Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g03816_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 1.1e-110 403.3 208 100.0
MBI04_g40115_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 3.2e-28 129.4 72 90.3
arahy.Tifrunner.gnm1.ann1.66CB8L Arachis hypogaea HOM05D000811 ORTHO05D004743 3.9e-26 122.5 75 76.0
TAR625G0006 Trochodendron aralioides HOM05D000811 ORTHO05D004743 3.9e-26 122.5 75 78.7
Nn5g29274 Nelumbo nucifera HOM05D000811 ORTHO05D004743 5.1e-26 122.1 75 78.7
Haze_03791 Corylus avellana HOM05D000811 ORTHO05D004743 6.6e-26 121.7 75 77.3
MBI05_g26504_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 6.6e-26 121.7 66 92.4
MD08G1077500 Malus domestica HOM05D000811 ORTHO05D004743 6.6e-26 121.7 75 76.0
arahy.Tifrunner.gnm1.ann1.LCWP3I Arachis hypogaea HOM05D000811 ORTHO05D004743 1.1e-25 120.9 75 74.7
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 1.1e-25 120.9 75 77.3
MD04G1047200 Malus domestica HOM05D000811 ORTHO05D004743 1.1e-25 120.9 75 74.7
Cc07_g10610 Coffea canephora HOM05D000811 ORTHO05D004743 1.9e-25 120.2 84 70.2
Lsat_1_v5_gn_2_78761 Lactuca sativa HOM05D000811 ORTHO05D004743 1.9e-25 120.2 75 73.3
TAR381G1630 Trochodendron aralioides HOM05D000811 ORTHO05D004743 1.9e-25 120.2 75 77.3
TAR628G0680 Trochodendron aralioides HOM05D000811 ORTHO05D004743 1.9e-25 120.2 75 76.0
Prupe.1G202600 Prunus persica HOM05D000811 ORTHO05D004743 2.5e-25 119.8 75 76.0
TPR.G30057 Trifolium pratense HOM05D000811 ORTHO05D004743 2.5e-25 119.8 105 59.0
Cpa.g.sc6.231 Carica papaya HOM05D000811 ORTHO05D004743 3.3e-25 119.4 75 76.0
Dinv23445 Davidia involucrata HOM05D000586 ORTHO05D003356 4.3e-25 119.0 75 74.7
Lj4g0014424 Lotus japonicus HOM05D000811 ORTHO05D004743 4.3e-25 119.0 75 77.3
arahy.Tifrunner.gnm1.ann1.T1352T Arachis hypogaea HOM05D000811 ORTHO05D004743 5.6e-25 118.6 75 73.3
CDE05G3463 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 5.6e-25 118.6 105 58.1
Dinv40074 Davidia involucrata HOM05D000811 ORTHO05D004743 5.6e-25 118.6 75 74.7
Hund16485 Selenicereus undatus HOM05D000811 ORTHO05D004743 5.6e-25 118.6 105 56.2
Duzib264G0600 Durio zibethinus HOM05D000811 ORTHO05D004743 7.3e-25 118.2 75 74.7
Eucgr.J02408 Eucalyptus grandis HOM05D000811 ORTHO05D004743 7.3e-25 118.2 75 74.7
Medtr8g076070 Medicago truncatula HOM05D000811 ORTHO05D004743 7.3e-25 118.2 75 76.0
Potri.007G013400 Populus trichocarpa HOM05D000811 ORTHO05D004743 7.3e-25 118.2 75 73.3
HanXRQChr14g0441311 Helianthus annuus HOM05D000811 ORTHO05D004743 9.6e-25 117.9 75 72.0
Ca_22371_v3 Cicer arietinum L. HOM05D000811 ORTHO05D004743 1.2e-24 117.5 75 76.0
TAR376G0878 Trochodendron aralioides HOM05D000811 ORTHO05D004743 1.2e-24 117.5 75 73.3
Aa31LG8G15220 Aethionema arabicum HOM05D000811 ORTHO05D004743 1.6e-24 117.1 91 61.5
Lalb_Chr05g0229881 Lupinus albus HOM05D000811 ORTHO05D004743 1.6e-24 117.1 75 72.0
Lalb_Chr16g0391191 Lupinus albus HOM05D000811 ORTHO05D004743 1.6e-24 117.1 75 73.3
Psat4g098480 Pisum sativum HOM05D000811 ORTHO05D004743 1.6e-24 117.1 105 58.1
Dinv33618 Davidia involucrata HOM05D000811 ORTHO05D004743 2.1e-24 116.7 75 73.3
Nn6g32304 Nelumbo nucifera HOM05D000811 ORTHO05D004743 2.1e-24 116.7 75 73.3
TWI09G0609 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 2.1e-24 116.7 75 72.0
Dinv41989 Davidia involucrata HOM05D000586 ORTHO05D003356 2.8e-24 116.3 75 73.3
ECA246G0760 Erigeron canadensis HOM05D000811 ORTHO05D004743 2.8e-24 116.3 75 70.7
Manes.02G103000 Manihot esculenta HOM05D000811 ORTHO05D004743 3.6e-24 115.9 75 70.7
Sabra07G0010400 Salix brachista HOM05D000811 ORTHO05D004743 3.6e-24 115.9 72 75.0
AUR62043613 Chenopodium quinoa HOM05D000811 ORTHO05D004743 4.7e-24 115.5 105 55.2
AUR62044455 Chenopodium quinoa HOM05D000811 ORTHO05D004743 4.7e-24 115.5 105 55.2
ECA238G1572 Erigeron canadensis HOM05D000811 ORTHO05D004743 4.7e-24 115.5 75 70.7
PGR102G1785 Punica granatum HOM05D000811 ORTHO05D004743 4.7e-24 115.5 75 72.0
QL06p033570 Quercus lobata HOM05D000811 ORTHO05D004743 4.7e-24 115.5 75 72.0
Thecc.01G020900 Theobroma cacao HOM05D000811 ORTHO05D004743 4.7e-24 115.5 75 70.7
VMungo0289G0001 Vigna mungo HOM05D000811 ORTHO05D004743 4.7e-24 115.5 75 69.3
CSS0030860 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 6.2e-24 115.2 75 69.3
Glyma.02G049500 Glycine max HOM05D000811 ORTHO05D004743 6.2e-24 115.2 75 70.7
Glyma.16G129900 Glycine max HOM05D000811 ORTHO05D004743 6.2e-24 115.2 75 70.7
Lsat_1_v5_gn_3_74081 Lactuca sativa HOM05D000811 ORTHO05D004743 6.2e-24 115.2 75 69.3
Manes.01G144800 Manihot esculenta HOM05D000811 ORTHO05D004743 6.2e-24 115.2 75 73.3
CSS0015066 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 8.1e-24 114.8 75 72.0
CSS0031839 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 8.1e-24 114.8 75 72.0
CiPaw.08G132800 Carya illinoinensis HOM05D000811 ORTHO05D004743 8.1e-24 114.8 75 73.3
COL.COLO4_21930 Corchorus olitorius HOM05D000811 ORTHO05D004743 8.1e-24 114.8 75 72.0
Duzib187G1507 Durio zibethinus HOM05D000811 ORTHO05D004743 8.1e-24 114.8 75 70.7
Gohir.D11G044800 Gossypium hirsutum HOM05D000811 ORTHO05D004743 8.1e-24 114.8 75 70.7
Lj4A217G58 Lonicera japonica HOM05D000811 ORTHO05D004743 8.1e-24 114.8 75 70.7
Duzib147G0350 Durio zibethinus HOM05D000811 ORTHO05D004743 1.1e-23 114.4 75 70.7
CDE05G3063 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 1.4e-23 114.0 75 70.7
Hma1.2p1_0258F.1_g104200 Hydrangea macrophylla HOM05D000811 ORTHO05D004743 1.4e-23 114.0 75 69.3
Nitab4.5_0001133g0070 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.4e-23 114.0 75 70.7
HanXRQChr15g0482841 Helianthus annuus HOM05D000811 ORTHO05D004743 1.8e-23 113.6 75 70.7
TWI53G1676 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 1.8e-23 113.6 75 70.7
CAN.G1329.5 Capsicum annuum HOM05D000811 ORTHO05D004743 2.4e-23 113.2 105 54.3
ClCG07G008440 Citrullus lanatus HOM05D000811 ORTHO05D004743 2.4e-23 113.2 75 70.7
Gorai.007G048100 Gossypium raimondii HOM05D000811 ORTHO05D004743 2.4e-23 113.2 75 70.7
SGA_v2.0_scaffold32G13256 Striga asiatica HOM05D000811 ORTHO05D004743 2.4e-23 113.2 75 72.0
vmacro18420 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 2.4e-23 113.2 75 70.7
EL10As8g23839 Beta vulgaris HOM05D000811 ORTHO05D004743 3.1e-23 112.8 105 52.4
Hund14039 Selenicereus undatus HOM05D000811 ORTHO05D004743 3.1e-23 112.8 77 68.8
PGSC0003DMG400001617 Solanum tuberosum HOM05D000811 ORTHO05D004743 3.1e-23 112.8 75 68.0
Ah.03g141760 Amaranthus hybridus HOM05D000811 ORTHO05D004743 4.0e-23 112.5 105 53.3
ATR0147G012 Amborella trichopoda HOM05D000811 ORTHO05D004743 4.0e-23 112.5 75 68.0
Nitab4.5_0006862g0010 Nicotiana tabacum HOM05D000811 ORTHO05D004743 4.0e-23 112.5 75 69.3
Phvul.003G260800 Phaseolus vulgaris HOM05D000811 ORTHO05D004743 5.3e-23 112.1 105 52.4
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 5.3e-23 112.1 75 70.7
MELO3C016378.2 Cucumis melo HOM05D000811 ORTHO05D004743 6.9e-23 111.7 75 69.3
Oeu035303.1 Olea europaea HOM05D000811 ORTHO05D004743 6.9e-23 111.7 75 72.0
Solyc01g110530.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 6.9e-23 111.7 75 68.0
Sopen01g052660 Solanum pennellii HOM05D000811 ORTHO05D004743 6.9e-23 111.7 75 68.0
Actinidia27847 Actinidia chinensis HOM05D000811 ORTHO05D004743 9.0e-23 111.3 75 70.7
Peaxi162Scf00362g01151 Petunia axillaris HOM05D000811 ORTHO05D004743 9.0e-23 111.3 72 70.8
Aqoxy5G01449 Aquilegia oxysepala HOM05D000811 ORTHO05D004743 1.2e-22 110.9 75 68.0
Ciclev10026785m.g Citrus clementina HOM05D000811 ORTHO05D004743 1.2e-22 110.9 75 68.0
CsaV3_4G005720 Cucumis sativus L. HOM05D000811 ORTHO05D004743 1.2e-22 110.9 75 69.3
Sc16g0002050 Simmondsia chinensis HOM05D000811 ORTHO05D004743 1.2e-22 110.9 75 69.3
SGA_v2.0_scaffold58G20433 Striga asiatica HOM05D000811 ORTHO05D004743 1.2e-22 110.9 75 69.3
MSTRG.5435 Avicennia marina HOM05D000811 ORTHO05D004743 1.5e-22 110.5 75 69.3
CiPaw.07G057300 Carya illinoinensis HOM05D000811 ORTHO05D004743 2.6e-22 109.8 75 69.3
Gohir.A10G097900 Gossypium hirsutum HOM05D000811 ORTHO05D004743 2.6e-22 109.8 75 69.3
Gohir.A11G041500 Gossypium hirsutum HOM05D000811 ORTHO05D004743 2.6e-22 109.8 73 68.5
Gohir.D10G090300 Gossypium hirsutum HOM05D000811 ORTHO05D004743 2.6e-22 109.8 75 69.3
Gorai.011G099300 Gossypium raimondii HOM05D000811 ORTHO05D004743 2.6e-22 109.8 75 69.3
HanXRQChr11g0327321 Helianthus annuus HOM05D000811 ORTHO05D004743 2.6e-22 109.8 75 66.7
A07p02600 Brassica napus HOM05D000811 ORTHO05D004743 3.4e-22 109.4 75 68.0
FAN09G3320 Fragaria x ananassa HOM05D000811 ORTHO05D004743 3.4e-22 109.4 75 69.3
Sed0008902 Sechium edule HOM05D000811 ORTHO05D004743 3.4e-22 109.4 75 68.0
THA.LOC104819758 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 3.4e-22 109.4 75 68.0
RcHm_v2.0_Chr3g0483651 Rosa chinensis HOM05D000811 ORTHO05D004743 4.4e-22 109.0 75 68.0
BcaB08g34786 Brassica carinata HOM05D000811 ORTHO05D004743 5.8e-22 108.6 75 66.7
BraA07t28059Z Brassica rapa HOM05D000811 ORTHO05D004743 5.8e-22 108.6 75 68.0
Thhalv10022913m.g Eutrema salsugineum HOM05D000811 ORTHO05D004743 5.8e-22 108.6 75 66.7
Sed0024520 Sechium edule HOM05D000811 ORTHO05D004743 5.8e-22 108.6 75 66.7
C06p13450 Brassica napus HOM05D000811 ORTHO05D004743 7.6e-22 108.2 75 66.7
FvH4_6g24550 Fragaria vesca HOM05D000811 ORTHO05D004743 7.6e-22 108.2 75 68.0
FAN02G2932 Fragaria x ananassa HOM05D000811 ORTHO05D004743 7.6e-22 108.2 75 68.0
FAN14G0683 Fragaria x ananassa HOM05D000811 ORTHO05D004743 7.6e-22 108.2 75 68.0
HPP92_003523 Vanilla planifolia HOM05D000811 ORTHO05D004743 7.6e-22 108.2 75 68.0
BcaB03g16590 Brassica carinata HOM05D000811 ORTHO05D004743 9.9e-22 107.8 75 66.7
Migut.B00125 Erythranthe guttata HOM05D000811 ORTHO05D004743 9.9e-22 107.8 75 69.3
A06p33380 Brassica napus HOM05D000811 ORTHO05D004743 1.3e-21 107.5 75 65.3
Oeu062504.1 Olea europaea HOM05D000811 ORTHO05D004743 1.3e-21 107.5 75 70.7
AT2G18040 Arabidopsis thaliana HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 65.3
BcaC06g36361 Brassica carinata HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 66.7
C07p04900 Brassica napus HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 66.7
BolC7t40891H Brassica oleracea HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 66.7
BraA06t26271Z Brassica rapa HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 65.3
CARHR108530 Cardamine hirsuta HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 65.3
Rhsim05G0067500 Rhododendron simsii HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 65.3
Sp3g31470 Schrenkiella parvula HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 65.3
SMO146G0274 Selaginella moellendorffii HOM05D000811 ORTHO05D004743 1.7e-21 107.1 75 64.0
AL3G51190 Arabidopsis lyrata HOM05D000811 ORTHO05D004743 2.2e-21 106.7 75 65.3
Peaxi162Scf00799g00517 Petunia axillaris HOM05D000811 ORTHO05D004743 2.2e-21 106.7 75 64.0
THA.LOC104807488 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 2.2e-21 106.7 75 65.3
Actinidia31003 Actinidia chinensis HOM05D000811 ORTHO05D004743 2.9e-21 106.3 75 65.3
CDE09G0022 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 2.9e-21 106.3 75 66.7
C03p58940 Brassica napus HOM05D000811 ORTHO05D004743 3.8e-21 105.9 75 65.3
BolC3t18151H Brassica oleracea HOM05D000811 ORTHO05D004743 3.8e-21 105.9 75 65.3
BolC6t36506H Brassica oleracea HOM05D000811 ORTHO05D004743 3.8e-21 105.9 75 65.3
FAN05G0499 Fragaria x ananassa HOM05D000811 ORTHO05D004743 3.8e-21 105.9 75 66.7
arahy.Tifrunner.gnm1.ann1.9YI44J Arachis hypogaea HOM05D007334 ORTHO05D004743 4.9e-21 105.5 72 69.4
Carub.0003s3219 Capsella rubella HOM05D000811 ORTHO05D004743 4.9e-21 105.5 75 65.3
CDE02G4615 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 6.4e-21 105.1 105 52.4
GSVIVG01018801001 Vitis vinifera HOM05D000811 ORTHO05D004743 1.4e-20 104.0 75 65.3
Pp3c20_23120 Physcomitrium patens HOM05D000811 ORTHO05D004743 1.9e-20 103.6 75 64.0
DCAR_016616 Daucus carota HOM05D000811 ORTHO05D004743 2.4e-20 103.2 72 61.1
CAN.G1365.1 Capsicum annuum HOM05D000811 ORTHO05D004743 3.2e-20 102.8 105 48.6
vmacro17410 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 3.2e-20 102.8 73 64.4
Oeu060412.1 Olea europaea HOM05D000811 ORTHO05D004743 4.2e-20 102.4 75 61.3
Solyc02g062250.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 4.2e-20 102.4 75 61.3
PGSC0003DMG400019933 Solanum tuberosum HOM05D000811 ORTHO05D004743 4.2e-20 102.4 75 61.3
HPP92_002102 Vanilla planifolia HOM05D000811 ORTHO05D004743 5.4e-20 102.1 75 65.3
unitig_0.g45 Utricularia gibba HOM05D000628 ORTHO05D001121 9.3e-20 101.3 75 62.7
Sopen02g013220 Solanum pennellii HOM05D000811 ORTHO05D004743 2.1e-19 100.1 75 60.0
AagrBONN_evm.TU.Sc2ySwM_228.1572 Anthoceros agrestis HOM05D000811 ORTHO05D004743 4.6e-19 99.0 105 46.7
Zm00001eb419950 Zea mays HOM05D000811 ORTHO05D004743 4.6e-19 99.0 76 60.5
MSTRG.2701 Avicennia marina HOM05D000811 ORTHO05D004743 6.0e-19 98.6 83 59.0
Pp3c10_25090 Physcomitrium patens HOM05D000811 ORTHO05D004743 6.0e-19 98.6 75 60.0
Os04g0118500 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D004743 7.8e-19 98.2 76 60.5
SEGI_07022 Sequoiadendron giganteum HOM05D000811 ORTHO05D004743 7.8e-19 98.2 72 63.9
Actinidia22989 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.7e-18 97.1 70 61.4
Migut.H01149 Erythranthe guttata HOM05D000811 ORTHO05D004743 6.6e-18 95.1 75 60.0
SalBow3G3608 Salvia bowleyana HOM05D000811 ORTHO05D004743 6.6e-18 95.1 75 58.7
Zm00001eb067280 Zea mays HOM05D000811 ORTHO05D004743 8.7e-18 94.7 75 60.0
PSO210G3301 Papaver somniferum HOM05D000811 ORTHO05D004743 1.1e-17 94.4 76 59.2
arahy.Tifrunner.gnm1.ann1.6S1J49 Arachis hypogaea HOM05D004782 ORTHO05D005498 1.9e-17 93.6 73 60.3
unitig_699.g19711 Utricularia gibba HOM05D000811 ORTHO05D004743 5.6e-17 92.0 75 56.0
MCO04G419 Micromonas commoda HOM05D000811 ORTHO05D004743 1.3e-16 90.9 105 45.7
Nitab4.5_0010885g0050 Nicotiana tabacum HOM05D000811 ORTHO05D004743 3.6e-16 89.4 72 56.9
Ah.02g124500 Amaranthus hybridus HOM05D000811 ORTHO05D004743 5.3e-15 85.5 58 63.8
CBR_g552 Chara braunii HOM05D000811 ORTHO05D004743 2.0e-14 83.6 75 53.3
Atru.chr3.785 Acer truncatum HOM05D000811 ORTHO05D004743 9.9e-14 81.3 63 61.9
arahy.Tifrunner.gnm1.ann1.0S2HJN Arachis hypogaea HOM05D007334 ORTHO05D004743 5.4e-12 75.5 76 50.0
PRCOL_00002510 Prasinoderma coloniale HOM05D009714 ORTHO05D004743 2.1e-11 73.6 100 44.0
Haze_26720 Corylus avellana HOM05D000811 ORTHO05D004743 3.9e-10 69.3 107 39.3
Cre16.g671900 Chlamydomonas reinhardtii HOM05D000811 ORTHO05D004743 8.1e-08 61.6 75 42.7
PSO170G2420 Papaver somniferum HOM05D000811 ORTHO05D004743 1.4e-07 60.8 49 59.2
Actinidia00122 Actinidia chinensis HOM05D000811 ORTHO05D004743 2.0e-06 57.0 44 59.1
Actinidia20649 Actinidia chinensis HOM05D000811 ORTHO05D004743 2.0e-06 57.0 44 59.1


User provided reference genes

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