Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g20783_MAGBIO Magnolia biondii HOM05D004826 ORTHO05D006367 1.2e-183 646.4 336 100.0
TAR633G1509 Trochodendron aralioides HOM05D004826 ORTHO05D006367 1.0e-108 397.5 431 54.8
PSO832G3843 Papaver somniferum HOM05D004826 ORTHO05D006367 1.4e-102 377.1 438 52.1
Dinv34775 Davidia involucrata HOM05D004826 ORTHO05D006367 2.0e-101 373.2 438 52.5
Aqoxy5G00445 Aquilegia oxysepala HOM05D004826 ORTHO05D006367 5.9e-101 371.7 429 52.2
PSO210G5512 Papaver somniferum HOM05D004826 ORTHO05D006367 5.9e-101 371.7 437 51.3
Manes.05G079700 Manihot esculenta HOM05D004826 ORTHO05D006367 9.5e-99 364.4 437 51.5
GSVIVG01001175001 Vitis vinifera HOM05D004826 ORTHO05D006367 1.8e-97 360.1 432 51.6
Hma1.2p1_0822F.1_g224300 Hydrangea macrophylla HOM05D004826 ORTHO05D006367 1.3e-95 354.0 421 50.8
Actinidia24908 Actinidia chinensis HOM05D004826 ORTHO05D006367 1.9e-94 350.1 438 50.0
TWI75G1621 Tripterygium wilfordii HOM05D004826 ORTHO05D006367 2.3e-92 343.2 433 49.7
Haze_04685 Corylus avellana HOM05D004826 ORTHO05D006367 3.0e-92 342.8 431 50.1
Potri.005G211600 Populus trichocarpa HOM05D004826 ORTHO05D006367 5.6e-91 338.6 434 47.5
CSS0031998 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 2.1e-90 336.7 438 48.2
COL.COLO4_09064 Corchorus olitorius HOM05D004826 ORTHO05D003095 2.1e-90 336.7 431 49.0
QL12p021024 Quercus lobata HOM05D004826 ORTHO05D006367 2.1e-90 336.7 340 56.5
Lj1A48T56 Lonicera japonica HOM05D004826 ORTHO05D006367 3.6e-90 335.9 437 45.8
MD03G1261900 Malus domestica HOM05D004826 ORTHO05D006367 1.1e-89 334.3 409 49.6
CSS0030159 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 1.4e-89 334.0 438 47.7
Duzib138G1281 Durio zibethinus HOM05D004826 ORTHO05D006367 1.4e-89 334.0 431 48.5
CANSAT25G1434 Cannabis sativa HOM05D004826 ORTHO05D006367 2.3e-89 333.2 438 49.8
MD11G1282600 Malus domestica HOM05D004826 ORTHO05D006367 5.2e-89 332.0 430 48.4
Thecc.01G275300 Theobroma cacao HOM05D004826 ORTHO05D006367 2.0e-88 330.1 429 48.3
FvH4_2g23260 Fragaria vesca HOM05D004826 ORTHO05D006367 4.4e-88 328.9 435 46.9
Prupe.8G238200 Prunus persica HOM05D004826 ORTHO05D006367 4.4e-88 328.9 430 47.7
DCAR_002720 Daucus carota HOM05D004826 ORTHO05D006367 9.8e-88 327.8 435 46.2
arahy.Tifrunner.gnm1.ann1.HM2HLZ Arachis hypogaea HOM05D004826 ORTHO05D006367 1.3e-87 327.4 437 49.4
FAN20G2615 Fragaria x ananassa HOM05D004826 ORTHO05D006367 1.3e-87 327.4 437 46.5
CiPaw.07G089800 Carya illinoinensis HOM05D004826 ORTHO05D006367 2.2e-87 326.6 341 56.6
Ciclev10020269m.g Citrus clementina HOM05D004826 ORTHO05D006367 2.2e-87 326.6 429 47.3
Gohir.A12G004300 Gossypium hirsutum HOM05D004826 ORTHO05D006367 2.2e-87 326.6 430 47.2
FAN15G0865 Fragaria x ananassa HOM05D004826 ORTHO05D006367 3.7e-87 325.9 437 46.2
Gorai.008G003800 Gossypium raimondii HOM05D004826 ORTHO05D006367 6.4e-87 325.1 430 47.2
HanXRQChr04g0118961 Helianthus annuus HOM05D004826 ORTHO05D006367 8.3e-87 324.7 432 47.2
arahy.Tifrunner.gnm1.ann1.ZSCD81 Arachis hypogaea HOM05D004826 ORTHO05D006367 1.1e-86 324.3 446 48.2
FAN27G1728 Fragaria x ananassa HOM05D004826 ORTHO05D006367 1.1e-86 324.3 437 46.2
FAN24G0969 Fragaria x ananassa HOM05D004826 ORTHO05D006367 1.9e-86 323.6 435 46.7
EL10Ac5g10541 Beta vulgaris HOM05D004826 ORTHO05D006367 4.6e-85 318.9 454 44.1
RcHm_v2.0_Chr6g0290561 Rosa chinensis HOM05D004826 ORTHO05D006367 4.6e-85 318.9 435 46.4
Sabra05G0161700 Salix brachista HOM05D004826 ORTHO05D006367 1.0e-84 317.8 442 44.8
Sc17g0001330 Simmondsia chinensis HOM05D004826 ORTHO05D006367 1.0e-84 317.8 420 45.5
Gohir.D12G004000 Gossypium hirsutum HOM05D004826 ORTHO05D006367 1.3e-84 317.4 429 46.4
Oeu025741.1 Olea europaea HOM05D004826 ORTHO05D006367 8.6e-84 314.7 432 47.5
Rhsim01G0273300 Rhododendron simsii HOM05D004826 ORTHO05D006367 1.1e-83 314.3 436 46.6
Cpa.g.sc2545.1 Carica papaya HOM05D004826 ORTHO05D006367 4.3e-83 312.4 473 43.6
CDE06G0967 Ceratophyllum demersum HOM05D004826 ORTHO05D006367 4.3e-83 312.4 436 43.8
ECA236G2315 Erigeron canadensis HOM05D004826 ORTHO05D006367 9.5e-83 311.2 426 46.0
AUR62032326 Chenopodium quinoa HOM05D004826 ORTHO05D006367 1.2e-82 310.8 438 45.4
PGR044G1874 Punica granatum HOM05D004826 ORTHO05D006367 1.2e-82 310.8 412 46.6
MSTRG.18248 Avicennia marina HOM05D004826 ORTHO05D006367 1.6e-82 310.5 430 45.3
Cc01_g19270 Coffea canephora HOM05D004826 ORTHO05D006367 1.6e-82 310.5 438 44.7
Phvul.001G153300 Phaseolus vulgaris HOM05D004826 ORTHO05D006367 1.6e-82 310.5 421 48.5
Glyma.19G158200 Glycine max HOM05D004826 ORTHO05D006367 3.6e-82 309.3 437 47.1
AUR62028599 Chenopodium quinoa HOM05D004826 ORTHO05D006367 6.2e-82 308.5 436 45.6
Eucgr.K03351 Eucalyptus grandis HOM05D004826 ORTHO05D006367 1.4e-81 307.4 432 44.4
Glyma.03G155900 Glycine max HOM05D004826 ORTHO05D006367 1.4e-81 307.4 428 48.4
Lj1g0007005 Lotus japonicus HOM05D004826 ORTHO05D006367 1.8e-81 307.0 439 46.2
PGSC0003DMG400005331 Solanum tuberosum HOM05D004826 ORTHO05D006367 1.8e-81 307.0 420 45.5
vmacro14910 Vaccinium macrocarpon HOM05D004826 ORTHO05D006367 1.8e-81 307.0 459 44.0
CsaV3_7G027950 Cucumis sativus L. HOM05D004826 ORTHO05D006367 1.5e-80 303.9 439 45.6
Solyc06g008700.3 Solanum lycopersicum HOM05D004826 ORTHO05D006367 3.4e-80 302.8 420 45.2
TPR.G24327 Trifolium pratense HOM05D004826 ORTHO05D006367 7.5e-80 301.6 437 46.2
Sopen06g003480 Solanum pennellii HOM05D004826 ORTHO05D006367 1.7e-79 300.4 420 44.8
VMungo1383G1287 Vigna mungo HOM05D004826 ORTHO05D006367 6.4e-79 298.5 421 47.7
MELO3C015814.2 Cucumis melo HOM05D004826 ORTHO05D006367 8.3e-79 298.1 439 44.9
THA.LOC104801247 Tarenaya hassleriana HOM05D004826 ORTHO05D006367 8.3e-79 298.1 438 44.3
Ca_08614_v3 Cicer arietinum L. HOM05D004826 ORTHO05D006367 1.4e-78 297.4 435 46.2
AL1G12580 Arabidopsis lyrata HOM05D004826 ORTHO05D006367 1.9e-78 297.0 438 44.5
Thhalv10007706m.g Eutrema salsugineum HOM05D004826 ORTHO05D006367 4.1e-78 295.8 438 44.7
Peaxi162Scf00572g00217 Petunia axillaris HOM05D004826 ORTHO05D006367 5.4e-78 295.4 422 43.6
Migut.D00320 Erythranthe guttata HOM05D004826 ORTHO05D006367 7.1e-78 295.0 437 45.1
Medtr7g095190 Medicago truncatula HOM05D004826 ORTHO05D006367 7.1e-78 295.0 436 46.1
AT1G03110 Arabidopsis thaliana HOM05D004826 ORTHO05D006367 9.2e-78 294.7 434 44.7
Lalb_Chr01g0020091 Lupinus albus HOM05D004826 ORTHO05D006367 1.2e-77 294.3 431 46.4
Os03g0746800 Oryza sativa ssp. japonica HOM05D004826 ORTHO05D006367 2.1e-77 293.5 432 41.9
Psat3g063080 Pisum sativum HOM05D004826 ORTHO05D006367 6.0e-77 292.0 437 45.8
Hma1.2p1_0822F.1_g224310 Hydrangea macrophylla HOM05D004826 ORTHO05D006367 1.3e-76 290.8 304 54.9
ClCG09G007220 Citrullus lanatus HOM05D004826 ORTHO05D006367 3.0e-76 289.7 477 42.6
Carub.0001s0225 Capsella rubella HOM05D004826 ORTHO05D006367 8.6e-76 288.1 436 44.3
Aa31LG1G9410 Aethionema arabicum HOM05D004826 ORTHO05D006367 4.3e-75 285.8 455 42.4
CARHR002460 Cardamine hirsuta HOM05D004826 ORTHO05D006367 4.3e-75 285.8 424 44.6
C08p00410 Brassica napus HOM05D004826 ORTHO05D006367 5.6e-75 285.4 434 43.8
BolC8t46840H Brassica oleracea HOM05D004826 ORTHO05D006367 3.6e-74 282.7 442 43.0
Sp1g02120 Schrenkiella parvula HOM05D004826 ORTHO05D006367 4.7e-74 282.3 436 43.6
SalBow4G1440 Salvia bowleyana HOM05D004826 ORTHO05D006367 6.2e-74 282.0 334 51.8
Sed0001689 Sechium edule HOM05D004826 ORTHO05D006367 6.2e-74 282.0 338 50.3
C08p52920 Brassica napus HOM05D004826 ORTHO05D002453 6.8e-73 278.5 414 43.5
HPP92_006117 Vanilla planifolia HOM05D004826 ORTHO05D006367 1.2e-72 277.7 331 47.7
BolC8t52808H Brassica oleracea HOM05D004826 ORTHO05D002453 1.5e-72 277.3 421 42.8
Ah.02g110880 Amaranthus hybridus HOM05D004826 ORTHO05D006367 2.0e-72 276.9 413 44.3
BcaC07g42266 Brassica carinata HOM05D004826 ORTHO05D002453 9.9e-72 274.6 427 42.4
A08p37480 Brassica napus HOM05D004826 ORTHO05D006367 1.7e-71 273.9 433 42.7
BraA09t42171Z Brassica rapa HOM05D004826 ORTHO05D002453 2.9e-71 273.1 432 42.1
BraA08t35646Z Brassica rapa HOM05D004826 ORTHO05D006367 1.1e-70 271.2 443 41.8
C05p01720 Brassica napus HOM05D004826 ORTHO05D006367 3.2e-70 269.6 429 43.1
Ca_08622_v3 Cicer arietinum L. HOM05D004826 ORTHO05D006367 4.6e-69 265.8 426 43.0
Nn1g02359 Nelumbo nucifera HOM05D004826 ORTHO05D006367 4.6e-69 265.8 276 54.3
A09p68350 Brassica napus HOM05D004826 ORTHO05D002453 7.8e-69 265.0 432 41.9
Lsat_1_v5_gn_8_56761 Lactuca sativa HOM05D004826 ORTHO05D006367 5.1e-68 262.3 293 50.5
A10p01740 Brassica napus HOM05D004826 ORTHO05D006367 5.8e-64 248.8 391 43.5
Zm00001eb215000 Zea mays HOM05D004826 ORTHO05D006367 1.2e-61 241.1 399 40.9
SEGI_35891 Sequoiadendron giganteum HOM05D004826 ORTHO05D006367 4.8e-58 229.2 435 39.3
Atru.chr5.1473 Acer truncatum HOM05D004826 ORTHO05D006367 8.1e-58 228.4 239 53.6
SMO358G0471 Selaginella moellendorffii HOM05D004826 ORTHO05D006367 1.8e-52 210.7 439 36.4
SGA_v2.0_scaffold138G35320 Striga asiatica HOM05D004826 ORTHO05D006367 3.1e-49 199.9 330 40.9
RcHm_v2.0_Chr6g0290571 Rosa chinensis HOM05D004826 ORTHO05D006367 5.8e-48 195.7 202 52.0
unitig_0.g133 Utricularia gibba HOM05D004826 ORTHO05D006367 5.8e-48 195.7 398 35.4
SHI16389 Sapria himalayana HOM05D000105 ORTHO05D000023 6.5e-47 192.2 138 64.5
BraA10t42449Z Brassica rapa HOM05D004826 ORTHO05D006367 5.5e-46 189.1 269 44.6
Nitab4.5_0005696g0030 Nicotiana tabacum HOM05D004826 ORTHO05D006367 7.4e-43 178.7 279 41.9
Mapoly0048s0007 Marchantia polymorpha HOM05D004826 ORTHO05D006367 2.8e-42 176.8 461 32.5
Pp3c3_10370 Physcomitrium patens HOM05D004826 ORTHO05D006367 1.2e-40 171.4 333 36.9
BcaNung01308 Brassica carinata HOM05D004826 ORTHO05D006367 4.5e-40 169.5 261 41.0
BcaNung01310 Brassica carinata HOM05D004826 ORTHO05D006367 3.8e-39 166.4 356 34.8
AagrBONN_evm.TU.Sc2ySwM_228.3229 Anthoceros agrestis HOM05D011762 ORTHO05D014803 9.3e-38 161.8 337 37.1
BolC1t00008H Brassica oleracea HOM05D004826 ORTHO05D006367 2.7e-37 160.2 370 33.8
C01p00020 Brassica napus HOM05D004826 ORTHO05D006367 3.5e-37 159.8 370 33.8
CSS0007905 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 3.9e-36 156.4 121 61.2
CSS0022346 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 1.3e-34 151.4 103 68.9
Actinidia21127 Actinidia chinensis HOM05D004826 ORTHO05D006367 4.5e-32 142.9 322 38.8
BolC5t28951H Brassica oleracea HOM05D004826 ORTHO05D006367 4.5e-32 142.9 255 40.8
CBR_g19915 Chara braunii HOM05D004826 ORTHO05D006367 7.2e-30 135.6 157 46.5
BolC1t00011H Brassica oleracea HOM05D004826 ORTHO05D006367 2.0e-27 127.5 222 37.4
Hund02828 Selenicereus undatus HOM05D004826 ORTHO05D006367 6.3e-26 122.5 127 58.3
Hund27937 Selenicereus undatus HOM05D004826 ORTHO05D006367 6.3e-26 122.5 127 58.3
Lj1C48G4 Lonicera japonica HOM05D000001 ORTHO05D000003 1.4e-25 121.3 175 45.1
TAR362G0739 Trochodendron aralioides HOM05D004826 ORTHO05D006367 1.6e-21 107.8 258 36.4
Nitab4.5_0025955g0010 Nicotiana tabacum HOM05D004826 ORTHO05D006367 1.8e-20 104.4 206 38.8
SGA_v2.0_scaffold1G00502 Striga asiatica HOM05D004826 ORTHO05D006367 2.3e-20 104.0 135 49.6
QL12p021035 Quercus lobata HOM05D004826 ORTHO05D006367 4.4e-19 99.8 197 40.1
ATR0665G626 Amborella trichopoda HOM05D004826 ORTHO05D006367 1.7e-18 97.8 101 50.5
Cre08.g374800 Chlamydomonas reinhardtii HOM05D004826 ORTHO05D006367 2.0e-16 90.9 172 30.2
SHI16388 Sapria himalayana HOM05D004826 ORTHO05D006367 4.7e-13 79.7 136 45.6
CDE07G1977 Ceratophyllum demersum HOM05D003852 ORTHO05D003095 2.6e-11 73.9 58 67.2
PRCOL_00006778 Prasinoderma coloniale HOM05D004826 ORTHO05D006367 2.2e-10 70.9 365 28.8
BcaC05g24557 Brassica carinata HOM05D001359 ORTHO05D001200 2.4e-09 67.4 199 33.2
Oeu040654.1 Olea europaea HOM05D004826 ORTHO05D006367 4.2e-06 56.6 99 41.4
TWI12G0215 Tripterygium wilfordii HOM05D004826 ORTHO05D006367 5.5e-06 56.2 51 54.9
BraA09t42133Z Brassica rapa HOM05D004826 ORTHO05D006367 9.4e-06 55.5 86 46.5


User provided reference genes

Program Settings