Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 1.5e-127 461.1 693 100.0
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 1.6e-39 168.7 489 77.9
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 7.3e-37 159.8 180 80.6
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.1e-36 158.3 180 77.8
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 5.8e-34 150.2 177 66.7
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.9e-33 147.9 175 48.0
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 8.4e-33 146.4 487 69.0
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 1.1e-32 146.0 620 64.5
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 1.4e-32 145.6 172 79.1
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 2.4e-32 144.8 471 27.0
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 2.4e-32 144.8 181 79.6
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 6.0e-31 140.2 207 47.3
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 6.0e-31 140.2 207 47.3
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 7.8e-31 139.8 162 46.3
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 2.3e-30 138.3 77 83.1
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 3.0e-30 137.9 77 80.5
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 3.9e-30 137.5 170 57.1
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 5.1e-30 137.1 77 81.8
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 6.6e-30 136.7 77 81.8
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 6.6e-30 136.7 77 80.5
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 8.7e-30 136.3 75 82.7
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 1.1e-29 136.0 77 80.5
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 1.9e-29 135.2 77 80.5
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 3.3e-29 134.4 73 84.9
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 4.3e-29 134.0 180 75.0
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 7.3e-29 133.3 180 76.1
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 9.6e-29 132.9 77 77.9
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 9.6e-29 132.9 179 75.4
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 9.6e-29 132.9 591 60.7
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 1.3e-28 132.5 160 44.4
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 3.6e-28 131.0 77 75.3
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 3.6e-28 131.0 176 72.2
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 4.8e-28 130.6 76 76.3
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 4.8e-28 130.6 77 76.6
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 4.8e-28 130.6 77 76.6
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 4.8e-28 130.6 77 77.9
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 4.8e-28 130.6 528 72.3
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 6.2e-28 130.2 175 74.3
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 6.2e-28 130.2 176 77.8
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.4e-27 129.0 76 76.3
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 1.4e-27 129.0 489 75.7
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 1.8e-27 128.6 636 65.6
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 2.4e-27 128.3 77 72.7
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 4.0e-27 127.5 71 81.7
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 4.0e-27 127.5 71 81.7
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 4.0e-27 127.5 77 74.0
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 1.5e-26 125.6 69 84.1
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 2.0e-26 125.2 71 81.7
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 2.0e-26 125.2 93 64.5
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 2.6e-26 124.8 136 50.0
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 2.6e-26 124.8 71 81.7
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 4.4e-26 124.0 136 66.2
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 5.8e-26 123.6 71 78.9
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 7.6e-26 123.2 147 48.3
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 7.6e-26 123.2 70 78.6
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 9.9e-26 122.9 75 74.7
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 1.3e-25 122.5 71 78.9
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 1.7e-25 122.1 77 71.4
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 2.9e-25 121.3 71 77.5
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 3.8e-25 120.9 68 82.4
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 6.4e-25 120.2 136 65.4
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 8.4e-25 119.8 72 76.4
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 8.4e-25 119.8 72 76.4
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 8.4e-25 119.8 91 63.7
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 1.4e-24 119.0 480 51.9
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 1.9e-24 118.6 70 74.3
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 1.9e-24 118.6 138 48.6
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 2.4e-24 118.2 71 77.5
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 2.4e-24 118.2 134 47.0
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 3.2e-24 117.9 134 47.0
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 5.4e-24 117.1 70 77.1
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 5.4e-24 117.1 177 36.7
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 1.6e-23 115.5 168 76.8
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 2.1e-23 115.2 65 78.5
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 2.1e-23 115.2 68 77.9
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 2.1e-23 115.2 173 54.9
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 2.7e-23 114.8 67 77.6
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 2.7e-23 114.8 67 77.6
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 2.7e-23 114.8 67 77.6
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 2.7e-23 114.8 67 77.6
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 4.6e-23 114.0 186 40.3
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 6.0e-23 113.6 173 56.1
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 7.9e-23 113.2 145 42.1
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 1.0e-22 112.8 93 59.1
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 3.0e-22 111.3 66 75.8
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 3.0e-22 111.3 175 37.7
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 6.6e-22 110.2 59 86.4
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.1e-21 109.4 93 54.8
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 1.5e-21 109.0 93 58.1
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 1.5e-21 109.0 87 59.8
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 3.3e-21 107.8 93 54.8
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 3.3e-21 107.8 93 57.0
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 4.3e-21 107.5 89 56.2
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 7.4e-21 106.7 89 55.1
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 7.4e-21 106.7 89 55.1
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 1.6e-20 105.5 77 63.6
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 8.4e-17 93.2 89 47.2
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 8.4e-17 93.2 89 47.2
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 7.1e-16 90.1 53 77.4
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 9.3e-16 89.7 87 49.4
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 3.3e-13 81.3 87 46.0
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 4.3e-13 80.9 178 34.8
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 4.0e-11 74.3 39 84.6
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.1e-08 66.2 47 74.5
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 1.4e-08 65.9 39 71.8


User provided reference genes

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