Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 4.5e-228 794.3 404 100.0
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 3.8e-134 482.3 341 76.0
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 3.9e-131 472.2 329 75.7
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 5.1e-131 471.9 333 74.2
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 5.1e-131 471.9 304 80.3
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 8.6e-131 471.1 302 80.1
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 1.2e-129 467.2 301 81.4
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 1.2e-129 467.2 301 81.4
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 1.6e-129 466.8 341 73.6
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 8.1e-129 464.5 343 74.3
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 2.4e-128 463.0 313 78.6
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 3.1e-128 462.6 327 74.3
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 9.0e-128 461.1 304 79.3
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 1.5e-127 460.3 300 79.7
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 2.0e-127 459.9 307 78.8
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 2.0e-127 459.9 300 79.3
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 2.6e-127 459.5 300 78.7
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 5.8e-127 458.4 324 75.3
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 2.2e-126 456.4 300 78.3
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 6.4e-126 454.9 347 70.6
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 6.4e-126 454.9 300 78.0
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 6.4e-126 454.9 300 79.7
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 1.1e-125 454.1 303 76.9
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 1.4e-125 453.8 295 79.7
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.4e-125 453.8 337 73.9
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 1.9e-125 453.4 304 79.9
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.9e-125 453.4 306 77.1
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 3.2e-125 452.6 296 78.4
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 4.2e-125 452.2 300 78.3
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 7.1e-125 451.4 338 72.2
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 7.1e-125 451.4 301 80.1
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 9.3e-125 451.1 295 78.3
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.6e-124 450.3 303 77.2
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.6e-124 450.3 303 77.2
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 2.7e-124 449.5 303 78.5
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 3.5e-124 449.1 341 71.0
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 3.5e-124 449.1 309 76.4
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 1.0e-123 447.6 303 76.2
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.3e-123 447.2 305 76.1
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.7e-123 446.8 298 78.2
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 2.3e-123 446.4 308 74.4
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 3.0e-123 446.0 304 76.0
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 3.0e-123 446.0 298 77.5
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 3.9e-123 445.7 298 78.2
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 3.9e-123 445.7 311 74.9
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.1e-123 445.3 286 80.1
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 6.6e-123 444.9 298 77.5
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 6.6e-123 444.9 305 76.4
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 6.6e-123 444.9 305 75.7
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 8.7e-123 444.5 304 76.0
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 8.7e-123 444.5 337 71.2
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 1.1e-122 444.1 298 77.5
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 1.9e-122 443.4 305 75.4
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.9e-122 443.4 306 76.1
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.5e-122 443.0 288 81.2
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 4.3e-122 442.2 334 70.1
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 7.3e-122 441.4 292 79.5
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 2.1e-121 439.9 309 72.8
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.6e-121 439.1 337 70.3
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 6.2e-121 438.3 301 73.4
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 8.1e-121 438.0 298 73.5
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 1.4e-120 437.2 298 74.2
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 1.8e-120 436.8 292 80.1
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 3.4e-119 432.6 300 72.7
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 4.5e-119 432.2 295 73.9
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 7.6e-119 431.4 298 73.2
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 7.6e-119 431.4 316 69.9
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 9.9e-119 431.0 296 74.0
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 9.9e-119 431.0 296 74.0
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 1.3e-118 430.6 381 63.8
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 1.7e-118 430.3 299 72.9
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 1.7e-118 430.3 299 72.9
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 2.2e-118 429.9 306 72.5
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 2.9e-118 429.5 326 68.1
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 3.8e-118 429.1 299 72.6
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 6.4e-118 428.3 313 74.1
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 7.9e-116 421.4 301 76.7
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 3.9e-115 419.1 305 75.1
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 1.5e-114 417.2 304 71.4
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 5.6e-114 415.2 329 69.0
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 9.6e-114 414.5 271 77.1
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 1.6e-113 413.7 329 68.7
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 6.2e-113 411.8 311 70.7
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 3.1e-112 409.5 304 72.0
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.1e-112 409.5 306 71.9
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 5.3e-112 408.7 303 70.0
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 5.3e-112 408.7 304 71.7
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 9.0e-112 407.9 304 71.7
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 9.0e-112 407.9 318 68.9
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 1.5e-111 407.1 304 71.7
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 4.5e-111 405.6 293 73.0
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 2.9e-110 402.9 301 68.8
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 3.8e-110 402.5 304 70.4
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 6.4e-110 401.7 306 69.9
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 1.4e-109 400.6 307 69.4
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 1.9e-109 400.2 263 76.8
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 2.4e-109 399.8 303 72.3
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 3.2e-109 399.4 299 70.9
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 5.5e-109 398.7 310 71.6
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 7.1e-109 398.3 333 67.0
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 1.6e-108 397.1 291 72.5
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 1.6e-108 397.1 263 77.6
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 3.5e-108 396.0 264 75.4
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 6.0e-108 395.2 290 72.1
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 7.9e-108 394.8 297 71.7
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.0e-107 394.4 304 69.1
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 3.0e-107 392.9 238 86.1
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 5.1e-107 392.1 303 71.0
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 5.1e-107 392.1 265 74.3
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 7.4e-106 388.3 296 70.6
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 2.1e-105 386.7 303 68.0
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 1.4e-104 384.0 307 66.8
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 1.8e-104 383.6 294 67.7
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 1.5e-103 380.6 356 61.2
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.9e-99 365.9 304 66.4
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 1.9e-98 363.6 250 74.4
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 5.9e-95 352.1 342 59.1
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 1.4e-93 347.4 296 62.8
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 1.1e-90 337.8 300 65.0
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 3.1e-88 329.7 252 67.1
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 3.1e-88 329.7 277 65.7
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 2.5e-85 320.1 252 64.7
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 2.2e-78 297.0 176 88.6
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 1.4e-75 287.7 267 57.3
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 1.6e-71 274.2 193 77.2
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 5.2e-67 259.2 273 56.4
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 2.2e-62 243.8 166 73.5
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 7.7e-55 218.8 159 73.6
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 1.3e-41 174.9 114 72.8
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 1.6e-39 167.9 102 83.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 8.9e-35 152.1 99 78.8
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 8.9e-35 152.1 99 78.8
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 1.6e-28 131.3 87 72.4
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 9.5e-21 105.5 220 38.6
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 1.5e-18 98.2 197 29.4
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 2.2e-17 94.4 59 76.3
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 1.2e-10 72.0 44 75.0


User provided reference genes

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