Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI07_g01997_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 3.6e-60 234.6 108 100.0
MBI07_g02004_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 5.5e-24 114.4 79 63.3
AUR62029426 Chenopodium quinoa HOM05D001817 ORTHO05D001647 2.3e-14 82.4 89 41.6
Phvul.006G043500 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 5.2e-14 81.3 71 52.1
ATR0582G316 Amborella trichopoda HOM05D001817 ORTHO05D001647 1.1e-13 80.1 99 40.4
EL10Ac6g15442 Beta vulgaris HOM05D001817 ORTHO05D001647 2.6e-13 79.0 89 39.3
RcHm_v2.0_Chr6g0297461 Rosa chinensis HOM05D001817 ORTHO05D001647 2.6e-13 79.0 78 46.2
Phvul.007G030500 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 3.3e-13 78.6 73 45.2
Phvul.007G030200 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 4.4e-13 78.2 73 45.2
TAR629G0897 Trochodendron aralioides HOM05D001817 ORTHO05D001647 4.4e-13 78.2 77 48.1
TAR629G2934 Trochodendron aralioides HOM05D001817 ORTHO05D001647 4.4e-13 78.2 77 48.1
CDE05G1510 Ceratophyllum demersum HOM05D000485 ORTHO05D000341 7.4e-13 77.4 77 48.1
Glyma.10G271300 Glycine max HOM05D001817 ORTHO05D001647 1.3e-12 76.6 71 46.5
Sc03g0006290 Simmondsia chinensis HOM05D001817 ORTHO05D001647 1.7e-12 76.3 94 38.3
CDE05G3187 Ceratophyllum demersum HOM05D001817 ORTHO05D001647 2.2e-12 75.9 76 46.1
MBI18_g29804_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 2.2e-12 75.9 72 47.2
VMungo0331G0739 Vigna mungo HOM05D001817 ORTHO05D001647 2.2e-12 75.9 71 47.9
Duzib052G0237 Durio zibethinus HOM05D001817 ORTHO05D001647 3.7e-12 75.1 71 45.1
MBI07_g02003_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 3.7e-12 75.1 77 45.5
Lj3g0023162 Lotus japonicus HOM05D001817 ORTHO05D001647 4.8e-12 74.7 71 46.5
Lalb_Chr07g0186901 Lupinus albus HOM05D001817 ORTHO05D001647 6.3e-12 74.3 82 45.1
Glyma.08G316300 Glycine max HOM05D001817 ORTHO05D001647 8.2e-12 73.9 77 48.1
Prupe.1G484000 Prunus persica HOM05D001817 ORTHO05D001647 8.2e-12 73.9 76 43.4
Ciclev10010457m.g Citrus clementina HOM05D001817 ORTHO05D001647 1.1e-11 73.6 73 43.8
Sed0018471 Sechium edule HOM05D001817 ORTHO05D001647 1.1e-11 73.6 76 44.7
Phvul.010G051700 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.4e-11 73.2 73 42.5
TAR371G0865 Trochodendron aralioides HOM05D001817 ORTHO05D001647 1.4e-11 73.2 77 44.2
HPP92_021690 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.4e-11 73.2 87 43.7
VMungo0720G3158 Vigna mungo HOM05D001817 ORTHO05D001647 1.4e-11 73.2 71 43.7
Lalb_Chr21g0316231 Lupinus albus HOM05D001817 ORTHO05D001647 1.8e-11 72.8 71 46.5
Phvul.001G045800 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.8e-11 72.8 70 47.1
HPP92_021712 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.8e-11 72.8 95 42.1
QL12p013638 Quercus lobata HOM05D001817 ORTHO05D001647 4.1e-11 71.6 85 35.3
TAR622G0534 Trochodendron aralioides HOM05D001817 ORTHO05D001647 4.1e-11 71.6 92 40.2
Haze_21486 Corylus avellana HOM05D001817 ORTHO05D001647 5.3e-11 71.2 84 40.5
CsaV3_3G046190 Cucumis sativus L. HOM05D001817 ORTHO05D001647 7.0e-11 70.9 79 43.0
Glyma.10G113700 Glycine max HOM05D001817 ORTHO05D001647 7.0e-11 70.9 97 36.1
VMungo0540G2413 Vigna mungo HOM05D001817 ORTHO05D001647 7.0e-11 70.9 71 46.5
FAN24G1684 Fragaria x ananassa HOM05D001817 ORTHO05D001647 9.1e-11 70.5 73 43.8
Hund04268 Selenicereus undatus HOM05D008125 ORTHO05D010359 9.1e-11 70.5 94 35.1
VMungo0720G1259 Vigna mungo HOM05D001817 ORTHO05D001647 9.1e-11 70.5 75 46.7
Glyma.10G186200 Glycine max HOM05D001817 ORTHO05D001647 1.6e-10 69.7 75 46.7
QL07p000848 Quercus lobata HOM05D001817 ORTHO05D001647 1.6e-10 69.7 83 34.9
QL07p000880 Quercus lobata HOM05D001817 ORTHO05D001647 1.6e-10 69.7 83 34.9
VMungo0331G0458 Vigna mungo HOM05D001817 ORTHO05D001647 1.6e-10 69.7 71 46.5
Lalb_Chr07g0186891 Lupinus albus HOM05D001817 ORTHO05D001647 2.0e-10 69.3 82 45.1
Lalb_Chr21g0316211 Lupinus albus HOM05D001817 ORTHO05D001647 2.0e-10 69.3 71 43.7
FvH4_5g25410 Fragaria vesca HOM05D001817 ORTHO05D001647 2.6e-10 68.9 72 41.7
FAN18G2855 Fragaria x ananassa HOM05D001817 ORTHO05D001647 2.6e-10 68.9 72 41.7
Glyma.17G218100 Glycine max HOM05D001817 ORTHO05D001647 2.6e-10 68.9 71 45.1
Lj4g0011737 Lotus japonicus HOM05D001817 ORTHO05D001647 2.6e-10 68.9 73 41.1
Lalb_Chr13g0294721 Lupinus albus HOM05D001817 ORTHO05D001647 2.6e-10 68.9 79 40.5
Thecc.02G154600 Theobroma cacao HOM05D001817 ORTHO05D001647 2.6e-10 68.9 76 39.5
arahy.Tifrunner.gnm1.ann1.H9XFHY Arachis hypogaea HOM05D001817 ORTHO05D001647 3.5e-10 68.6 71 43.7
FvH4_2g28690 Fragaria vesca HOM05D001817 ORTHO05D001647 3.5e-10 68.6 73 42.5
FAN15G2483 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.5e-10 68.6 81 37.0
FAN27G0609 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.5e-10 68.6 73 42.5
FAN27G3307 Fragaria x ananassa HOM05D000140 ORTHO05D000087 3.5e-10 68.6 81 38.3
FvH4_2g27480 Fragaria vesca HOM05D001817 ORTHO05D001647 4.5e-10 68.2 81 37.0
FAN20G0384 Fragaria x ananassa HOM05D000140 ORTHO05D000087 4.5e-10 68.2 81 37.0
FAN24G1722 Fragaria x ananassa HOM05D000140 ORTHO05D000087 4.5e-10 68.2 81 37.0
Zm00001eb307030 Zea mays HOM05D001817 ORTHO05D001647 4.5e-10 68.2 77 46.8
CDE02G0050 Ceratophyllum demersum HOM05D001817 ORTHO05D001647 5.9e-10 67.8 94 40.4
Potri.004G167900 Populus trichocarpa HOM05D001817 ORTHO05D001647 5.9e-10 67.8 96 37.5
Sc03g0006280 Simmondsia chinensis HOM05D001817 ORTHO05D001647 5.9e-10 67.8 91 35.2
Zm00001eb170490 Zea mays HOM05D001817 ORTHO05D001647 5.9e-10 67.8 74 45.9
Zm00001eb170500 Zea mays HOM05D001817 ORTHO05D001647 5.9e-10 67.8 74 45.9
COL.COLO4_18892 Corchorus olitorius HOM05D001817 ORTHO05D001647 7.7e-10 67.4 80 40.0
Glyma.08G357100 Glycine max HOM05D001817 ORTHO05D001647 7.7e-10 67.4 71 45.1
TAR622G0422 Trochodendron aralioides HOM05D001817 ORTHO05D001647 7.7e-10 67.4 77 42.9
TAR622G1058 Trochodendron aralioides HOM05D001817 ORTHO05D001647 7.7e-10 67.4 77 42.9
Cpa.g.sc187.6 Carica papaya HOM05D001817 ORTHO05D001647 1.3e-09 66.6 71 39.4
Gohir.D13G060100 Gossypium hirsutum HOM05D001817 ORTHO05D001647 1.3e-09 66.6 78 35.9
Lj5g0009014 Lotus japonicus HOM05D001817 ORTHO05D001647 1.3e-09 66.6 78 39.7
Medtr2g063010 Medicago truncatula HOM05D001817 ORTHO05D001647 1.3e-09 66.6 73 41.1
Sed0003760 Sechium edule HOM05D001817 ORTHO05D001647 1.3e-09 66.6 79 39.2
CDE06G0004 Ceratophyllum demersum HOM05D001817 ORTHO05D001647 1.7e-09 66.2 76 46.1
Lalb_Chr03g0036441 Lupinus albus HOM05D001817 ORTHO05D001647 1.7e-09 66.2 78 35.9
Actinidia22324 Actinidia chinensis HOM05D001817 ORTHO05D001647 2.2e-09 65.9 66 39.4
CsaV3_6G045660 Cucumis sativus L. HOM05D001817 ORTHO05D001647 2.2e-09 65.9 71 40.8
Glyma.09G085400 Glycine max HOM05D001817 ORTHO05D001647 2.2e-09 65.9 71 43.7
Gohir.A13G061900 Gossypium hirsutum HOM05D001817 ORTHO05D001647 2.2e-09 65.9 78 35.9
Lalb_Chr13g0294691 Lupinus albus HOM05D001817 ORTHO05D001647 2.2e-09 65.9 72 43.1
PSO675G1843 Papaver somniferum HOM05D001817 ORTHO05D001647 2.2e-09 65.9 77 41.6
Sed0025130 Sechium edule HOM05D001817 ORTHO05D001647 2.2e-09 65.9 71 42.3
Gorai.013G068000 Gossypium raimondii HOM05D001817 ORTHO05D001647 2.9e-09 65.5 78 35.9
HPP92_021711 Vanilla planifolia HOM05D001817 ORTHO05D001647 2.9e-09 65.5 73 42.5
Atru.chr6.250 Acer truncatum HOM05D001817 ORTHO05D001647 3.8e-09 65.1 76 38.2
Ciclev10009917m.g Citrus clementina HOM05D001817 ORTHO05D001647 3.8e-09 65.1 71 42.3
Sed0012505 Sechium edule HOM05D001817 ORTHO05D001647 3.8e-09 65.1 79 39.2
Lsat_1_v5_gn_6_115781 Lactuca sativa HOM05D001817 ORTHO05D001647 5.0e-09 64.7 76 39.5
Prupe.1G484100 Prunus persica HOM05D001817 ORTHO05D001647 5.0e-09 64.7 79 38.0
Sabra09G0098900 Salix brachista HOM05D001817 ORTHO05D001647 6.5e-09 64.3 96 35.4
Sc23g0006630 Simmondsia chinensis HOM05D001817 ORTHO05D001647 6.5e-09 64.3 72 44.4
Thecc.02G154500 Theobroma cacao HOM05D001817 ORTHO05D001647 6.5e-09 64.3 73 39.7
ClCG05G016690 Citrullus lanatus HOM05D001817 ORTHO05D001647 8.5e-09 63.9 79 40.5
FAN27G2147 Fragaria x ananassa HOM05D001817 ORTHO05D001647 8.5e-09 63.9 76 36.8
Lalb_Chr12g0205721 Lupinus albus HOM05D001817 ORTHO05D001647 8.5e-09 63.9 71 38.0
MD08G1079500 Malus domestica HOM05D001817 ORTHO05D001647 8.5e-09 63.9 76 40.8
Os02g0511600 Oryza sativa ssp. japonica HOM05D001817 ORTHO05D001647 8.5e-09 63.9 89 40.4
CiPaw.08G009300 Carya illinoinensis HOM05D001817 ORTHO05D001647 1.1e-08 63.5 71 39.4
Duzib150G1023 Durio zibethinus HOM05D001817 ORTHO05D001647 1.1e-08 63.5 97 37.1
Lj4g0027202 Lotus japonicus HOM05D001817 ORTHO05D001647 1.5e-08 63.2 71 39.4
Phvul.002G171300 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.5e-08 63.2 74 43.2
BcaC06g34407 Brassica carinata HOM05D001817 ORTHO05D001647 1.9e-08 62.8 72 41.7
A06p46400 Brassica napus HOM05D001817 ORTHO05D001647 1.9e-08 62.8 72 41.7
C07p29020 Brassica napus HOM05D001817 ORTHO05D001647 1.9e-08 62.8 72 41.7
BolC7t43441H Brassica oleracea HOM05D001817 ORTHO05D001647 1.9e-08 62.8 72 41.7
BraA06t27504Z Brassica rapa HOM05D001817 ORTHO05D001647 1.9e-08 62.8 72 41.7
Dinv26451 Davidia involucrata HOM05D001817 ORTHO05D001647 1.9e-08 62.8 77 35.1
HanXRQChr16g0511881 Helianthus annuus HOM05D001817 ORTHO05D001647 1.9e-08 62.8 76 38.2
Lj4g0004287 Lotus japonicus HOM05D001817 ORTHO05D001647 1.9e-08 62.8 74 41.9
Phvul.009G216600 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 1.9e-08 62.8 73 42.5
VMungo0720G0118 Vigna mungo HOM05D001817 ORTHO05D001647 1.9e-08 62.8 76 38.2
CsaV3_3G046170 Cucumis sativus L. HOM05D001817 ORTHO05D001647 2.5e-08 62.4 85 32.9
HanXRQChr13g0400031 Helianthus annuus HOM05D001817 ORTHO05D001647 2.5e-08 62.4 72 41.7
Manes.02G218600 Manihot esculenta HOM05D001817 ORTHO05D001647 2.5e-08 62.4 78 38.5
Sed0010450 Sechium edule HOM05D001817 ORTHO05D001647 2.5e-08 62.4 79 38.0
ECA246G0220 Erigeron canadensis HOM05D001817 ORTHO05D001647 3.2e-08 62.0 76 39.5
Thhalv10026845m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 3.2e-08 62.0 78 35.9
HPP92_021691 Vanilla planifolia HOM05D001817 ORTHO05D001647 3.2e-08 62.0 73 41.1
arahy.Tifrunner.gnm1.ann1.QWA25E Arachis hypogaea HOM05D001817 ORTHO05D001647 4.2e-08 61.6 71 40.8
Medtr2g438190 Medicago truncatula HOM05D001817 ORTHO05D001647 4.2e-08 61.6 71 42.3
Sp2g10630 Schrenkiella parvula HOM05D001817 ORTHO05D001647 4.2e-08 61.6 71 39.4
MELO3C033004.2 Cucumis melo HOM05D001817 ORTHO05D001647 5.5e-08 61.2 71 38.0
Psat6g048880 Pisum sativum HOM05D001817 ORTHO05D001647 5.5e-08 61.2 68 38.2
TPR.G3595 Trifolium pratense HOM05D001817 ORTHO05D001647 5.5e-08 61.2 72 41.7
Lj4g0020170 Lotus japonicus HOM05D001817 ORTHO05D001647 7.2e-08 60.8 71 38.0
PSO541G2996 Papaver somniferum HOM05D001817 ORTHO05D001647 7.2e-08 60.8 77 39.0
Phvul.007G239600 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 7.2e-08 60.8 76 36.8
Potri.009G129400 Populus trichocarpa HOM05D001817 ORTHO05D001647 7.2e-08 60.8 99 33.3
MELO3C003721.2 Cucumis melo HOM05D001817 ORTHO05D001647 9.4e-08 60.5 85 32.9
Glyma.20G204300 Glycine max HOM05D001817 ORTHO05D001647 9.4e-08 60.5 75 38.7
Medtr1g049240 Medicago truncatula HOM05D001817 ORTHO05D001647 1.2e-07 60.1 71 35.2
Psat1g016120 Pisum sativum HOM05D001817 ORTHO05D001647 1.2e-07 60.1 72 40.3
TPR.G9069 Trifolium pratense HOM05D001817 ORTHO05D001647 1.2e-07 60.1 73 37.0
Zm00001eb421200 Zea mays HOM05D001817 ORTHO05D001647 1.2e-07 60.1 69 44.9
Rhsim08G0041600 Rhododendron simsii HOM05D000350 ORTHO05D000228 1.6e-07 59.7 76 36.8
VMungo0464G1322 Vigna mungo HOM05D001817 ORTHO05D001647 1.6e-07 59.7 71 35.2
Atru.chr7.2474 Acer truncatum HOM05D001817 ORTHO05D001647 2.1e-07 59.3 76 39.5
ATR0582G117 Amborella trichopoda HOM05D001817 ORTHO05D001647 2.1e-07 59.3 70 37.1
BcaC06g31519 Brassica carinata HOM05D001817 ORTHO05D001647 2.1e-07 59.3 72 38.9
FvH4_2g28712 Fragaria vesca HOM05D001817 ORTHO05D001647 2.1e-07 59.3 69 40.6
Medtr1g048300 Medicago truncatula HOM05D001817 ORTHO05D001647 2.1e-07 59.3 88 28.4
VMungo0464G0399 Vigna mungo HOM05D001817 ORTHO05D001647 2.1e-07 59.3 71 35.2
Lj4g0014854 Lotus japonicus HOM05D001817 ORTHO05D001647 2.7e-07 58.9 73 37.0
Medtr8g042530 Medicago truncatula HOM05D001817 ORTHO05D001647 2.7e-07 58.9 86 33.7
VMungo0464G1777 Vigna mungo HOM05D001817 ORTHO05D001647 3.6e-07 58.5 71 33.8
Glyma.10G114100 Glycine max HOM05D001817 ORTHO05D001647 4.7e-07 58.2 97 32.0
Lj6g0014356 Lotus japonicus HOM05D001817 ORTHO05D001647 4.7e-07 58.2 74 35.1
Phvul.009G216700 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 4.7e-07 58.2 73 41.1
Atru.chr7.2470 Acer truncatum HOM05D001817 ORTHO05D001647 6.1e-07 57.8 71 38.0
CAN.G111.7 Capsicum annuum HOM05D001817 ORTHO05D001647 6.1e-07 57.8 93 33.3
Thhalv10009797m.g Eutrema salsugineum HOM05D001817 ORTHO05D001647 6.1e-07 57.8 78 35.9
Sopen10g024540 Solanum pennellii HOM05D001817 ORTHO05D001647 6.1e-07 57.8 92 34.8
Psat3g204760 Pisum sativum HOM05D001817 ORTHO05D001647 8.0e-07 57.4 72 41.7
arahy.Tifrunner.gnm1.ann1.E0VXY6 Arachis hypogaea HOM05D001817 ORTHO05D001647 1.0e-06 57.0 73 37.0
Lj6g0012802 Lotus japonicus HOM05D001817 ORTHO05D001647 1.0e-06 57.0 73 35.6
TWI34G0730 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 1.0e-06 57.0 74 41.9
ATR0582G378 Amborella trichopoda HOM05D001817 ORTHO05D001647 1.4e-06 56.6 72 34.7
Lj4g0019656 Lotus japonicus HOM05D001817 ORTHO05D001647 1.4e-06 56.6 75 33.3
Psat0s3990g0120 Pisum sativum HOM05D001817 ORTHO05D001647 1.4e-06 56.6 86 32.6
Glyma.07G189600 Glycine max HOM05D001817 ORTHO05D001647 2.3e-06 55.8 78 38.5
PGSC0003DMG400004421 Solanum tuberosum HOM05D001817 ORTHO05D001647 2.3e-06 55.8 80 37.5
Rhsim04G0092100 Rhododendron simsii HOM05D001817 ORTHO05D001647 3.0e-06 55.5 81 37.0
Atru.chr12.564 Acer truncatum HOM05D001817 ORTHO05D001647 4.0e-06 55.1 76 35.5
AL7G19750 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 4.0e-06 55.1 70 37.1
AL7G19780 Arabidopsis lyrata HOM05D001817 ORTHO05D001647 4.0e-06 55.1 70 37.1
arahy.Tifrunner.gnm1.ann1.8VW32B Arachis hypogaea HOM05D001817 ORTHO05D001647 4.0e-06 55.1 71 36.6
Lsat_1_v5_gn_6_115761 Lactuca sativa HOM05D001817 ORTHO05D001647 4.0e-06 55.1 74 35.1
Manes.16G124600 Manihot esculenta HOM05D001817 ORTHO05D001647 4.0e-06 55.1 77 32.5
Medtr6g445140 Medicago truncatula HOM05D001817 ORTHO05D001647 4.0e-06 55.1 73 34.2
Sed0003642 Sechium edule HOM05D001817 ORTHO05D001647 4.0e-06 55.1 83 31.3
Solyc10g054673.1 Solanum lycopersicum HOM05D001817 ORTHO05D001647 4.0e-06 55.1 95 33.7
Solyc10g054677.1 Solanum lycopersicum HOM05D001817 ORTHO05D001647 4.0e-06 55.1 95 33.7
arahy.Tifrunner.gnm1.ann1.J1V55D Arachis hypogaea HOM05D001817 ORTHO05D001647 5.2e-06 54.7 73 37.0
arahy.Tifrunner.gnm1.ann1.SUQM4P Arachis hypogaea HOM05D001817 ORTHO05D001647 5.2e-06 54.7 73 37.0
PSO478G3089 Papaver somniferum HOM05D001817 ORTHO05D001647 5.2e-06 54.7 69 40.6
Medtr0100s0140 Medicago truncatula HOM05D001817 ORTHO05D001647 6.7e-06 54.3 86 31.4
PSO675G1869 Papaver somniferum HOM05D001817 ORTHO05D001647 8.8e-06 53.9 85 36.5
SGA_v2.0_scaffold116G32303 Striga asiatica HOM05D001817 ORTHO05D001647 8.8e-06 53.9 84 33.3


User provided reference genes

Program Settings