Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 0.0e+00 1374.0 686 100.0
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 5.6e-215 751.5 653 63.9
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 6.7e-184 648.3 653 56.2
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 8.8e-184 647.9 666 56.6
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 1.3e-182 644.0 651 56.8
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 9.1e-181 637.9 656 56.1
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.2e-180 637.5 654 56.0
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.5e-180 637.1 654 55.8
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 5.9e-180 635.2 660 55.0
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.4e-178 630.6 653 55.3
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 7.2e-178 628.2 617 56.6
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 7.9e-177 624.8 653 54.1
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 7.4e-175 618.2 652 52.9
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 4.8e-174 615.5 659 52.8
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 1.8e-173 613.6 649 52.7
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 2.4e-173 613.2 619 56.7
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 9.1e-173 611.3 614 57.2
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 7.7e-172 608.2 610 57.0
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 3.8e-171 605.9 651 51.9
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 5.0e-171 605.5 622 56.1
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 6.5e-171 605.1 689 51.2
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 8.5e-171 604.7 655 52.2
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 1.9e-170 603.6 687 52.3
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 2.1e-169 600.1 658 53.0
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.7e-169 599.7 655 51.6
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 4.0e-168 595.9 673 51.0
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 6.7e-168 595.1 655 52.4
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 8.8e-168 594.7 674 52.7
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.5e-167 594.0 610 56.4
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 2.6e-167 593.2 668 51.3
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 2.6e-167 593.2 656 53.0
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 3.3e-167 592.8 657 51.8
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 7.5e-167 591.7 661 52.0
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.7e-166 590.5 611 56.3
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 4.8e-166 589.0 621 55.2
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 1.4e-165 587.4 656 52.6
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 7.0e-165 585.1 610 55.1
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 1.2e-161 574.3 650 49.7
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 4.7e-161 572.4 566 54.8
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 4.7e-161 572.4 651 51.3
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 5.2e-160 568.9 580 54.7
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 2.6e-159 566.6 571 53.8
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 9.8e-159 564.7 602 53.5
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 4.8e-158 562.4 628 53.3
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 6.3e-158 562.0 656 51.5
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 8.3e-158 561.6 651 50.4
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 1.4e-157 560.8 658 50.8
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 7.0e-157 558.5 607 52.6
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 7.0e-157 558.5 613 52.0
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 4.5e-156 555.8 653 49.6
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.0e-155 554.7 556 56.3
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.3e-155 554.3 660 50.2
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.3e-155 554.3 659 50.8
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 6.5e-155 552.0 623 51.0
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 6.5e-155 552.0 654 50.6
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.5e-154 550.8 548 56.8
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.9e-154 550.4 655 48.5
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 3.2e-154 549.7 553 55.3
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 4.2e-154 549.3 653 50.2
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 9.5e-154 548.1 662 49.8
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.6e-153 547.4 656 51.2
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 1.6e-153 547.4 659 49.6
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 1.4e-152 544.3 654 48.9
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 1.8e-152 543.9 662 49.7
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 1.8e-152 543.9 651 48.8
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 8.8e-152 541.6 673 50.2
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 2.0e-151 540.4 651 47.9
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 5.7e-151 538.9 654 48.6
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 1.3e-150 537.7 650 50.6
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 2.2e-150 537.0 560 54.3
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 2.2e-150 537.0 654 49.1
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 8.3e-150 535.0 550 56.4
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 4.1e-149 532.7 645 48.4
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 5.4e-149 532.3 588 49.7
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 7.0e-149 531.9 606 51.5
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 7.0e-149 531.9 549 53.7
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 1.2e-148 531.2 544 53.5
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 2.7e-148 530.0 638 48.9
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 5.9e-148 528.9 710 46.5
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 1.0e-147 528.1 606 49.8
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 1.7e-147 527.3 667 47.4
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 2.9e-147 526.6 657 48.7
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 5.0e-147 525.8 651 49.5
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 7.3e-146 521.9 649 48.8
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 3.6e-145 519.6 582 51.9
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 1.8e-144 517.3 653 47.6
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 1.2e-143 514.6 603 50.6
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 4.9e-142 509.2 623 49.6
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 2.0e-140 503.8 690 44.8
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 8.0e-137 491.9 598 50.3
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 2.0e-135 487.3 503 52.5
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.4e-133 481.1 523 52.2
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.1e-133 479.6 447 56.8
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.2e-132 478.0 686 44.3
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 3.9e-131 473.0 558 48.7
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 1.1e-128 464.9 581 47.8
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 5.2e-120 436.0 433 53.1
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 8.7e-115 418.7 462 53.0
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 1.8e-104 384.4 585 41.7
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 2.7e-92 344.0 504 37.9
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 3.0e-91 340.5 517 39.7
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 8.2e-89 332.4 610 37.7
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.5e-63 248.4 330 43.3
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 6.7e-59 233.0 315 46.7
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 2.0e-50 204.9 201 58.2
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.8e-49 201.1 178 60.1
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 2.6e-42 177.9 591 28.6
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 1.2e-39 169.1 684 26.3
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 9.8e-34 149.4 428 28.5
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 1.8e-27 128.6 387 30.0
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 1.1e-21 109.4 128 49.2
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.7e-17 95.5 112 46.4
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 3.3e-13 81.3 68 61.8
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 8.1e-12 76.6 142 38.0
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 8.1e-12 76.6 142 38.0
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.0e-11 74.3 142 37.3
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.0e-11 74.3 142 37.3
Cre12.g521200 Chlamydomonas reinhardtii HOM05D004977 ORTHO05D006454 2.9e-09 68.2 347 22.2
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 6.4e-09 67.0 100 49.0
MCO13G571 Micromonas commoda HOM05D001470 ORTHO05D006756 9.2e-08 63.2 264 24.6
Mapoly0030s0061 Marchantia polymorpha HOM05D004977 ORTHO05D006454 7.8e-07 60.1 269 20.8
Solyc07g005880.3 Solanum lycopersicum HOM05D004977 ORTHO05D006454 7.8e-07 60.1 362 21.0
Sopen07g001990 Solanum pennellii HOM05D004977 ORTHO05D006454 7.8e-07 60.1 362 21.0
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 1.7e-06 58.9 293 23.5


User provided reference genes

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