Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 3.8e-111 404.8 203 100.0
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 2.4e-105 385.6 204 96.1
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 1.6e-77 293.1 203 75.9
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 1.1e-73 280.4 206 72.3
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 1.9e-73 279.6 156 91.0
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 6.0e-72 274.6 206 70.4
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 4.3e-70 268.5 207 68.6
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 8.1e-69 264.2 204 70.1
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 1.4e-68 263.5 205 69.3
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 5.2e-68 261.5 205 69.3
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 2.6e-67 259.2 206 68.9
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 1.3e-66 256.9 215 67.0
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 2.2e-66 256.1 207 68.6
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 1.1e-65 253.8 209 66.0
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.2e-65 252.3 206 65.5
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 6.0e-64 248.1 141 87.9
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.1e-63 245.0 205 65.4
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 6.6e-63 244.6 207 64.7
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 9.6e-62 240.7 142 85.2
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 4.7e-61 238.4 204 65.7
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 8.1e-61 237.7 205 65.4
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 1.1e-60 237.3 204 65.2
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 3.4e-59 232.3 207 61.8
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 1.1e-57 227.3 204 62.3
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 1.4e-57 226.9 144 81.9
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 3.2e-57 225.7 213 61.0
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 7.1e-57 224.6 207 60.9
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 9.3e-57 224.2 217 59.9
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 1.6e-56 223.4 217 59.9
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-56 223.4 203 62.6
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 2.3e-55 219.5 162 70.4
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 6.6e-55 218.0 213 59.6
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.6e-55 218.0 203 60.6
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 1.9e-54 216.5 213 59.2
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 1.9e-54 216.5 213 59.2
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 1.9e-54 216.5 213 59.2
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 1.9e-54 216.5 213 59.2
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 2.5e-54 216.1 195 61.5
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 4.3e-54 215.3 213 59.2
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 3.6e-53 212.2 207 60.9
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 3.1e-52 209.1 146 74.7
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 2.0e-51 206.5 219 57.5
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 7.6e-51 204.5 204 59.8
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 6.4e-50 201.4 192 60.4
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-49 197.6 204 58.8
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-49 197.6 204 58.8
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-49 197.6 204 58.8
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 3.5e-48 195.7 204 58.3
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 7.9e-48 194.5 143 72.0
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 3.0e-47 192.6 193 58.0
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 5.1e-47 191.8 207 57.0
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 8.7e-47 191.0 207 56.0
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 2.5e-46 189.5 201 55.7
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-45 187.2 203 55.2
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-45 187.2 203 55.2
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 2.1e-45 186.4 205 55.1
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 1.1e-44 184.1 209 54.5
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-44 184.1 203 54.7
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-44 183.3 203 53.7
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 4.0e-44 182.2 207 54.6
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 2.0e-43 179.9 201 55.7
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-42 177.2 208 53.8
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.8e-42 175.6 172 59.3
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 3.8e-42 175.6 178 58.4
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 8.4e-42 174.5 154 62.3
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-41 172.9 203 50.7
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 3.2e-41 172.6 108 81.5
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 5.5e-41 171.8 135 69.6
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.2e-40 170.6 177 54.8
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.6e-40 170.2 115 75.7
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 3.0e-39 166.0 122 73.0
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 3.0e-39 166.0 194 54.1
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 1.3e-37 160.6 153 60.1
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 1.4e-36 157.1 120 69.2
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-36 156.8 193 49.7
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-35 153.7 204 49.5
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 4.9e-34 148.7 143 56.6
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 4.2e-33 145.6 203 47.8
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 9.3e-33 144.4 145 58.6
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 3.5e-32 142.5 139 60.4
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-31 140.2 194 50.0
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 5.1e-31 138.7 110 67.3
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 2.5e-30 136.3 140 58.6
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 3.7e-29 132.5 129 57.4
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 3.1e-28 129.4 178 50.6
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 7.6e-27 124.8 155 49.7
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 1.3e-26 124.0 156 48.7
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 6.5e-26 121.7 204 45.1
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-25 120.9 204 45.1
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-25 120.6 129 55.0
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 3.2e-25 119.4 151 51.0
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 3.2e-25 119.4 151 51.0
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 6.1e-24 115.2 117 53.8
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 1.8e-23 113.6 122 54.1
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 3.0e-23 112.8 125 55.2
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 5.7e-22 108.6 135 47.4
SalBow1G5399 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.3e-21 107.5 116 56.0
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-21 107.1 114 54.4
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 2.2e-21 106.7 125 52.0
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 1.8e-20 103.6 92 65.2
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.4e-20 103.2 77 74.0
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-19 100.9 119 50.4
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 2.0e-19 100.1 174 36.8
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 2.0e-19 100.1 121 46.3
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 3.4e-19 99.4 133 48.9
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 7.7e-19 98.2 92 63.0
Lsat_1_v5_gn_5_114100 Lactuca sativa HOM05D003467 ORTHO05D004220 1.7e-18 97.1 109 49.5
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 1.7e-18 97.1 111 49.5
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 9.4e-17 91.3 137 41.6
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 1.6e-16 90.5 107 54.2
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 1.6e-16 90.5 133 42.1
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 2.1e-16 90.1 122 45.9
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 6.1e-16 88.6 134 38.8
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 7.9e-16 88.2 134 38.8
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 7.9e-16 88.2 134 40.3
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 6.7e-15 85.1 80 62.5
Lsat_1_v5_gn_8_11861 Lactuca sativa HOM05D003467 ORTHO05D004220 8.8e-15 84.7 109 43.1
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 8.8e-15 84.7 144 41.0
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-14 84.0 199 36.7
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.0e-14 83.6 73 60.3
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 9.7e-14 81.3 140 45.7
Nitab4.5_0008578g0020 Nicotiana tabacum HOM05D003467 ORTHO05D004220 9.7e-14 81.3 100 50.0
SGA_v2.0_scaffold48G17845 Striga asiatica HOM05D003467 ORTHO05D004220 3.7e-13 79.3 96 50.0
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 9.1e-12 74.7 133 33.8
Phvul.008G005400 Phaseolus vulgaris HOM05D003467 ORTHO05D004220 2.0e-11 73.6 92 55.4
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 2.9e-10 69.7 90 48.9
VMungo1383G2739 Vigna mungo HOM05D003467 ORTHO05D004220 3.8e-10 69.3 92 51.1
CAN.G1447.9 Capsicum annuum HOM05D003467 ORTHO05D004220 5.0e-10 68.9 94 45.7
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-09 67.8 77 55.8
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 2.5e-09 66.6 90 47.8
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 3.2e-09 66.2 78 57.7
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 7.2e-09 65.1 134 34.3
SHI04750 Sapria himalayana HOM05D000330 ORTHO05D000209 1.6e-08 63.9 148 35.8
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 2.1e-08 63.5 89 39.3
Lsat_1_v5_gn_7_88480 Lactuca sativa HOM05D003467 ORTHO05D004220 2.1e-08 63.5 100 43.0
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 4.7e-08 62.4 89 42.7
TPR.G9704 Trifolium pratense HOM05D003467 ORTHO05D004220 1.8e-07 60.5 82 41.5
Lsat_1_v5_gn_4_83901 Lactuca sativa HOM05D003467 ORTHO05D004220 8.8e-07 58.2 92 41.3
Lsat_1_v5_gn_9_26841 Lactuca sativa HOM05D003467 ORTHO05D004220 1.1e-06 57.8 76 42.1
SalBow1G8419 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.1e-06 57.8 90 42.2
Lsat_1_v5_gn_3_107140 Lactuca sativa HOM05D003467 ORTHO05D004220 7.4e-06 55.1 92 41.3


User provided reference genes

Program Settings