Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g18764_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 1.6e-208 729.2 373 100.0
MBI15_g19421_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D005115 5.4e-87 325.5 164 95.1
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 3.0e-53 213.4 169 64.5
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 2.2e-48 197.2 169 61.5
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 3.8e-48 196.4 169 60.4
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 1.6e-46 191.0 169 59.8
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 2.1e-46 190.7 169 58.6
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 3.6e-46 189.9 169 59.2
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 3.9e-45 186.4 169 55.6
MBI12_g24829_MAGBIO Magnolia biondii HOM05D003492 ORTHO05D011152 6.3e-43 179.1 109 80.7
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 6.3e-43 179.1 169 56.2
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 5.3e-42 176.0 173 54.3
Actinidia13945 Actinidia chinensis HOM05D003492 ORTHO05D005115 9.1e-42 175.3 169 55.0
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 9.1e-42 175.3 169 53.8
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 9.1e-42 175.3 169 53.8
Oeu049666.1 Olea europaea HOM05D003492 ORTHO05D005115 4.5e-41 172.9 170 56.5
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 5.9e-41 172.6 167 56.9
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 7.7e-41 172.2 173 52.0
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 1.3e-40 171.4 169 55.0
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 2.2e-40 170.6 169 52.7
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 3.8e-40 169.9 169 52.7
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 5.0e-40 169.5 170 52.9
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 5.0e-40 169.5 170 54.1
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 8.5e-40 168.7 169 52.7
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 1.1e-39 168.3 168 51.8
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 1.1e-39 168.3 169 53.8
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 4.2e-39 166.4 168 50.0
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 5.5e-39 166.0 168 50.0
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 5.5e-39 166.0 168 50.0
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 5.5e-39 166.0 168 50.0
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 5.5e-39 166.0 169 50.3
FAN03G1608 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.2e-38 164.9 162 52.5
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.2e-38 164.9 169 49.1
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 2.1e-38 164.1 170 52.4
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 2.1e-38 164.1 169 49.7
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 2.7e-38 163.7 169 51.5
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 3.6e-38 163.3 175 52.6
CiPaw.01G300100 Carya illinoinensis HOM05D003492 ORTHO05D005115 4.7e-38 162.9 169 55.0
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.4e-37 161.4 169 50.3
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 1.4e-37 161.4 170 48.8
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 1.8e-37 161.0 168 47.6
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 3.0e-37 160.2 169 51.5
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 3.9e-37 159.8 170 52.9
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 1.1e-36 158.3 169 50.3
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 1.5e-36 157.9 168 48.2
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.0e-36 157.5 170 48.8
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 3.3e-36 156.8 168 54.2
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 5.7e-36 156.0 168 48.8
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 5.7e-36 156.0 168 50.0
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 9.7e-36 155.2 169 48.5
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 1.3e-35 154.8 169 47.9
Cc02_g06280 Coffea canephora HOM05D003492 ORTHO05D005115 3.7e-35 153.3 169 49.7
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 4.8e-35 152.9 169 49.1
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 1.1e-34 151.8 183 46.4
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 1.4e-34 151.4 169 47.3
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 1.8e-34 151.0 169 51.5
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 3.1e-34 150.2 170 48.8
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 5.3e-34 149.4 168 45.8
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 7.0e-34 149.1 169 50.9
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 9.1e-34 148.7 168 45.8
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 2.0e-33 147.5 169 46.2
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 2.0e-33 147.5 174 48.9
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 2.6e-33 147.1 169 46.2
Peaxi162Scf00284g00912 Petunia axillaris HOM05D003492 ORTHO05D005115 3.4e-33 146.7 169 49.1
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 1.0e-32 145.2 170 47.1
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 1.3e-32 144.8 170 47.6
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 6.5e-32 142.5 169 46.2
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 8.5e-32 142.1 169 47.9
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 1.9e-31 141.0 165 47.9
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 4.2e-31 139.8 169 46.2
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 2.1e-30 137.5 170 45.9
CAN.G1782.1 Capsicum annuum HOM05D003492 ORTHO05D005115 4.7e-30 136.3 171 42.7
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 4.7e-30 136.3 164 47.0
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 1.4e-29 134.8 164 45.1
MBI01_g42372_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 6.7e-29 132.5 146 49.3
CAN.G78.68 Capsicum annuum HOM05D003492 ORTHO05D005115 1.1e-28 131.7 169 42.6
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 3.3e-28 130.2 169 46.7
Lsat_1_v5_gn_2_57160 Lactuca sativa HOM05D003492 ORTHO05D022499 3.3e-28 130.2 155 47.7
SHI03333 Sapria himalayana HOM05D003492 ORTHO05D005115 4.4e-28 129.8 170 44.7
Psat3g009720 Pisum sativum HOM05D003492 ORTHO05D005540 2.2e-27 127.5 138 47.1
Hund28567 Selenicereus undatus HOM05D003492 ORTHO05D005115 4.8e-27 126.3 156 45.5
Hund29345 Selenicereus undatus HOM05D003492 ORTHO05D005115 4.8e-27 126.3 156 45.5
MBI15_g21768_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 8.2e-27 125.6 111 59.5
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 7.7e-25 119.0 171 40.4
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 7.7e-25 119.0 171 40.4
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 1.0e-24 118.6 166 41.6
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 1.7e-24 117.9 168 42.9
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 2.9e-24 117.1 175 41.7
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 2.9e-24 117.1 171 39.8
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 6.5e-24 115.9 168 42.3
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 1.9e-23 114.4 165 40.0
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 1.9e-23 114.4 165 40.0
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 7.2e-23 112.5 167 41.3
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 1.6e-22 111.3 178 43.3
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 1.6e-22 111.3 172 37.8
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 3.6e-22 110.2 165 39.4
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 3.6e-22 110.2 173 39.3
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 3.6e-22 110.2 169 40.8
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 4.7e-22 109.8 172 37.2
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 6.1e-22 109.4 172 37.2
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 1.0e-21 108.6 163 39.3
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 1.8e-21 107.8 170 39.4
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 3.0e-21 107.1 168 39.9
SEGI_00595 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 4.0e-21 106.7 171 36.3
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 1.7e-19 101.3 176 36.4
MBI02_g36735_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D243340 3.7e-19 100.1 60 76.7
MBI07_g04034_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D011657 1.8e-18 97.8 81 61.7
MBI09_g03429_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 7.0e-18 95.9 69 73.9
MBI16_g08275_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D242272 1.7e-16 91.3 58 75.9
MBI15_g33744_MAGBIO Magnolia biondii HOM05D034376 ORTHO05D000116 3.8e-16 90.1 83 55.4
Psat5g059840 Pisum sativum HOM05D000434 ORTHO05D007220 8.5e-16 89.0 69 59.4
MBI03_g41541_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D011657 1.2e-14 85.1 60 71.7
MBI19_g12141_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 6.1e-14 82.8 80 53.8
Psat4g081200 Pisum sativum HOM05D003492 ORTHO05D000696 8.8e-13 79.0 61 62.3
MBI18_g15809_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.5e-12 78.2 60 66.7
Psat2g110320 Pisum sativum HOM05D003492 ORTHO05D005115 2.0e-12 77.8 158 36.7
MBI08_g25565_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 3.4e-12 77.0 72 52.8
MBI12_g42062_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D243366 3.4e-12 77.0 57 66.7
MBI12_g47415_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D244468 7.5e-12 75.9 54 64.8
MBI11_g09869_MAGBIO Magnolia biondii HOM05D011607 ORTHO05D000038 1.7e-11 74.7 60 61.7
MBI01_g03366_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D240439 2.8e-11 73.9 54 64.8
MBI15_g42793_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D011657 2.0e-09 67.8 57 57.9
MBI05_g20536_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D242100 7.7e-09 65.9 57 56.1
MBI17_g22142_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D011657 1.7e-08 64.7 44 70.5
MBI13_g13249_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D243765 5.0e-08 63.2 43 67.4
Lj8C65G6 Lonicera japonica HOM05D003492 ORTHO05D005115 1.1e-07 62.0 91 44.0
MBI09_g03202_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D011657 1.9e-07 61.2 44 68.2
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 2.5e-07 60.8 210 24.8
HPP92_012038 Vanilla planifolia HOM05D003492 ORTHO05D005115 3.3e-07 60.5 78 41.0
CAN.G78.73 Capsicum annuum HOM05D003492 ORTHO05D005115 7.2e-07 59.3 140 32.1
Lsat_1_v5_gn_0_22080 Lactuca sativa HOM05D005223 ORTHO05D006449 9.5e-07 58.9 47 53.2
MBI16_g13255_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D011657 9.5e-07 58.9 49 59.2
MBI04_g12751_MAGBIO Magnolia biondii HOM05D009068 ORTHO05D241542 1.6e-06 58.2 34 76.5


User provided reference genes

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