Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 8.9e-90 333.6 166 100.0
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.4e-42 176.0 132 72.0
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 9.0e-34 147.5 133 57.9
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 2.0e-33 146.4 133 57.9
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 4.5e-33 145.2 132 58.3
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.0e-32 144.1 134 56.7
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.3e-32 143.7 130 57.7
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 2.2e-32 142.9 130 56.9
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 4.9e-32 141.7 134 56.0
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 4.9e-32 141.7 134 56.0
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 4.9e-32 141.7 134 56.0
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 6.5e-32 141.4 137 56.2
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 6.5e-32 141.4 133 55.6
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 6.5e-32 141.4 134 55.2
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 8.4e-32 141.0 132 55.3
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 8.4e-32 141.0 133 57.1
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 8.4e-32 141.0 133 57.1
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 8.4e-32 141.0 131 57.3
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 1.4e-31 140.2 132 54.5
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.4e-31 140.2 132 54.5
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.4e-31 140.2 139 55.4
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 2.5e-31 139.4 130 56.2
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 2.5e-31 139.4 130 56.2
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.5e-31 139.4 137 54.7
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 2.5e-31 139.4 131 56.5
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 2.5e-31 139.4 131 54.2
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 9.3e-31 137.5 137 55.5
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 9.3e-31 137.5 131 55.0
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 1.2e-30 137.1 138 53.6
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.6e-30 136.7 136 54.4
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.6e-30 136.7 134 55.2
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.1e-30 136.3 137 55.5
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 2.7e-30 136.0 136 54.4
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 2.7e-30 136.0 132 54.5
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 2.7e-30 136.0 133 55.6
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 3.5e-30 135.6 130 55.4
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 4.6e-30 135.2 134 53.7
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 4.6e-30 135.2 130 56.2
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 6.0e-30 134.8 130 54.6
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.0e-29 134.0 127 55.9
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.0e-29 134.0 135 55.6
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.0e-29 134.0 135 55.6
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 2.3e-29 132.9 134 50.7
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 2.3e-29 132.9 130 55.4
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 2.3e-29 132.9 137 54.7
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.3e-29 132.9 134 53.0
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 5.1e-29 131.7 133 53.4
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 6.7e-29 131.3 131 51.1
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 6.7e-29 131.3 131 51.1
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 6.7e-29 131.3 134 50.7
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 6.7e-29 131.3 134 50.7
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.1e-28 130.6 138 52.2
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 1.9e-28 129.8 134 53.7
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 1.9e-28 129.8 133 51.1
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 1.9e-28 129.8 130 50.8
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 1.9e-28 129.8 131 50.4
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 2.5e-28 129.4 134 50.7
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 3.3e-28 129.0 133 51.1
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 3.3e-28 129.0 133 54.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 3.3e-28 129.0 134 50.7
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 4.3e-28 128.6 131 52.7
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.3e-28 128.6 131 49.6
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 5.7e-28 128.3 132 51.5
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 7.4e-28 127.9 133 50.4
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 9.6e-28 127.5 133 51.1
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 9.6e-28 127.5 133 50.4
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.6e-27 126.7 132 50.8
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 1.6e-27 126.7 133 49.6
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 3.7e-27 125.6 127 53.5
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 4.8e-27 125.2 130 53.1
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 6.2e-27 124.8 127 52.8
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 6.2e-27 124.8 132 50.0
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.2e-27 124.4 127 53.5
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.2e-27 124.4 127 53.5
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.1e-26 124.0 131 51.9
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.1e-26 124.0 124 54.0
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.1e-26 124.0 130 51.5
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.4e-26 123.6 131 51.9
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 6.9e-26 121.3 130 51.5
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 9.0e-26 120.9 133 52.6
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 2.0e-25 119.8 146 46.6
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 4.5e-25 118.6 134 49.3
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.0e-24 117.5 134 49.3
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.3e-24 117.1 77 68.8
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 8.4e-24 114.4 137 48.9
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 7.1e-23 111.3 123 50.4
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 1.6e-22 110.2 116 49.1
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.1e-22 109.8 130 49.2
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 7.9e-22 107.8 132 45.5
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 6.7e-21 104.8 129 45.0
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 3.3e-20 102.4 128 43.0
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 7.4e-20 101.3 132 42.4
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 2.0e-17 93.2 131 45.0
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.2e-16 89.7 118 41.5
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 1.1e-15 87.4 97 50.5
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 1.4e-15 87.0 97 50.5
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 7.4e-12 74.7 130 35.4
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.4e-10 70.5 99 42.4
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 4.5e-09 65.5 87 43.7
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.5e-07 58.5 37 75.7
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.5e-07 58.5 37 75.7
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.5e-07 58.5 37 75.7


User provided reference genes

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