Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g41554_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 4.0e-107 391.3 184 100.0
MBI05_g05143_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 1.9e-61 239.6 129 90.7
Prupe.1G355000 Prunus persica HOM05D005066 ORTHO05D006138 3.9e-46 188.7 129 68.2
CiPaw.07G139500 Carya illinoinensis HOM05D005066 ORTHO05D006138 6.7e-46 188.0 129 70.5
Dinv31933 Davidia involucrata HOM05D005066 ORTHO05D006138 1.9e-45 186.4 129 70.5
vmacro21822 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 2.5e-45 186.0 130 68.5
Aqoxy5G01046 Aquilegia oxysepala HOM05D005066 ORTHO05D006138 4.3e-45 185.3 128 68.8
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla HOM05D005066 ORTHO05D006138 1.3e-44 183.7 129 68.2
GSVIVG01008680001 Vitis vinifera HOM05D005066 ORTHO05D006138 2.1e-44 183.0 129 68.2
Cfa014063 Carpinus fangiana HOM05D005066 ORTHO05D006138 2.8e-44 182.6 129 69.0
MD15G1002700 Malus domestica HOM05D005066 ORTHO05D006138 2.8e-44 182.6 129 66.7
Actinidia37971 Actinidia chinensis HOM05D005066 ORTHO05D006138 4.8e-44 181.8 129 70.5
FAN20G0881 Fragaria x ananassa HOM05D005066 ORTHO05D006138 1.8e-43 179.9 129 65.9
FAN27G0843 Fragaria x ananassa HOM05D005066 ORTHO05D006138 1.8e-43 179.9 129 65.9
AL1G33470 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 3.1e-43 179.1 129 66.7
AT1G20540 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 3.1e-43 179.1 129 65.9
Nn6g31745 Nelumbo nucifera HOM05D005066 ORTHO05D006138 3.1e-43 179.1 129 68.2
Thhalv10008062m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 5.3e-43 178.3 129 66.7
Manes.18G005800 Manihot esculenta HOM05D005066 ORTHO05D006138 5.3e-43 178.3 127 68.5
PSO210G7270 Papaver somniferum HOM05D005066 ORTHO05D006138 5.3e-43 178.3 129 66.7
Cpa.g.sc26.207 Carica papaya HOM05D005066 ORTHO05D006138 6.9e-43 177.9 129 67.4
PSO170G0128 Papaver somniferum HOM05D005066 ORTHO05D006138 6.9e-43 177.9 129 65.9
FvH4_2g37550 Fragaria vesca HOM05D005066 ORTHO05D006138 9.0e-43 177.6 129 65.1
FAN15G0307 Fragaria x ananassa HOM05D005066 ORTHO05D006138 9.0e-43 177.6 129 65.1
RcHm_v2.0_Chr6g0304181 Rosa chinensis HOM05D005066 ORTHO05D006138 1.2e-42 177.2 129 64.3
Carub.0001s2001 Capsella rubella HOM05D005066 ORTHO05D006138 2.0e-42 176.4 129 65.1
ATR0661G259 Amborella trichopoda HOM05D005066 ORTHO05D006138 2.6e-42 176.0 129 63.6
Rhsim06G0007900 Rhododendron simsii HOM05D005066 ORTHO05D006138 1.0e-41 174.1 154 58.4
COL.COLO4_03999 Corchorus olitorius HOM05D005066 ORTHO05D006138 1.3e-41 173.7 142 59.2
DCAR_013911 Daucus carota HOM05D005066 ORTHO05D006138 1.3e-41 173.7 129 65.9
Potri.005G249800 Populus trichocarpa HOM05D005066 ORTHO05D006138 2.2e-41 172.9 129 64.3
CSS0029951 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 2.9e-41 172.6 129 66.7
CANSAT25G3513 Cannabis sativa HOM05D005066 ORTHO05D006138 3.8e-41 172.2 131 64.9
CSS0013002 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 4.9e-41 171.8 128 64.8
Aa31LG7G4800 Aethionema arabicum HOM05D005066 ORTHO05D006138 8.4e-41 171.0 129 64.3
Ciclev10001617m.g Citrus clementina HOM05D005066 ORTHO05D006138 8.4e-41 171.0 128 65.6
Oeu011330.2 Olea europaea HOM05D005066 ORTHO05D006138 1.9e-40 169.9 128 64.1
Os08g0554000 Oryza sativa ssp. japonica HOM05D005066 ORTHO05D006138 2.5e-40 169.5 129 62.8
A06p16540 Brassica napus HOM05D005066 ORTHO05D006138 4.2e-40 168.7 129 62.8
BraA06t24760Z Brassica rapa HOM05D005066 ORTHO05D006138 4.2e-40 168.7 129 62.8
Duzib093G2109 Durio zibethinus HOM05D005066 ORTHO05D006138 4.2e-40 168.7 129 62.8
Sp1g18250 Schrenkiella parvula HOM05D005066 ORTHO05D006138 4.2e-40 168.7 129 62.8
Thecc.08G057800 Theobroma cacao HOM05D005066 ORTHO05D006138 4.2e-40 168.7 129 62.0
Sp5g31400 Schrenkiella parvula HOM05D005066 ORTHO05D006138 5.5e-40 168.3 129 62.8
BcaC08g47273 Brassica carinata HOM05D005066 ORTHO05D006138 7.1e-40 167.9 129 62.0
BolC6t40062H Brassica oleracea HOM05D005066 ORTHO05D006138 7.1e-40 167.9 129 62.0
Carub.0002s2315 Capsella rubella HOM05D005066 ORTHO05D006138 9.3e-40 167.5 128 64.1
Potri.002G011200 Populus trichocarpa HOM05D005066 ORTHO05D006138 9.3e-40 167.5 130 62.3
AL2G36340 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 1.2e-39 167.2 129 62.0
TWI36G1160 Tripterygium wilfordii HOM05D005066 ORTHO05D006138 1.6e-39 166.8 128 62.5
Eucgr.F03549 Eucalyptus grandis HOM05D005066 ORTHO05D006138 2.1e-39 166.4 129 58.9
Lj4C805G13 Lonicera japonica HOM05D005066 ORTHO05D006138 2.7e-39 166.0 134 59.7
THA.LOC104813757 Tarenaya hassleriana HOM05D005066 ORTHO05D006138 2.7e-39 166.0 129 61.2
Nitab4.5_0000588g0150 Nicotiana tabacum HOM05D005066 ORTHO05D006138 3.5e-39 165.6 129 63.6
CARHR021010 Cardamine hirsuta HOM05D005066 ORTHO05D006138 4.6e-39 165.2 129 62.0
Thhalv10018792m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 7.9e-39 164.5 129 61.2
PGR031G0259 Punica granatum HOM05D005066 ORTHO05D006138 1.3e-38 163.7 128 60.9
Zm00001eb180420 Zea mays HOM05D005066 ORTHO05D006138 1.3e-38 163.7 128 58.6
BcaB07g32052 Brassica carinata HOM05D005066 ORTHO05D006138 3.0e-38 162.5 129 59.7
Gorai.009G267800 Gossypium raimondii HOM05D005066 ORTHO05D006138 3.0e-38 162.5 129 62.8
Peaxi162Scf00893g00433 Petunia axillaris HOM05D005066 ORTHO05D006138 3.0e-38 162.5 129 62.8
Gohir.A05G254700 Gossypium hirsutum HOM05D005066 ORTHO05D006138 3.9e-38 162.2 129 62.8
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 5.1e-38 161.8 129 62.8
Cc10_g00720 Coffea canephora HOM05D005066 ORTHO05D006138 6.7e-38 161.4 128 63.3
MSTRG.27774 Avicennia marina HOM05D005066 ORTHO05D006138 1.1e-37 160.6 129 58.9
Lalb_Chr23g0265821 Lupinus albus HOM05D005066 ORTHO05D006138 1.1e-37 160.6 129 62.0
MD08G1003000 Malus domestica HOM05D005066 ORTHO05D006138 2.5e-37 159.5 129 58.1
VMungo1309G2329 Vigna mungo HOM05D005066 ORTHO05D006138 2.5e-37 159.5 129 60.5
Aa31LG4G6350 Aethionema arabicum HOM05D005066 ORTHO05D006138 5.7e-37 158.3 129 60.5
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea HOM05D005066 ORTHO05D006138 5.7e-37 158.3 128 59.4
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea HOM05D005066 ORTHO05D006138 5.7e-37 158.3 128 59.4
Glyma.04G018500 Glycine max HOM05D005066 ORTHO05D006138 2.1e-36 156.4 129 58.9
Migut.C00955 Erythranthe guttata HOM05D005066 ORTHO05D006138 2.8e-36 156.0 129 59.7
Glyma.06G018800 Glycine max HOM05D005066 ORTHO05D006138 1.4e-35 153.7 129 58.1
Phvul.009G010100 Phaseolus vulgaris HOM05D005066 ORTHO05D006138 1.4e-35 153.7 129 58.1
Zm00001eb039840 Zea mays HOM05D005066 ORTHO05D006138 1.4e-35 153.7 128 56.2
Ca_15439_v3 Cicer arietinum L. HOM05D005066 ORTHO05D006138 1.8e-35 153.3 129 56.6
Lj1g0027661 Lotus japonicus HOM05D005066 ORTHO05D006138 2.4e-35 152.9 129 57.4
CANSAT54G1628 Cannabis sativa HOM05D005066 ORTHO05D006138 3.1e-35 152.5 131 59.5
TPR.G38213 Trifolium pratense HOM05D005066 ORTHO05D006138 3.1e-35 152.5 129 58.1
CsaV3_6G031630 Cucumis sativus L. HOM05D005066 ORTHO05D006138 1.5e-34 150.2 130 60.0
SGA_v2.0_scaffold108G30855 Striga asiatica HOM05D005066 ORTHO05D006138 1.5e-34 150.2 129 55.8
Medtr3g115200 Medicago truncatula HOM05D005066 ORTHO05D006138 2.6e-34 149.4 129 57.4
HPP92_008373 Vanilla planifolia HOM05D005066 ORTHO05D006138 1.3e-33 147.1 129 54.3
Duzib116G0540 Durio zibethinus HOM05D005066 ORTHO05D006138 2.2e-33 146.4 126 59.5
AT1G76260 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 3.8e-33 145.6 129 56.6
EL10Ac1g01978 Beta vulgaris HOM05D005066 ORTHO05D006138 6.5e-33 144.8 129 55.8
C06p50230 Brassica napus HOM05D005066 ORTHO05D006138 8.4e-33 144.4 129 55.0
A07p41830 Brassica napus HOM05D005066 ORTHO05D006138 2.5e-32 142.9 129 55.0
BraA07t31713Z Brassica rapa HOM05D005066 ORTHO05D006138 2.5e-32 142.9 129 55.0
AUR62036885 Chenopodium quinoa HOM05D005066 ORTHO05D006138 2.5e-32 142.9 129 56.6
BcaC05g25960 Brassica carinata HOM05D005066 ORTHO05D006138 5.5e-32 141.7 107 59.8
C05p19110 Brassica napus HOM05D005066 ORTHO05D006138 9.3e-32 141.0 118 55.1
BolC5t30611H Brassica oleracea HOM05D005066 ORTHO05D006138 9.3e-32 141.0 118 55.1
BcaC08g47124 Brassica carinata HOM05D005066 ORTHO05D006138 1.6e-31 140.2 129 54.3
Solyc04g082300.2 Solanum lycopersicum HOM05D005066 ORTHO05D006138 1.6e-31 140.2 129 53.5
Sopen04g035920 Solanum pennellii HOM05D005066 ORTHO05D006138 1.6e-31 140.2 129 53.5
BNapus_Darmor_BZH_scaffold_170p00070 Brassica napus HOM05D005066 ORTHO05D006138 2.1e-31 139.8 105 60.0
CARHR069820 Cardamine hirsuta HOM05D005066 ORTHO05D006138 2.1e-31 139.8 129 54.3
AUR62043922 Chenopodium quinoa HOM05D005066 ORTHO05D006138 3.5e-31 139.0 129 55.8
PGSC0003DMG400009976 Solanum tuberosum HOM05D005066 ORTHO05D006138 3.5e-31 139.0 129 53.5
Hund05118 Selenicereus undatus HOM05D005066 ORTHO05D006138 1.0e-30 137.5 129 55.8
Actinidia29788 Actinidia chinensis HOM05D005066 ORTHO05D006138 5.1e-30 135.2 103 63.1
Sc15g0004490 Simmondsia chinensis HOM05D005066 ORTHO05D006138 5.1e-30 135.2 129 53.5
Lsat_1_v5_gn_2_6481 Lactuca sativa HOM05D005066 ORTHO05D006138 8.7e-30 134.4 129 51.2
unitig_26.g9893 Utricularia gibba HOM05D005066 ORTHO05D006138 2.5e-29 132.9 129 52.7
Sed0022458 Sechium edule HOM05D005066 ORTHO05D006138 4.3e-29 132.1 133 54.1
Gohir.D05G256300 Gossypium hirsutum HOM05D005066 ORTHO05D006138 9.7e-29 131.0 102 62.7
HanXRQChr14g0428271 Helianthus annuus HOM05D005066 ORTHO05D006138 1.6e-28 130.2 129 51.2
SalBow7G4394 Salvia bowleyana HOM05D005066 ORTHO05D006138 2.8e-28 129.4 108 58.3
ECA238G2025 Erigeron canadensis HOM05D005066 ORTHO05D006138 3.7e-28 129.0 129 50.4
Sabra05G0193300 Salix brachista HOM05D005066 ORTHO05D006138 1.4e-27 127.1 216 37.0
Ah.13g072510 Amaranthus hybridus HOM05D005066 ORTHO05D006138 2.0e-26 123.2 105 59.0
ClCG08G009550 Citrullus lanatus HOM05D005066 ORTHO05D006138 7.7e-26 121.3 105 60.0
TAR381G1664 Trochodendron aralioides HOM05D005066 ORTHO05D006138 1.5e-21 107.1 129 45.0
Psat5g011560 Pisum sativum HOM05D005066 ORTHO05D006138 9.7e-21 104.4 70 64.3
MELO3C026544.2 Cucumis melo HOM05D005066 ORTHO05D006138 4.7e-15 85.5 46 73.9
Haze_22758 Corylus avellana HOM05D005066 ORTHO05D006138 4.4e-13 79.0 56 75.0
PRCOL_00000380 Prasinoderma coloniale HOM05D005066 ORTHO05D006138 1.4e-11 73.9 142 31.0
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 5.9e-10 68.6 62 54.8
Cre02.g109400 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 8.5e-09 64.7 154 30.5
Cre02.g109150 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 8.0e-07 58.2 103 33.0
vmacro11236 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 2.3e-06 56.6 48 60.4
MCO04G183 Micromonas commoda HOM05D005066 ORTHO05D006138 6.7e-06 55.1 70 41.4


User provided reference genes

Program Settings