Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g05626_MAGBIO Magnolia biondii HOM05D001053 ORTHO05D008267 1.5e-35 152.1 70 100.0
MBI17_g28776_MAGBIO Magnolia biondii HOM05D001053 ORTHO05D008267 1.3e-13 79.3 44 81.8
Hma1.2p1_0568F.1_g180150 Hydrangea macrophylla HOM05D001053 ORTHO05D008267 4.1e-12 74.3 44 70.5
Dinv08143 Davidia involucrata HOM05D001053 ORTHO05D008267 2.0e-11 72.0 44 70.5
Nitab4.5_0000380g0080 Nicotiana tabacum HOM05D001053 ORTHO05D008267 2.0e-11 72.0 44 70.5
COL.COLO4_10188 Corchorus olitorius HOM05D001053 ORTHO05D008267 2.6e-11 71.6 44 70.5
FvH4_3g26560 Fragaria vesca HOM05D001053 ORTHO05D008267 2.6e-11 71.6 44 70.5
FAN21G1240 Fragaria x ananassa HOM05D001053 ORTHO05D008267 2.6e-11 71.6 44 70.5
FAN25G2103 Fragaria x ananassa HOM05D001053 ORTHO05D008267 2.6e-11 71.6 44 70.5
Prupe.6G143900 Prunus persica HOM05D001053 ORTHO05D008267 2.6e-11 71.6 44 70.5
RcHm_v2.0_Chr5g0048241 Rosa chinensis HOM05D001053 ORTHO05D008267 2.6e-11 71.6 44 70.5
Ca_16360_v3 Cicer arietinum L. HOM05D001053 ORTHO05D008267 3.5e-11 71.2 44 68.2
MD03G1154900 Malus domestica HOM05D001053 ORTHO05D008267 3.5e-11 71.2 44 68.2
Nn2g14308 Nelumbo nucifera HOM05D001053 ORTHO05D008267 3.5e-11 71.2 44 70.5
Cfa009938 Carpinus fangiana HOM05D001053 ORTHO05D008267 4.5e-11 70.9 44 68.2
Migut.N02457 Erythranthe guttata HOM05D001053 ORTHO05D008267 5.9e-11 70.5 44 68.2
Nitab4.5_0001491g0080 Nicotiana tabacum HOM05D001053 ORTHO05D008267 5.9e-11 70.5 44 68.2
Psat5g260600 Pisum sativum HOM05D001053 ORTHO05D008267 5.9e-11 70.5 44 68.2
QL01p020087 Quercus lobata HOM05D001053 ORTHO05D008267 5.9e-11 70.5 44 68.2
Ciclev10028632m.g Citrus clementina HOM05D001053 ORTHO05D008267 7.7e-11 70.1 44 65.9
Medtr2g087270 Medicago truncatula HOM05D001053 ORTHO05D008267 7.7e-11 70.1 44 65.9
Solyc06g074080.3 Solanum lycopersicum HOM05D001053 ORTHO05D008267 7.7e-11 70.1 44 68.2
ATR0772G212 Amborella trichopoda HOM05D001053 ORTHO05D008267 1.0e-10 69.7 44 68.2
Haze_23305 Corylus avellana HOM05D001053 ORTHO05D008267 1.0e-10 69.7 44 65.9
Sabra09G0011800 Salix brachista HOM05D001053 ORTHO05D008267 1.0e-10 69.7 44 65.9
CAN.G1726.5 Capsicum annuum HOM05D001053 ORTHO05D008267 1.3e-10 69.3 44 68.2
Glyma.12G188200 Glycine max HOM05D001053 ORTHO05D008267 1.3e-10 69.3 44 65.9
PSO339G0152 Papaver somniferum HOM05D001053 ORTHO05D008267 1.3e-10 69.3 44 65.9
PSO384G0168 Papaver somniferum HOM05D001053 ORTHO05D008267 1.3e-10 69.3 44 65.9
SGA_v2.0_scaffold268G46226 Striga asiatica HOM05D001053 ORTHO05D008267 1.3e-10 69.3 44 65.9
CDE08G1660 Ceratophyllum demersum HOM05D001053 ORTHO05D008267 1.7e-10 68.9 44 65.9
MELO3C025575.2 Cucumis melo HOM05D001053 ORTHO05D008267 1.7e-10 68.9 44 63.6
Peaxi162Scf00098g00013 Petunia axillaris HOM05D001053 ORTHO05D008267 1.7e-10 68.9 44 65.9
Potri.009G020500 Populus trichocarpa HOM05D001053 ORTHO05D008267 1.7e-10 68.9 44 65.9
Aqoxy1G00657 Aquilegia oxysepala HOM05D001053 ORTHO05D008267 2.2e-10 68.6 44 68.2
Lsat_1_v5_gn_2_35600 Lactuca sativa HOM05D001053 ORTHO05D008267 2.2e-10 68.6 44 61.4
PGSC0003DMG400005895 Solanum tuberosum HOM05D001053 ORTHO05D008267 2.2e-10 68.6 44 65.9
CiPaw.14G094600 Carya illinoinensis HOM05D001053 ORTHO05D008267 2.9e-10 68.2 44 63.6
Sed0017478 Sechium edule HOM05D001053 ORTHO05D008267 2.9e-10 68.2 44 65.9
Hund18794 Selenicereus undatus HOM05D001053 ORTHO05D008267 2.9e-10 68.2 44 68.2
TPR.G4207 Trifolium pratense HOM05D001053 ORTHO05D008267 2.9e-10 68.2 44 65.9
Ah.15g100120 Amaranthus hybridus HOM05D001053 ORTHO05D008267 3.8e-10 67.8 44 61.4
MSTRG.17683 Avicennia marina HOM05D001053 ORTHO05D008267 3.8e-10 67.8 44 65.9
Duzib170G0708 Durio zibethinus HOM05D001053 ORTHO05D008267 3.8e-10 67.8 44 63.6
Gohir.D13G225800 Gossypium hirsutum HOM05D001053 ORTHO05D008267 3.8e-10 67.8 44 61.4
TWI79G0844 Tripterygium wilfordii HOM05D001053 ORTHO05D008267 3.8e-10 67.8 44 61.4
ClCG01G011570 Citrullus lanatus HOM05D001053 ORTHO05D008267 5.0e-10 67.4 44 63.6
Eucgr.J00560 Eucalyptus grandis HOM05D001053 ORTHO05D008267 5.0e-10 67.4 44 65.9
EL10Ac7g16307 Beta vulgaris HOM05D001053 ORTHO05D008267 6.5e-10 67.0 44 63.6
Lj2A978G21 Lonicera japonica HOM05D001053 ORTHO05D008267 6.5e-10 67.0 46 60.9
Lj3g0024965 Lotus japonicus HOM05D001053 ORTHO05D008267 6.5e-10 67.0 44 63.6
Manes.01G159100 Manihot esculenta HOM05D001053 ORTHO05D008267 6.5e-10 67.0 44 63.6
unitig_27.g25027 Utricularia gibba HOM05D001053 ORTHO05D008267 6.5e-10 67.0 44 61.4
vmacro14322 Vaccinium macrocarpon HOM05D001053 ORTHO05D008267 6.5e-10 67.0 44 59.1
arahy.Tifrunner.gnm1.ann1.MVN91E Arachis hypogaea HOM05D001053 ORTHO05D008267 8.5e-10 66.6 44 65.9
arahy.Tifrunner.gnm1.ann1.Z2UDZG Arachis hypogaea HOM05D001053 ORTHO05D008267 8.5e-10 66.6 44 65.9
CsaV3_UNG232240 Cucumis sativus L. HOM05D001053 ORTHO05D008267 8.5e-10 66.6 44 61.4
SEGI_09415 Sequoiadendron giganteum HOM05D001053 ORTHO05D008267 8.5e-10 66.6 44 63.6
CSS0009786 Camellia sinensis var. sinensis HOM05D001053 ORTHO05D008267 1.1e-09 66.2 44 61.4
CSS0049177 Camellia sinensis var. sinensis HOM05D001053 ORTHO05D008267 1.1e-09 66.2 44 61.4
DCAR_018202 Daucus carota HOM05D001053 ORTHO05D008267 1.1e-09 66.2 44 59.1
ECA238G2405 Erigeron canadensis HOM05D001053 ORTHO05D008267 1.1e-09 66.2 44 59.1
Rhsim01G0201400 Rhododendron simsii HOM05D001053 ORTHO05D008267 1.1e-09 66.2 42 64.3
Sp1g07100 Schrenkiella parvula HOM05D001053 ORTHO05D008267 1.5e-09 65.9 42 69.0
Atru.chr3.3124 Acer truncatum HOM05D001053 ORTHO05D008267 1.9e-09 65.5 44 63.6
HanXRQChr02g0059831 Helianthus annuus HOM05D001053 ORTHO05D008267 1.9e-09 65.5 44 61.4
Sc21g0006820 Simmondsia chinensis HOM05D001053 ORTHO05D008267 1.9e-09 65.5 44 61.4
Gohir.A13G221801 Gossypium hirsutum HOM05D001053 ORTHO05D008267 2.5e-09 65.1 44 59.1
Gorai.013G256700 Gossypium raimondii HOM05D001053 ORTHO05D008267 2.5e-09 65.1 44 59.1
PGR119G1703 Punica granatum HOM05D001053 ORTHO05D008267 2.5e-09 65.1 44 61.4
Thecc.09G273600 Theobroma cacao HOM05D001053 ORTHO05D008267 2.5e-09 65.1 42 64.3
CANSAT54G1254 Cannabis sativa HOM05D001053 ORTHO05D008267 3.2e-09 64.7 42 61.9
BolC8t52529H Brassica oleracea HOM05D001053 ORTHO05D008267 4.2e-09 64.3 44 61.4
VMungo1080G1022 Vigna mungo HOM05D001053 ORTHO05D008267 4.2e-09 64.3 44 63.6
Phvul.005G120200 Phaseolus vulgaris HOM05D001053 ORTHO05D008267 5.5e-09 63.9 42 66.7
A09p65890 Brassica napus HOM05D001053 ORTHO05D008267 7.2e-09 63.5 44 61.4
BraA09t41933Z Brassica rapa HOM05D001053 ORTHO05D008267 7.2e-09 63.5 44 61.4
Thhalv10007924m.g Eutrema salsugineum HOM05D001053 ORTHO05D008267 7.2e-09 63.5 42 61.9
AT1G08460 Arabidopsis thaliana HOM05D001053 ORTHO05D008267 9.4e-09 63.2 42 64.3
CANSAT25G3169 Cannabis sativa HOM05D001053 ORTHO05D008267 9.4e-09 63.2 42 59.5
Os05g0440250 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D008267 9.4e-09 63.2 42 61.9
THA.LOC104800509 Tarenaya hassleriana HOM05D001053 ORTHO05D008267 9.4e-09 63.2 42 64.3
Zm00001eb348390 Zea mays HOM05D001053 ORTHO05D008267 9.4e-09 63.2 42 61.9
Zm00001eb348460 Zea mays HOM05D001053 ORTHO05D008267 9.4e-09 63.2 42 61.9
AL1G18880 Arabidopsis lyrata HOM05D001053 ORTHO05D008267 1.2e-08 62.8 42 64.3
C08p49990 Brassica napus HOM05D001053 ORTHO05D008267 1.2e-08 62.8 44 61.4
Os05g0440632 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D008267 1.2e-08 62.8 42 61.9
VMungo1215G1713 Vigna mungo HOM05D001053 ORTHO05D008267 1.2e-08 62.8 44 63.6
AUR62020235 Chenopodium quinoa HOM05D001053 ORTHO05D008267 1.6e-08 62.4 44 59.1
CARHR008340 Cardamine hirsuta HOM05D001053 ORTHO05D008267 2.1e-08 62.0 44 59.1
HPP92_000061 Vanilla planifolia HOM05D001053 ORTHO05D008267 2.1e-08 62.0 42 61.9
Carub.0001s0781 Capsella rubella HOM05D001053 ORTHO05D008267 6.1e-08 60.5 42 61.9
Aa31sc139G30 Aethionema arabicum HOM05D001053 ORTHO05D008267 1.4e-07 59.3 44 56.8
BcaC07g41944 Brassica carinata HOM05D001053 ORTHO05D008267 1.8e-07 58.9 37 70.3
Pp3c13_17860 Physcomitrium patens HOM05D001053 ORTHO05D008267 2.3e-07 58.5 44 56.8
Cc01_g08510 Coffea canephora HOM05D001053 ORTHO05D008267 5.2e-07 57.4 31 77.4
HanXRQChr09g0251781 Helianthus annuus HOM05D001053 ORTHO05D008267 2.0e-06 55.5 44 52.3
GSVIVG01036156001 Vitis vinifera HOM05D001053 ORTHO05D008267 2.6e-06 55.1 31 74.2
HanXRQChr10g0300651 Helianthus annuus HOM05D001053 ORTHO05D008267 3.3e-06 54.7 44 52.3
AagrBONN_evm.TU.Sc2ySwM_228.4175 Anthoceros agrestis HOM05D001053 ORTHO05D008267 5.7e-06 53.9 42 54.8
Lalb_Chr14g0375981 Lupinus albus HOM05D001053 ORTHO05D008267 5.7e-06 53.9 31 74.2
Mapoly0214s0003 Marchantia polymorpha HOM05D001053 ORTHO05D008267 7.5e-06 53.5 42 52.4


User provided reference genes

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