Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g27427_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 8.3e-32 139.8 73 100.0
MBI18_g42710_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 8.8e-26 119.8 71 91.5
MBI18_g45368_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 9.1e-23 109.8 71 84.5
MBI17_g41096_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 4.5e-22 107.5 73 80.8
MBI18_g44363_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.0e-21 106.3 71 83.1
MBI01_g12685_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D007357 1.2e-19 99.4 63 85.7
TAR629G3222 Trochodendron aralioides HOM05D005648 ORTHO05D007357 2.3e-18 95.1 69 73.9
Cfa019074 Carpinus fangiana HOM05D005648 ORTHO05D007357 2.0e-17 92.0 72 65.3
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 4.4e-17 90.9 71 67.6
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 2.8e-16 88.2 71 63.4
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 4.9e-16 87.4 71 63.4
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 4.9e-16 87.4 71 64.8
Aqoxy7G00304 Aquilegia oxysepala HOM05D005648 ORTHO05D007357 6.3e-16 87.0 74 62.2
Gohir.A08G131300 Gossypium hirsutum HOM05D005648 ORTHO05D007357 1.1e-15 86.3 69 63.8
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.8e-15 85.5 71 62.0
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.8e-15 85.5 71 62.0
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 3.2e-15 84.7 72 61.1
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 4.1e-15 84.3 70 60.0
AUR62004360 Chenopodium quinoa HOM05D005648 ORTHO05D007357 5.4e-15 84.0 71 56.3
AUR62022570 Chenopodium quinoa HOM05D005648 ORTHO05D007357 5.4e-15 84.0 71 56.3
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 5.4e-15 84.0 71 60.6
Gorai.004G158700 Gossypium raimondii HOM05D005648 ORTHO05D007357 9.2e-15 83.2 69 59.4
HPP92_008491 Vanilla planifolia HOM05D005648 ORTHO05D007357 9.2e-15 83.2 69 60.9
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 1.2e-14 82.8 71 60.6
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.2e-14 82.8 71 60.6
Gohir.D08G152800 Gossypium hirsutum HOM05D005648 ORTHO05D007357 1.6e-14 82.4 69 59.4
FAN03G1082 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.0e-14 82.0 71 60.6
EL10Ac7g16797 Beta vulgaris HOM05D005648 ORTHO05D007357 3.5e-14 81.3 71 54.9
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 3.5e-14 81.3 69 56.5
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 4.6e-14 80.9 69 59.4
Duzib133G1405 Durio zibethinus HOM05D005648 ORTHO05D007357 4.6e-14 80.9 71 63.4
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 5.9e-14 80.5 71 57.7
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 5.9e-14 80.5 69 58.0
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 5.9e-14 80.5 69 59.4
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 1.0e-13 79.7 69 56.5
Potri.014G084800 Populus trichocarpa HOM05D005648 ORTHO05D007357 1.3e-13 79.3 70 54.3
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 1.3e-13 79.3 71 59.2
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 1.3e-13 79.3 72 58.3
Actinidia33418 Actinidia chinensis HOM05D005648 ORTHO05D007357 1.7e-13 79.0 71 53.5
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 2.3e-13 78.6 69 59.4
Manes.05G034000 Manihot esculenta HOM05D005648 ORTHO05D007357 2.9e-13 78.2 71 54.9
Ciclev10024354m.g Citrus clementina HOM05D005648 ORTHO05D007357 3.9e-13 77.8 67 59.7
Atru.chr5.500 Acer truncatum HOM05D005648 ORTHO05D007357 5.0e-13 77.4 71 54.9
Actinidia12702 Actinidia chinensis HOM05D005648 ORTHO05D007357 8.6e-13 76.6 71 53.5
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 1.1e-12 76.3 69 58.0
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 1.1e-12 76.3 70 54.3
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 1.9e-12 75.5 71 59.2
AL1G10680 Arabidopsis lyrata HOM05D005648 ORTHO05D007357 3.3e-12 74.7 72 54.2
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 4.3e-12 74.3 71 53.5
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 5.6e-12 73.9 72 52.8
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 5.6e-12 73.9 67 56.7
Cpa.g.sc11.6 Carica papaya HOM05D005648 ORTHO05D007357 7.3e-12 73.6 72 54.2
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 9.5e-12 73.2 71 54.9
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 1.6e-11 72.4 71 52.1
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 1.6e-11 72.4 71 52.1
Carub.0001s0053 Capsella rubella HOM05D005648 ORTHO05D007357 2.1e-11 72.0 72 50.0
AT1G01690 Arabidopsis thaliana HOM05D005648 ORTHO05D007357 2.8e-11 71.6 72 52.8
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 3.6e-11 71.2 72 48.6
QL08p048682 Quercus lobata HOM05D005648 ORTHO05D007357 3.6e-11 71.2 71 56.3
DCAR_006931 Daucus carota HOM05D005648 ORTHO05D007357 1.4e-10 69.3 69 55.1
SGA_v2.0_scaffold4G02313 Striga asiatica HOM05D005648 ORTHO05D007357 1.4e-10 69.3 70 52.9
MBI19_g11759_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D002414 2.3e-10 68.6 44 84.1
Nn1g01539 Nelumbo nucifera HOM05D005648 ORTHO05D007357 2.3e-10 68.6 71 53.5
ATR0680G381 Amborella trichopoda HOM05D005648 ORTHO05D007357 3.1e-10 68.2 70 54.3
Nitab4.5_0000583g0110 Nicotiana tabacum HOM05D005648 ORTHO05D007357 4.0e-10 67.8 71 47.9
Nitab4.5_0006762g0020 Nicotiana tabacum HOM05D005648 ORTHO05D007357 4.0e-10 67.8 71 47.9
ECA234G0615 Erigeron canadensis HOM05D005648 ORTHO05D007357 5.2e-10 67.4 71 47.9
Eucgr.D02293 Eucalyptus grandis HOM05D005648 ORTHO05D007357 6.8e-10 67.0 71 52.1
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 6.8e-10 67.0 69 49.3
CDE04G3514 Ceratophyllum demersum HOM05D005648 ORTHO05D007357 8.9e-10 66.6 70 54.3
ClCG05G001510 Citrullus lanatus HOM05D005648 ORTHO05D007357 8.9e-10 66.6 71 43.7
Phvul.010G099300 Phaseolus vulgaris HOM05D005648 ORTHO05D007357 1.2e-09 66.2 68 54.4
Aa31LG1G11030 Aethionema arabicum HOM05D005648 ORTHO05D007357 1.5e-09 65.9 72 48.6
CARHR000670 Cardamine hirsuta HOM05D005648 ORTHO05D007357 2.0e-09 65.5 69 52.2
Ca_23631_v3 Cicer arietinum L. HOM05D005648 ORTHO05D007357 4.4e-09 64.3 68 52.9
Thhalv10007771m.g Eutrema salsugineum HOM05D005648 ORTHO05D007357 4.4e-09 64.3 72 44.4
Sp1g00620 Schrenkiella parvula HOM05D005648 ORTHO05D007357 5.8e-09 63.9 72 45.8
BcaC06g34230 Brassica carinata HOM05D005648 ORTHO05D007357 7.5e-09 63.5 66 51.5
A06p44840 Brassica napus HOM05D005648 ORTHO05D007357 7.5e-09 63.5 66 51.5
BolC7t43677H Brassica oleracea HOM05D005648 ORTHO05D007357 7.5e-09 63.5 66 51.5
BraA06t27356Z Brassica rapa HOM05D005648 ORTHO05D007357 7.5e-09 63.5 66 51.5
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 7.5e-09 63.5 69 46.4
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 7.5e-09 63.5 68 54.4
PSO478G0111 Papaver somniferum HOM05D005648 ORTHO05D007357 7.5e-09 63.5 68 51.5
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 7.5e-09 63.5 86 41.9
VMungo0331G0956 Vigna mungo HOM05D005648 ORTHO05D007357 7.5e-09 63.5 70 51.4
Ah.05g180590 Amaranthus hybridus HOM05D005648 ORTHO05D007357 9.8e-09 63.2 73 47.9
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 9.8e-09 63.2 68 52.9
Psat4g155800 Pisum sativum HOM05D005648 ORTHO05D007357 9.8e-09 63.2 68 52.9
Lsat_1_v5_gn_4_36080 Lactuca sativa HOM05D005648 ORTHO05D007357 1.3e-08 62.8 71 47.9
PGSC0003DMG400000173 Solanum tuberosum HOM05D005648 ORTHO05D007357 1.3e-08 62.8 71 45.1
THA.LOC104825838 Tarenaya hassleriana HOM05D005648 ORTHO05D007357 1.3e-08 62.8 71 46.5
Lj3g0021061 Lotus japonicus HOM05D005648 ORTHO05D007357 2.9e-08 61.6 68 51.5
Medtr8g030730 Medicago truncatula HOM05D005648 ORTHO05D007357 2.9e-08 61.6 68 52.9
C07p31360 Brassica napus HOM05D005648 ORTHO05D008650 3.7e-08 61.2 66 50.0
TPR.G10304 Trifolium pratense HOM05D005648 ORTHO05D007357 3.7e-08 61.2 68 51.5
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 6.4e-08 60.5 69 42.0
Solyc01g094650.4 Solanum lycopersicum HOM05D005648 ORTHO05D007357 1.1e-07 59.7 71 43.7
Sopen01g038460 Solanum pennellii HOM05D005648 ORTHO05D007357 1.1e-07 59.7 71 43.7
arahy.Tifrunner.gnm1.ann1.B5LD0B Arachis hypogaea HOM05D005648 ORTHO05D007357 3.2e-07 58.2 66 53.0
arahy.Tifrunner.gnm1.ann1.SJPY5G Arachis hypogaea HOM05D005648 ORTHO05D007357 3.2e-07 58.2 66 53.0
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 5.4e-07 57.4 70 48.6
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 5.4e-07 57.4 69 37.7
HanXRQChr16g0522761 Helianthus annuus HOM05D005648 ORTHO05D007357 9.2e-07 56.6 71 42.3
Lalb_Chr17g0339581 Lupinus albus HOM05D005648 ORTHO05D007357 1.2e-06 56.2 68 50.0
MELO3C006108.2 Cucumis melo HOM05D005648 ORTHO05D007357 1.6e-06 55.8 69 37.7
Lalb_Chr10g0096911 Lupinus albus HOM05D005648 ORTHO05D007357 1.6e-06 55.8 68 48.5
MBI06_g29680_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.6e-06 55.8 26 100.0
Zm00001eb000540 Zea mays HOM05D005648 ORTHO05D007357 2.7e-06 55.1 70 38.6
unitig_26.g9738 Utricularia gibba HOM05D005648 ORTHO05D007357 3.5e-06 54.7 44 59.1
BraA10t42311Z Brassica rapa HOM05D005648 ORTHO05D007357 7.8e-06 53.5 72 45.8


User provided reference genes

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