Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 0.0e+00 1835.8 1056 100.0
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 1.3e-239 833.9 1063 52.6
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 1.5e-238 830.5 1047 53.3
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 4.3e-230 802.4 1061 50.8
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 9.3e-217 758.1 843 57.2
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 4.2e-209 732.6 1061 47.0
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 3.5e-208 729.6 1040 49.6
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 2.3e-207 726.9 1009 50.3
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 5.1e-207 725.7 1066 46.7
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 1.8e-204 717.2 1047 46.8
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 2.6e-203 713.4 1019 49.9
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 1.3e-202 711.1 899 52.1
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 1.4e-201 707.6 1054 45.7
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 9.3e-201 704.9 1069 46.6
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 7.9e-200 701.8 1053 46.4
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 3.3e-198 696.4 1048 45.9
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 9.0e-196 688.3 1073 45.3
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 2.0e-195 687.2 1076 46.1
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 4.5e-195 686.0 769 54.4
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 1.4e-193 681.0 1050 45.8
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 2.1e-192 677.2 1018 45.4
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.8e-191 674.1 1078 45.6
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 3.0e-191 673.3 1010 48.7
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 3.9e-191 672.9 1010 47.4
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 3.7e-189 666.4 1131 42.6
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 7.6e-187 658.7 1053 45.9
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 1.0e-186 658.3 1070 43.6
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 8.5e-186 655.2 1079 43.7
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 6.1e-184 649.0 1092 45.1
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 3.9e-183 646.4 1116 45.7
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 5.1e-183 646.0 1038 44.8
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 1.1e-182 644.8 1032 44.7
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 7.4e-182 642.1 1074 44.7
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 1.6e-181 641.0 1069 46.7
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.2e-181 640.6 1049 44.1
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.2e-181 640.6 1071 44.2
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 3.1e-180 636.7 1037 44.8
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 2.6e-179 633.6 1080 46.1
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 7.7e-179 632.1 1085 42.8
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 2.9e-178 630.2 1066 44.4
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 4.2e-177 626.3 865 50.2
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 7.9e-176 622.1 1090 43.8
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 5.1e-175 619.4 1087 42.0
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 8.8e-175 618.6 1072 42.7
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 5.3e-172 609.4 1086 42.3
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 9.1e-172 608.6 1031 44.5
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 3.8e-170 603.2 1057 43.0
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 3.8e-170 603.2 757 50.6
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 1.9e-169 600.9 1078 41.7
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 3.2e-169 600.1 873 45.8
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 5.5e-169 599.4 1095 42.0
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 7.2e-169 599.0 1083 40.6
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 1.5e-166 591.3 801 50.2
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 9.7e-166 588.6 1064 41.4
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 3.7e-165 586.6 996 43.2
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 1.8e-164 584.3 1091 42.5
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 2.4e-164 583.9 769 50.3
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 1.3e-162 578.2 1090 41.7
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 6.1e-160 569.3 1042 41.6
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 8.0e-160 568.9 1046 41.2
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 3.3e-158 563.5 1097 41.0
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 3.1e-156 557.0 1088 42.0
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 2.0e-155 554.3 1076 42.6
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.0e-154 552.0 1066 41.7
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 1.7e-154 551.2 1136 40.6
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 5.0e-154 549.7 1091 40.3
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 9.4e-153 545.4 1112 39.1
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 4.0e-151 540.0 1099 41.8
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 1.3e-149 535.0 1047 40.9
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 1.2e-147 528.5 1043 39.7
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 5.9e-147 526.2 967 42.6
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 1.2e-144 518.5 785 45.4
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 9.8e-142 508.8 933 42.7
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 1.3e-141 508.4 919 42.4
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 3.7e-141 506.9 972 39.4
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 7.0e-140 502.7 940 41.7
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 7.8e-139 499.2 763 44.7
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 3.6e-136 490.3 751 45.9
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 1.5e-134 485.0 1019 40.4
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 2.0e-134 484.6 1052 39.1
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 4.1e-132 476.9 804 44.2
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 3.5e-131 473.8 807 43.6
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 3.5e-131 473.8 807 43.6
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 5.9e-131 473.0 1061 39.0
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 2.3e-130 471.1 917 43.1
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 3.0e-130 470.7 904 41.6
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 5.0e-130 469.9 767 45.6
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 8.6e-130 469.2 806 43.5
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.5e-129 468.4 627 50.1
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 9.5e-129 465.7 1063 39.0
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 9.5e-129 465.7 714 47.2
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 4.7e-128 463.4 1091 37.3
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 2.2e-125 454.5 1254 33.9
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 1.4e-124 451.8 936 40.0
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 1.4e-124 451.8 936 40.0
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 4.6e-123 446.8 865 38.3
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 5.0e-122 443.4 1059 37.7
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 2.4e-111 407.9 806 39.1
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 3.1e-111 407.5 1043 34.6
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 8.9e-111 406.0 834 41.0
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 2.2e-109 401.4 1033 38.0
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 4.6e-107 393.7 1078 35.8
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 3.6e-104 384.0 676 43.5
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.1e-100 372.5 644 40.2
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 1.4e-92 345.5 736 37.9
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 5.4e-92 343.6 747 37.2
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 9.7e-73 279.6 880 30.8
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 1.3e-69 269.2 794 34.0
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 6.5e-69 266.9 759 32.4
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 4.1e-63 247.7 692 33.4
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 4.4e-57 227.6 734 31.2
MBI02_g24140_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.7e-56 225.7 122 97.5
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 4.8e-56 224.2 471 43.3
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 5.9e-54 217.2 297 38.7
Os06g0562700 Oryza sativa ssp. japonica HOM05D004594 ORTHO05D005225 1.7e-48 199.1 478 42.7
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 1.1e-39 169.9 233 49.8
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 1.3e-32 146.4 365 35.6
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 1.9e-28 132.5 196 44.9
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 4.2e-28 131.3 108 66.7
MBI07_g23220_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 9.5e-28 130.2 104 69.2
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 1.4e-23 116.3 93 60.2
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 6.6e-21 107.5 50 100.0
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 5.8e-17 94.4 136 41.9
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 3.7e-16 91.7 71 56.3
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 1.2e-14 86.7 331 25.7
MBI15_g25469_MAGBIO Magnolia biondii HOM05D000031 ORTHO05D000030 1.0e-13 83.6 63 61.9
MBI05_g45846_MAGBIO Magnolia biondii HOM05D000390 ORTHO05D005225 2.3e-13 82.4 43 88.4
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 6.2e-11 74.3 55 58.2
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 2.2e-08 65.9 51 60.8
BcaB05g23630 Brassica carinata HOM05D004594 ORTHO05D005225 3.2e-07 62.0 158 31.6
Oeu052406.1 Olea europaea HOM05D004594 ORTHO05D005225 4.1e-07 61.6 100 46.0
MBI07_g25510_MAGBIO Magnolia biondii HOM05D060153 ORTHO05D005225 1.6e-06 59.7 31 83.9
BraA02t08348Z Brassica rapa HOM05D004594 ORTHO05D005225 2.7e-06 58.9 42 57.1
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 3.5e-06 58.5 207 30.4
MBI14_g30689_MAGBIO Magnolia biondii HOM05D060153 ORTHO05D009942 3.5e-06 58.5 37 78.4
Nn3g17298 Nelumbo nucifera HOM05D004594 ORTHO05D005225 4.6e-06 58.2 66 43.9


User provided reference genes

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