Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 9.3e-82 307.4 228 100.0
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 3.2e-42 176.0 228 72.8
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 4.7e-41 172.2 235 69.4
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 1.4e-40 170.6 181 83.4
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 1.4e-40 170.6 231 69.7
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 8.8e-40 167.9 230 70.0
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 3.4e-39 166.0 208 73.6
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 3.4e-39 166.0 233 70.0
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 4.4e-39 165.6 171 81.9
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 7.5e-39 164.9 227 69.6
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 7.5e-39 164.9 241 69.3
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 7.5e-39 164.9 205 76.1
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 1.7e-38 163.7 219 70.8
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 2.2e-38 163.3 171 84.2
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 2.2e-38 163.3 171 85.4
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 2.2e-38 163.3 231 69.3
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 2.8e-38 162.9 226 70.8
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 2.8e-38 162.9 236 64.0
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 8.3e-38 161.4 184 79.9
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 1.1e-37 161.0 171 85.4
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 1.1e-37 161.0 229 69.4
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 1.1e-37 161.0 207 71.0
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.4e-37 160.6 207 70.5
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.8e-37 160.2 171 83.6
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.8e-37 160.2 184 79.3
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 2.4e-37 159.8 182 80.2
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 2.4e-37 159.8 168 77.4
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 4.1e-37 159.1 228 70.6
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 5.4e-37 158.7 182 80.2
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 5.4e-37 158.7 184 72.3
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 5.4e-37 158.7 203 74.4
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 7.0e-37 158.3 183 80.9
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 1.2e-36 157.5 171 81.3
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 1.2e-36 157.5 228 69.7
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 1.2e-36 157.5 182 78.0
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 1.6e-36 157.1 235 68.9
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.6e-36 157.1 184 76.6
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 2.0e-36 156.8 207 69.6
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 2.7e-36 156.4 232 64.7
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 4.5e-36 155.6 184 66.8
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 5.9e-36 155.2 230 67.0
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 7.7e-36 154.8 171 83.0
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 1.3e-35 154.1 192 77.1
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 1.3e-35 154.1 173 83.2
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 1.7e-35 153.7 182 81.3
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.3e-35 153.3 234 67.9
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 2.3e-35 153.3 204 70.1
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 8.6e-35 151.4 228 65.4
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 3.3e-34 149.4 186 78.5
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 4.2e-34 149.1 228 67.5
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 2.8e-33 146.4 235 63.4
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 3.6e-33 146.0 172 82.0
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 6.1e-33 145.2 188 68.1
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 8.0e-33 144.8 231 62.3
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 8.0e-33 144.8 176 75.0
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 1.0e-32 144.4 231 62.8
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.3e-32 143.3 231 62.3
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.3e-32 143.3 228 63.2
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.3e-32 143.3 230 62.6
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 4.0e-32 142.5 166 83.7
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 5.2e-32 142.1 171 75.4
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 8.9e-32 141.4 168 75.0
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.2e-31 141.0 228 65.4
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 2.0e-31 140.2 172 79.1
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.3e-30 137.5 189 68.8
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 1.7e-30 137.1 228 63.2
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 1.4e-29 134.0 234 64.5
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 3.2e-29 132.9 240 54.2
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 4.1e-29 132.5 165 76.4
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 4.1e-29 132.5 229 59.4
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 5.4e-29 132.1 238 61.3
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.5e-28 129.4 252 45.2
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 7.8e-28 128.3 229 65.1
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.0e-27 127.9 144 88.9
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 1.3e-27 127.5 207 67.6
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 6.6e-27 125.2 179 68.7
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 6.6e-27 125.2 179 68.7
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 6.6e-27 125.2 179 68.7
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 6.6e-27 125.2 230 62.2
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 8.6e-27 124.8 205 63.9
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 1.1e-26 124.4 179 70.9
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 1.5e-26 124.0 183 69.4
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 2.5e-26 123.2 179 70.4
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 4.3e-26 122.5 142 88.0
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 5.6e-26 122.1 230 61.7
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 9.5e-26 121.3 184 68.5
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 1.2e-25 120.9 216 65.7
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.6e-25 120.6 214 61.7
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 8.0e-25 118.2 156 74.4
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 8.0e-25 118.2 212 63.2
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.0e-24 117.9 172 73.3
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.0e-24 117.9 184 69.0
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 1.5e-23 114.0 170 71.2
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 8.3e-22 108.2 230 49.6
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 1.1e-21 107.8 170 63.5
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.4e-21 107.5 115 58.3
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 3.2e-21 106.3 115 58.3
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 2.7e-20 103.2 113 56.6
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.7e-19 100.5 166 75.9
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 1.5e-18 97.4 126 88.9
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 2.5e-18 96.7 139 77.0
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.5e-18 96.7 56 78.6
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 7.3e-18 95.1 147 69.4
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 6.8e-16 88.6 239 41.8
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 3.4e-15 86.3 117 52.1
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 3.4e-15 86.3 201 64.2
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 5.8e-15 85.5 50 80.0
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 5.8e-15 85.5 64 68.8
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 2.9e-14 83.2 113 49.6
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 3.5e-12 76.3 56 71.4
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 3.0e-11 73.2 37 86.5
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 5.1e-11 72.4 51 66.7
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 6.8e-08 62.0 38 71.1
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 3.4e-07 59.7 37 70.3
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 7.6e-07 58.5 37 75.7


User provided reference genes

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