 ORTHO05D005509 1.2e-25 120.9 122 54.9
AL2G26910 Arabidopsis lyrata HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
BcaB03g15139 Brassica carinata HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
BcaB03g15394 Brassica carinata HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
BcaC08g46003 Brassica carinata HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
BcaNung05109 Brassica carinata HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
A07p34520 Brassica napus HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 1.6e-25 120.6 122 54.9
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
Carub.0002s1449 Capsella rubella HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
CDE02G3685 Ceratophyllum demersum HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 56.6
Sp5g23030 Schrenkiella parvula HOM05D000212 ORTHO05D005509 1.6e-25 120.6 122 54.9
AT1G68010 Arabidopsis thaliana HOM05D000212 ORTHO05D005509 2.1e-25 120.2 122 54.9
Thecc.02G059100 Theobroma cacao HOM05D000212 ORTHO05D005509 2.1e-25 120.2 122 54.1
Nitab4.5_0000283g0400 Nicotiana tabacum HOM05D000212 ORTHO05D005509 2.7e-25 119.8 135 52.6
Nitab4.5_0003914g0050 Nicotiana tabacum HOM05D000212 ORTHO05D005509 2.7e-25 119.8 135 52.6
Prupe.8G166000 Prunus persica HOM05D000212 ORTHO05D005509 2.7e-25 119.8 122 54.9
BcaC08g46227 Brassica carinata HOM05D000212 ORTHO05D005509 3.6e-25 119.4 127 52.8
CAN.G588.84 Capsicum annuum HOM05D000212 ORTHO05D005509 3.6e-25 119.4 131 54.2
PSO541G1525 Papaver somniferum HOM05D000212 ORTHO05D005509 3.6e-25 119.4 122 55.7
PSO675G7560 Papaver somniferum HOM05D000212 ORTHO05D005509 3.6e-25 119.4 122 55.7
Sabra04G0117700 Salix brachista HOM05D000212 ORTHO05D005509 3.6e-25 119.4 131 51.1
Aqoxy6G02140 Aquilegia oxysepala HOM05D000212 ORTHO05D005509 4.7e-25 119.0 122 54.1
CiPaw.05G082600 Carya illinoinensis HOM05D000212 ORTHO05D005509 4.7e-25 119.0 122 55.7
MD05G1122100 Malus domestica HOM05D000212 ORTHO05D005509 4.7e-25 119.0 122 54.9
TAR381G1304 Trochodendron aralioides HOM05D000212 ORTHO05D005509 4.7e-25 119.0 122 54.1
Duzib132G0804 Durio zibethinus HOM05D000212 ORTHO05D005509 6.1e-25 118.6 122 54.9
Gohir.D01G160100 Gossypium hirsutum HOM05D000212 ORTHO05D005509 6.1e-25 118.6 122 55.7
Gorai.002G198600 Gossypium raimondii HOM05D000212 ORTHO05D005509 6.1e-25 118.6 122 55.7
Gohir.A01G169100 Gossypium hirsutum HOM05D000212 ORTHO05D005509 8.0e-25 118.2 122 55.7
Potri.004G175800 Populus trichocarpa HOM05D000212 ORTHO05D005509 8.0e-25 118.2 122 54.9
vmacro17343 Vaccinium macrocarpon HOM05D000212 ORTHO05D005509 8.0e-25 118.2 127 50.4
Cpa.g.sc20.87 Carica papaya HOM05D000212 ORTHO05D005509 1.0e-24 117.9 122 53.3
Ciclev10028639m.g Citrus clementina HOM05D000212 ORTHO05D005509 1.0e-24 117.9 122 54.1
Prupe.7G264000 Prunus persica HOM05D000212 ORTHO05D005509 1.0e-24 117.9 122 54.1
MSTRG.5454 Avicennia marina HOM05D000212 ORTHO05D005509 1.4e-24 117.5 122 53.3
Cfa005249 Carpinus fangiana HOM05D000212 ORTHO05D005509 1.4e-24 117.5 122 54.9
FvH4_5g30340 Fragaria vesca HOM05D000212 ORTHO05D005509 1.4e-24 117.5 122 54.1
FAN08G0938 Fragaria x ananassa HOM05D000212 ORTHO05D005509 1.4e-24 117.5 122 54.1
FAN18G0770 Fragaria x ananassa HOM05D000212 ORTHO05D005509 1.4e-24 117.5 122 54.1
Peaxi162Scf00362g00646 Petunia axillaris HOM05D000212 ORTHO05D005509 1.4e-24 117.5 123 52.8
AUR62013028 Chenopodium quinoa HOM05D000212 ORTHO05D005509 1.8e-24 117.1 122 52.5
AUR62043666 Chenopodium quinoa HOM05D000212 ORTHO05D005509 1.8e-24 117.1 122 52.5
Hma1.2p1_0163F.1_g072510 Hydrangea macrophylla HOM05D000212 ORTHO05D005509 1.8e-24 117.1 122 52.5
Hma1.2p1_0163F.1_g072520 Hydrangea macrophylla HOM05D000212 ORTHO05D005509 1.8e-24 117.1 122 52.5
RcHm_v2.0_Chr7g0224761 Rosa chinensis HOM05D000212 ORTHO05D005509 1.8e-24 117.1 122 54.1
Dinv41936 Davidia involucrata HOM05D000212 ORTHO05D005509 2.3e-24 116.7 122 52.5
TWI79G0672 Tripterygium wilfordii HOM05D000212 ORTHO05D005509 2.3e-24 116.7 122 54.1
THA.LOC104807808 Tarenaya hassleriana HOM05D000212 ORTHO05D005509 3.0e-24 116.3 122 53.3
GSVIVG01024012001 Vitis vinifera HOM05D000212 ORTHO05D005509 3.0e-24 116.3 122 52.5
Manes.04G076300 Manihot esculenta HOM05D000212 ORTHO05D005509 4.0e-24 115.9 122 53.3
SalBow7G0649 Salvia bowleyana HOM05D000212 ORTHO05D005509 4.0e-24 115.9 131 50.4
SalBow7G2155 Salvia bowleyana HOM05D000212 ORTHO05D005509 4.0e-24 115.9 131 50.4
CANSAT25G2634 Cannabis sativa HOM05D000212 ORTHO05D005509 5.2e-24 115.5 122 50.8
PGR142G1333 Punica granatum HOM05D000212 ORTHO05D005509 5.2e-24 115.5 122 53.3
Hund00191 Selenicereus undatus HOM05D000212 ORTHO05D005509 5.2e-24 115.5 122 50.8
EL10Ac9g21375 Beta vulgaris HOM05D000212 ORTHO05D005509 6.8e-24 115.2 122 51.6
ECA246G1556 Erigeron canadensis HOM05D000212 ORTHO05D005509 6.8e-24 115.2 122 53.3
CSS0004363 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D005509 8.8e-24 114.8 122 51.6
Nn5g30798 Nelumbo nucifera HOM05D000212 ORTHO05D005509 8.8e-24 114.8 121 52.1
Sc08g0002900 Simmondsia chinensis HOM05D000212 ORTHO05D005509 8.8e-24 114.8 122 51.6
HPP92_022190 Vanilla planifolia HOM05D000212 ORTHO05D005509 8.8e-24 114.8 122 54.9
DCAR_022947 Daucus carota HOM05D000212 ORTHO05D005509 1.5e-23 114.0 122 51.6
Eucgr.I01423 Eucalyptus grandis HOM05D000212 ORTHO05D005509 1.5e-23 114.0 122 51.6
SMO145G0129 Selaginella moellendorffii HOM05D000212 ORTHO05D005509 1.5e-23 114.0 122 53.3
Lj5C178T12 Lonicera japonica HOM05D000212 ORTHO05D005509 2.6e-23 113.2 135 48.9
Lalb_Chr21g0306931 Lupinus albus HOM05D000212 ORTHO05D005509 4.4e-23 112.5 122 51.6
TPR.G36351 Trifolium pratense HOM05D000212 ORTHO05D005509 4.4e-23 112.5 122 51.6
Actinidia21457 Actinidia chinensis HOM05D000212 ORTHO05D005509 5.7e-23 112.1 122 51.6
HanXRQChr17g0544201 Helianthus annuus HOM05D000212 ORTHO05D005509 5.7e-23 112.1 122 51.6
Medtr1g112510 Medicago truncatula HOM05D000212 ORTHO05D005509 7.5e-23 111.7 122 51.6
Sed0017644 Sechium edule HOM05D000212 ORTHO05D005509 9.8e-23 111.3 122 50.8
Lsat_1_v5_gn_3_46860 Lactuca sativa HOM05D000212 ORTHO05D005509 1.3e-22 110.9 122 50.8
Lalb_Chr02g0143391 Lupinus albus HOM05D000212 ORTHO05D005509 1.3e-22 110.9 122 50.8
CsaV3_7G001060 Cucumis sativus L. HOM05D000212 ORTHO05D005509 2.2e-22 110.2 122 50.0
VMungo0720G0733 Vigna mungo HOM05D000212 ORTHO05D005509 2.2e-22 110.2 122 50.8
Glyma.10G281400 Glycine max HOM05D000212 ORTHO05D005509 3.7e-22 109.4 122 50.8
Rhsim05G0056500 Rhododendron simsii HOM05D000212 ORTHO05D005509 3.7e-22 109.4 151 47.0
ATR0180G008 Amborella trichopoda HOM05D000212 ORTHO05D005509 4.9e-22 109.0 121 52.9
arahy.Tifrunner.gnm1.ann1.71EHKP Arachis hypogaea HOM05D000212 ORTHO05D005509 4.9e-22 109.0 134 45.5
Haze_02134 Corylus avellana HOM05D000212 ORTHO05D005509 4.9e-22 109.0 117 53.8
Pp3c19_20080 Physcomitrium patens HOM05D000212 ORTHO05D005509 4.9e-22 109.0 122 51.6
FAN13G2675 Fragaria x ananassa HOM05D000212 ORTHO05D005509 6.3e-22 108.6 118 52.5
Pp3c18_12500 Physcomitrium patens HOM05D000212 ORTHO05D005509 6.3e-22 108.6 123 50.4
THA.LOC104824763 Tarenaya hassleriana HOM05D000212 ORTHO05D005509 6.3e-22 108.6 122 49.2
Glyma.20G107800 Glycine max HOM05D000212 ORTHO05D005509 1.4e-21 107.5 122 50.0
Mapoly0015s0044 Marchantia polymorpha HOM05D000212 ORTHO05D005509 1.4e-21 107.5 122 50.8
Ca_11207_v3 Cicer arietinum L. HOM05D000212 ORTHO05D005509 2.4e-21 106.7 122 49.2
Phvul.007G019300 Phaseolus vulgaris HOM05D000212 ORTHO05D005509 2.4e-21 106.7 122 49.2
Lj5g0017900 Lotus japonicus HOM05D000212 ORTHO05D005509 3.1e-21 106.3 122 48.4
Psat6g231880 Pisum sativum HOM05D000212 ORTHO05D005509 3.1e-21 106.3 122 48.4
ClCG02G004060 Citrullus lanatus HOM05D000212 ORTHO05D005509 4.1e-21 105.9 166 41.0
Lalb_Chr06g0163651 Lupinus albus HOM05D000212 ORTHO05D005509 5.4e-21 105.5 123 48.0
CBR_g49204 Chara braunii HOM05D000212 ORTHO05D005509 7.0e-21 105.1 122 50.8
SalBow1G2308 Salvia bowleyana HOM05D000212 ORTHO05D005509 1.6e-20 104.0 127 48.8
AagrBONN_evm.TU.Sc2ySwM_117.3207 Anthoceros agrestis HOM05D000212 ORTHO05D005509 4.5e-20 102.4 122 48.4
Aa31LG11G2730 Aethionema arabicum HOM05D000212 ORTHO05D005509 1.7e-19 100.5 122 49.2
CAN.G798.47 Capsicum annuum HOM05D000212 ORTHO05D005509 9.5e-18 94.7 151 43.0
MELO3C013350.2 Cucumis melo HOM05D000212 ORTHO05D005509 1.6e-17 94.0 140 41.4
MBI15_g00259_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D005509 1.4e-16 90.9 96 56.2
CiPaw.06G121600 Carya illinoinensis HOM05D000212 ORTHO05D005509 1.8e-16 90.5 85 51.8
CAN.G426.19 Capsicum annuum HOM05D000212 ORTHO05D005509 8.9e-16 88.2 141 41.8
COL.COLO4_17344 Corchorus olitorius HOM05D000212 ORTHO05D005509 1.2e-15 87.8 97 51.5
SGA_v2.0_scaffold207G41924 Striga asiatica HOM05D000212 ORTHO05D005509 1.2e-15 87.8 96 54.2
Cre06.g295450 Chlamydomonas reinhardtii HOM05D000212 ORTHO05D005509 3.4e-15 86.3 116 44.8
Ah.01g023040 Amaranthus hybridus HOM05D000212 ORTHO05D005509 1.3e-14 84.3 122 44.3
PRCOL_00005045 Prasinoderma coloniale HOM05D000212 ORTHO05D005509 1.7e-14 84.0 116 41.4
QL11p050728 Quercus lobata HOM05D000212 ORTHO05D005509 3.7e-14 82.8 101 48.5
Ah.01g008420 Amaranthus hybridus HOM05D000212 ORTHO05D005509 4.9e-14 82.4 120 44.2
CAN.G1040.7 Capsicum annuum HOM05D000212 ORTHO05D005509 1.4e-13 80.9 118 44.1
C02p23760 Brassica napus HOM05D000212 ORTHO05D005509 7.0e-13 78.6 74 60.8
CAN.G1181.28 Capsicum annuum HOM05D000212 ORTHO05D005509 1.2e-12 77.8 101 47.5
CAN.G1305.30 Capsicum annuum HOM05D000212 ORTHO05D005509 1.2e-12 77.8 98 49.0
BolC2t08505H Brassica oleracea HOM05D000212 ORTHO05D005509 7.8e-12 75.1 83 54.2
Cpa.g.sc20.88 Carica papaya HOM05D000212 ORTHO05D005509 3.0e-11 73.2 71 54.9
Migut.N01323 Erythranthe guttata HOM05D000212 ORTHO05D005509 1.1e-10 71.2 91 47.3
arahy.Tifrunner.gnm1.ann1.KVXN1E Arachis hypogaea HOM05D000212 ORTHO05D005509 3.3e-10 69.7 92 44.6
Hund28420 Selenicereus undatus HOM05D000212 ORTHO05D005509 2.8e-09 66.6 81 45.7
Hund28422 Selenicereus undatus HOM05D000212 ORTHO05D005509 2.8e-09 66.6 81 45.7
Haze_23674 Corylus avellana HOM05D000212 ORTHO05D030821 3.6e-09 66.2 79 46.8
Hund01460 Selenicereus undatus HOM05D000212 ORTHO05D005509 1.4e-08 64.3 81 44.4
BraA02t06533Z Brassica rapa HOM05D000212 ORTHO05D005509 1.2e-07 61.2 65 53.8
MBI09_g23040_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D240862 2.2e-06 57.0 30 90.0
Atru.chr5.3323 Acer truncatum HOM05D000212 ORTHO05D005509 4.9e-06 55.8 35 71.4


User provided reference genes

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