Gene: COL.COLO4_10188
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_10188
- Transcript Identifier COL.rna8983
- Gene Type Coding gene
- Location AWUE01014409.1 : 5583-7664 : positive
Gene Family Information
- ID HOM05D001053
- #Genes/#Species 576/99
- Phylogenetic origin
- ID ORTHO05D008267
- #Genes/#Species 121/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna8983
- GenBank OMP03815.1
- id gene10160
- gene_name COLO4_10188
- uniprot A0A1R3K9N6
Descriptions
- Description Histone deacetylase superfamily
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070932 | IEA | GOA Database | histone H3 deacetylation | |
| GO:0016575 | IEA | GOA Database | histone deacetylation | |
| GO:0006325 | IEA | GOA Database | chromatin organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004407 | IEA | GOA Database | histone deacetylase activity | |
| GO:0032041 | IEA | GOA Database | NAD-dependent histone deacetylase activity (H3-K14 specific) |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G08460 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G08460 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.2.1.1.3 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8) |
| 12.3.2.1.2 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase |