Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI05_g03454_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 5.6e-170 600.9 314 100.0
TAR623G0133 Trochodendron aralioides HOM05D007125 ORTHO05D008766 1.0e-54 218.0 361 42.1
Aqoxy1G00714 Aquilegia oxysepala HOM05D007125 ORTHO05D008766 4.3e-37 159.5 347 36.9
Dinv35513 Davidia involucrata HOM05D007125 ORTHO05D008766 4.8e-36 156.0 285 37.5
PSO384G0252 Papaver somniferum HOM05D007125 ORTHO05D008766 1.9e-29 134.0 239 40.2
Thecc.05G022200 Theobroma cacao HOM05D007125 ORTHO05D008766 4.8e-28 129.4 287 36.6
Haze_20950 Corylus avellana HOM05D007125 ORTHO05D008766 1.4e-27 127.9 290 34.8
Duzib093G0828 Durio zibethinus HOM05D007125 ORTHO05D008766 4.5e-26 122.9 281 35.2
Atru.chr8.2198 Acer truncatum HOM05D007125 ORTHO05D008766 6.5e-25 119.0 261 37.5
CDE04G1007 Ceratophyllum demersum HOM05D007125 ORTHO05D008766 1.9e-24 117.5 287 35.2
COL.COLO4_14596 Corchorus olitorius HOM05D007125 ORTHO05D008766 5.5e-24 115.9 263 37.3
Potri.006G096400 Populus trichocarpa HOM05D007125 ORTHO05D008766 2.7e-23 113.6 300 31.7
Manes.08G087700 Manihot esculenta HOM05D007125 ORTHO05D008766 4.6e-23 112.8 291 33.0
Gohir.D09G158900 Gossypium hirsutum HOM05D007125 ORTHO05D008766 6.1e-23 112.5 236 37.7
Gorai.006G180600 Gossypium raimondii HOM05D007125 ORTHO05D008766 1.4e-22 111.3 253 36.8
Nn2g11366 Nelumbo nucifera HOM05D007125 ORTHO05D008766 2.6e-21 107.1 316 32.6
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 7.7e-18 95.5 265 32.8
Gohir.A09G163400 Gossypium hirsutum HOM05D007125 ORTHO05D008766 1.0e-17 95.1 204 37.7
Hma1.2p1_0763F.1_g214650 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 1.0e-17 95.1 228 32.9
Sabra06G0074100 Salix brachista HOM05D007125 ORTHO05D008766 1.0e-17 95.1 299 30.4
ClCG04G007250 Citrullus lanatus HOM05D007125 ORTHO05D008766 1.4e-16 91.3 270 33.7
CSS0003995 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 9.4e-16 88.6 260 30.8
TWI77G0961 Tripterygium wilfordii HOM05D007125 ORTHO05D008766 1.6e-15 87.8 234 32.9
PGR031G2086 Punica granatum HOM05D007125 ORTHO05D008766 7.9e-15 85.5 226 31.9
Eucgr.B02785 Eucalyptus grandis HOM05D007125 ORTHO05D008766 1.0e-14 85.1 241 30.7
CiPaw.09G206100 Carya illinoinensis HOM05D007125 ORTHO05D008766 2.3e-14 84.0 263 31.2
DCAR_024035 Daucus carota HOM05D007125 ORTHO05D008766 5.2e-14 82.8 301 27.2
CANSAT35G1716 Cannabis sativa HOM05D007125 ORTHO05D008766 3.3e-13 80.1 220 35.0
Glyma.07G144800 Glycine max HOM05D007125 ORTHO05D008766 4.4e-13 79.7 273 30.0
Lalb_Chr03g0042991 Lupinus albus HOM05D007125 ORTHO05D008766 1.8e-11 74.3 303 27.7
Lj2A79T37 Lonicera japonica HOM05D007125 ORTHO05D008766 3.1e-11 73.6 185 35.1
Phvul.008G107900 Phaseolus vulgaris HOM05D007125 ORTHO05D008766 1.2e-10 71.6 243 28.8
VMungo1383G2599 Vigna mungo HOM05D007125 ORTHO05D008766 2.0e-10 70.9 233 30.5
Medtr7g066750 Medicago truncatula HOM05D007125 ORTHO05D008766 3.5e-10 70.1 246 32.5
ATR0618G048 Amborella trichopoda HOM05D007125 ORTHO05D008766 4.5e-10 69.7 109 43.1
TPR.G40809 Trifolium pratense HOM05D007125 ORTHO05D008766 5.9e-10 69.3 269 30.9
arahy.Tifrunner.gnm1.ann1.8EY2MC Arachis hypogaea HOM05D007125 ORTHO05D008766 7.7e-10 68.9 279 31.2
arahy.Tifrunner.gnm1.ann1.A1GI61 Arachis hypogaea HOM05D007125 ORTHO05D008766 1.0e-09 68.6 279 31.2
AT3G09080 Arabidopsis thaliana HOM05D007125 ORTHO05D008766 4.2e-08 63.2 200 27.5
Lj1g0008640 Lotus japonicus HOM05D007125 ORTHO05D008766 5.5e-08 62.8 248 30.2
CsaV3_4G025990 Cucumis sativus L. HOM05D007125 ORTHO05D008766 7.2e-08 62.4 268 31.7
MELO3C003224.2 Cucumis melo HOM05D007125 ORTHO05D008766 1.2e-07 61.6 273 31.1
Sc01g0006790 Simmondsia chinensis HOM05D007125 ORTHO05D008766 3.6e-07 60.1 227 29.1
Psat3g131480 Pisum sativum HOM05D007125 ORTHO05D008766 4.7e-07 59.7 240 30.8
BolC1t05475H Brassica oleracea HOM05D007125 ORTHO05D008766 2.3e-06 57.4 202 25.7
AL3G20150 Arabidopsis lyrata HOM05D007125 ORTHO05D008766 5.2e-06 56.2 199 27.1
Aa31LG3G1610 Aethionema arabicum HOM05D007125 ORTHO05D008766 6.7e-06 55.8 186 26.3


User provided reference genes

Program Settings