Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g40115_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 5.6e-89 330.9 163 100.0
MBI07_g03816_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 5.5e-28 128.3 72 90.3
Haze_03791 Corylus avellana HOM05D000811 ORTHO05D004743 5.7e-25 118.2 75 76.0
CDE05G3463 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 7.5e-25 117.9 75 77.3
Nn5g29274 Nelumbo nucifera HOM05D000811 ORTHO05D004743 7.5e-25 117.9 92 65.2
Cfa006960 Carpinus fangiana HOM05D000811 ORTHO05D007840 9.8e-25 117.5 75 76.0
TAR625G0006 Trochodendron aralioides HOM05D000811 ORTHO05D004743 1.3e-24 117.1 75 76.0
MD08G1077500 Malus domestica HOM05D000811 ORTHO05D004743 1.7e-24 116.7 73 76.7
TAR381G1630 Trochodendron aralioides HOM05D000811 ORTHO05D004743 1.7e-24 116.7 75 76.0
Lsat_1_v5_gn_2_78761 Lactuca sativa HOM05D000811 ORTHO05D004743 2.2e-24 116.3 81 66.7
Dinv23445 Davidia involucrata HOM05D000586 ORTHO05D003356 2.8e-24 115.9 75 74.7
MD04G1047200 Malus domestica HOM05D000811 ORTHO05D004743 2.8e-24 115.9 73 75.3
Duzib264G0600 Durio zibethinus HOM05D000811 ORTHO05D004743 3.7e-24 115.5 81 69.1
Cpa.g.sc6.231 Carica papaya HOM05D000811 ORTHO05D004743 4.9e-24 115.2 75 74.7
arahy.Tifrunner.gnm1.ann1.66CB8L Arachis hypogaea HOM05D000811 ORTHO05D004743 6.3e-24 114.8 73 72.6
Dinv33618 Davidia involucrata HOM05D000811 ORTHO05D004743 6.3e-24 114.8 75 73.3
TAR628G0680 Trochodendron aralioides HOM05D000811 ORTHO05D004743 6.3e-24 114.8 75 73.3
Dinv40074 Davidia involucrata HOM05D000811 ORTHO05D004743 8.3e-24 114.4 75 72.0
Gohir.D11G044800 Gossypium hirsutum HOM05D000811 ORTHO05D004743 8.3e-24 114.4 87 62.1
Dinv41989 Davidia involucrata HOM05D000586 ORTHO05D003356 1.1e-23 114.0 75 73.3
Nitab4.5_0001133g0070 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.1e-23 114.0 76 68.4
Sabra07G0010400 Salix brachista HOM05D000811 ORTHO05D004743 1.1e-23 114.0 74 73.0
Hund16485 Selenicereus undatus HOM05D000811 ORTHO05D004743 1.1e-23 114.0 74 73.0
Nitab4.5_0006862g0010 Nicotiana tabacum HOM05D000811 ORTHO05D004743 1.4e-23 113.6 80 66.2
Prupe.1G202600 Prunus persica HOM05D000811 ORTHO05D004743 1.4e-23 113.6 73 75.3
Rhsim08G0034300 Rhododendron simsii HOM05D000811 ORTHO05D007840 1.4e-23 113.6 107 53.3
arahy.Tifrunner.gnm1.ann1.LCWP3I Arachis hypogaea HOM05D000811 ORTHO05D004743 1.8e-23 113.2 73 71.2
Eucgr.J02408 Eucalyptus grandis HOM05D000811 ORTHO05D004743 1.8e-23 113.2 86 65.1
HanXRQChr14g0441311 Helianthus annuus HOM05D000811 ORTHO05D004743 1.8e-23 113.2 75 69.3
PGSC0003DMG400001617 Solanum tuberosum HOM05D000811 ORTHO05D004743 1.8e-23 113.2 75 69.3
Actinidia27847 Actinidia chinensis HOM05D000811 ORTHO05D004743 2.4e-23 112.8 75 72.0
Lj4g0014424 Lotus japonicus HOM05D000811 ORTHO05D004743 2.4e-23 112.8 81 69.1
CDE05G3063 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 3.2e-23 112.5 94 60.6
Duzib187G1507 Durio zibethinus HOM05D000811 ORTHO05D004743 4.1e-23 112.1 81 65.4
Thecc.01G020900 Theobroma cacao HOM05D000811 ORTHO05D004743 4.1e-23 112.1 75 69.3
TPR.G30057 Trifolium pratense HOM05D000811 ORTHO05D004743 4.1e-23 112.1 75 72.0
TAR376G0878 Trochodendron aralioides HOM05D000811 ORTHO05D004743 4.1e-23 112.1 75 72.0
CSS0030860 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 5.4e-23 111.7 80 65.0
Potri.007G013400 Populus trichocarpa HOM05D000811 ORTHO05D004743 5.4e-23 111.7 73 71.2
ATR0147G012 Amborella trichopoda HOM05D000811 ORTHO05D004743 7.0e-23 111.3 75 68.0
COL.COLO4_21930 Corchorus olitorius HOM05D000811 ORTHO05D004743 7.0e-23 111.3 81 66.7
ECA238G1572 Erigeron canadensis HOM05D000811 ORTHO05D004743 7.0e-23 111.3 75 68.0
QL06p033570 Quercus lobata HOM05D000811 ORTHO05D004743 7.0e-23 111.3 75 70.7
arahy.Tifrunner.gnm1.ann1.T1352T Arachis hypogaea HOM05D000811 ORTHO05D004743 9.2e-23 110.9 73 69.9
CAN.G1329.5 Capsicum annuum HOM05D000811 ORTHO05D004743 9.2e-23 110.9 75 68.0
Duzib147G0350 Durio zibethinus HOM05D000811 ORTHO05D004743 9.2e-23 110.9 81 65.4
ECA246G0760 Erigeron canadensis HOM05D000811 ORTHO05D004743 9.2e-23 110.9 75 66.7
MBI05_g26504_MAGBIO Magnolia biondii HOM05D000811 ORTHO05D004743 9.2e-23 110.9 63 88.9
Nn6g32304 Nelumbo nucifera HOM05D000811 ORTHO05D004743 9.2e-23 110.9 75 70.7
Ca_22371_v3 Cicer arietinum L. HOM05D000811 ORTHO05D004743 1.2e-22 110.5 76 71.1
Gorai.007G048100 Gossypium raimondii HOM05D000811 ORTHO05D004743 1.2e-22 110.5 81 65.4
Hma1.2p1_0258F.1_g104200 Hydrangea macrophylla HOM05D000811 ORTHO05D004743 1.2e-22 110.5 75 68.0
Lsat_1_v5_gn_3_74081 Lactuca sativa HOM05D000811 ORTHO05D004743 1.2e-22 110.5 75 66.7
Medtr8g076070 Medicago truncatula HOM05D000811 ORTHO05D004743 1.2e-22 110.5 81 66.7
Peaxi162Scf00362g01151 Petunia axillaris HOM05D000811 ORTHO05D004743 1.2e-22 110.5 75 68.0
PGR102G1785 Punica granatum HOM05D000811 ORTHO05D004743 1.2e-22 110.5 73 71.2
SGA_v2.0_scaffold32G13256 Striga asiatica HOM05D000811 ORTHO05D004743 1.2e-22 110.5 74 73.0
SGA_v2.0_scaffold58G20433 Striga asiatica HOM05D000811 ORTHO05D004743 1.2e-22 110.5 75 70.7
TWI09G0609 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 1.2e-22 110.5 75 68.0
CSS0015066 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 1.6e-22 110.2 75 70.7
CSS0031839 Camellia sinensis var. sinensis HOM05D000811 ORTHO05D004743 1.6e-22 110.2 75 70.7
CiPaw.08G132800 Carya illinoinensis HOM05D000811 ORTHO05D004743 1.6e-22 110.2 75 70.7
Lj4A217G58 Lonicera japonica HOM05D000811 ORTHO05D004743 1.6e-22 110.2 81 64.2
Lalb_Chr05g0229881 Lupinus albus HOM05D000811 ORTHO05D004743 1.6e-22 110.2 74 67.6
Manes.01G144800 Manihot esculenta HOM05D000811 ORTHO05D004743 1.6e-22 110.2 75 70.7
Psat4g098480 Pisum sativum HOM05D000811 ORTHO05D004743 1.6e-22 110.2 76 69.7
vmacro18420 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 1.6e-22 110.2 75 69.3
Cc07_g10610 Coffea canephora HOM05D000811 ORTHO05D004743 2.0e-22 109.8 72 70.8
Glyma.02G049500 Glycine max HOM05D000811 ORTHO05D004743 2.0e-22 109.8 84 61.9
Manes.02G103000 Manihot esculenta HOM05D000811 ORTHO05D004743 2.0e-22 109.8 75 66.7
Actinidia31003 Actinidia chinensis HOM05D000811 ORTHO05D004743 2.7e-22 109.4 75 65.3
Glyma.16G129900 Glycine max HOM05D000811 ORTHO05D004743 2.7e-22 109.4 84 61.9
Oeu035303.1 Olea europaea HOM05D000811 ORTHO05D004743 2.7e-22 109.4 75 70.7
AUR62043613 Chenopodium quinoa HOM05D000811 ORTHO05D004743 3.5e-22 109.0 74 70.3
AUR62044455 Chenopodium quinoa HOM05D000811 ORTHO05D004743 3.5e-22 109.0 74 70.3
HanXRQChr15g0482841 Helianthus annuus HOM05D000811 ORTHO05D004743 3.5e-22 109.0 75 68.0
Lalb_Chr16g0391191 Lupinus albus HOM05D000811 ORTHO05D004743 3.5e-22 109.0 73 68.5
CiPaw.07G057300 Carya illinoinensis HOM05D000811 ORTHO05D004743 4.5e-22 108.6 81 64.2
CDE09G0022 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 4.5e-22 108.6 112 52.7
Solyc01g110530.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 4.5e-22 108.6 75 66.7
Sopen01g052660 Solanum pennellii HOM05D000811 ORTHO05D004743 4.5e-22 108.6 75 66.7
Hund14039 Selenicereus undatus HOM05D000811 ORTHO05D004743 5.9e-22 108.2 74 70.3
Sc16g0002050 Simmondsia chinensis HOM05D000811 ORTHO05D004743 7.8e-22 107.8 74 70.3
Ciclev10026785m.g Citrus clementina HOM05D000811 ORTHO05D004743 1.0e-21 107.5 75 66.7
Gohir.A10G097900 Gossypium hirsutum HOM05D000811 ORTHO05D004743 1.0e-21 107.5 75 68.0
Gohir.A11G041500 Gossypium hirsutum HOM05D000811 ORTHO05D004743 1.0e-21 107.5 81 63.0
Gohir.D10G090300 Gossypium hirsutum HOM05D000811 ORTHO05D004743 1.0e-21 107.5 75 68.0
Gorai.011G099300 Gossypium raimondii HOM05D000811 ORTHO05D004743 1.0e-21 107.5 75 68.0
TWI53G1676 Tripterygium wilfordii HOM05D000811 ORTHO05D004743 1.0e-21 107.5 75 66.7
Aqoxy5G01449 Aquilegia oxysepala HOM05D000811 ORTHO05D004743 1.3e-21 107.1 75 65.3
MSTRG.5435 Avicennia marina HOM05D000811 ORTHO05D004743 1.3e-21 107.1 75 68.0
EL10As8g23839 Beta vulgaris HOM05D000811 ORTHO05D004743 1.3e-21 107.1 74 67.6
ClCG07G008440 Citrullus lanatus HOM05D000811 ORTHO05D004743 1.3e-21 107.1 81 63.0
FAN09G3320 Fragaria x ananassa HOM05D000811 ORTHO05D004743 1.3e-21 107.1 75 69.3
VMungo0289G0001 Vigna mungo HOM05D000811 ORTHO05D004743 1.3e-21 107.1 73 65.8
RcHm_v2.0_Chr3g0483651 Rosa chinensis HOM05D000811 ORTHO05D004743 1.7e-21 106.7 75 68.0
CDE02G4615 Ceratophyllum demersum HOM05D000811 ORTHO05D004743 2.3e-21 106.3 75 66.7
Peaxi162Scf00799g00517 Petunia axillaris HOM05D000811 ORTHO05D004743 2.3e-21 106.3 76 61.8
BolC7t40891H Brassica oleracea HOM05D000811 ORTHO05D004743 2.9e-21 105.9 107 53.3
FvH4_6g24550 Fragaria vesca HOM05D000811 ORTHO05D004743 2.9e-21 105.9 75 68.0
FAN02G2932 Fragaria x ananassa HOM05D000811 ORTHO05D004743 2.9e-21 105.9 75 68.0
FAN14G0683 Fragaria x ananassa HOM05D000811 ORTHO05D004743 2.9e-21 105.9 75 68.0
Oeu062504.1 Olea europaea HOM05D000811 ORTHO05D004743 2.9e-21 105.9 81 65.4
C06p13450 Brassica napus HOM05D000811 ORTHO05D004743 3.9e-21 105.5 104 52.9
Migut.B00125 Erythranthe guttata HOM05D000811 ORTHO05D004743 3.9e-21 105.5 75 69.3
HanXRQChr11g0327321 Helianthus annuus HOM05D000811 ORTHO05D004743 3.9e-21 105.5 79 60.8
Aa31LG8G15220 Aethionema arabicum HOM05D000811 ORTHO05D004743 5.0e-21 105.1 73 67.1
MELO3C016378.2 Cucumis melo HOM05D000811 ORTHO05D004743 5.0e-21 105.1 73 67.1
CsaV3_4G005720 Cucumis sativus L. HOM05D000811 ORTHO05D004743 5.0e-21 105.1 81 61.7
Phvul.003G260800 Phaseolus vulgaris HOM05D000811 ORTHO05D004743 8.6e-21 104.4 73 63.0
THA.LOC104819758 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 8.6e-21 104.4 73 67.1
Ah.03g141760 Amaranthus hybridus HOM05D000811 ORTHO05D004743 1.1e-20 104.0 73 65.8
CAN.G1365.1 Capsicum annuum HOM05D000811 ORTHO05D004743 1.1e-20 104.0 86 55.8
Rhsim05G0067500 Rhododendron simsii HOM05D000811 ORTHO05D004743 1.1e-20 104.0 75 65.3
BcaB08g34786 Brassica carinata HOM05D000811 ORTHO05D004743 1.5e-20 103.6 73 65.8
A07p02600 Brassica napus HOM05D000811 ORTHO05D004743 1.5e-20 103.6 73 67.1
BolC6t36506H Brassica oleracea HOM05D000811 ORTHO05D004743 1.5e-20 103.6 103 52.4
BraA07t28059Z Brassica rapa HOM05D000811 ORTHO05D004743 1.5e-20 103.6 73 67.1
DCAR_016616 Daucus carota HOM05D000811 ORTHO05D004743 1.5e-20 103.6 75 60.0
Thhalv10022913m.g Eutrema salsugineum HOM05D000811 ORTHO05D004743 1.5e-20 103.6 73 65.8
FAN05G0499 Fragaria x ananassa HOM05D000811 ORTHO05D004743 1.5e-20 103.6 75 66.7
Solyc02g062250.3 Solanum lycopersicum HOM05D000811 ORTHO05D004743 1.5e-20 103.6 86 55.8
Sed0008902 Sechium edule HOM05D000811 ORTHO05D004743 1.9e-20 103.2 81 60.5
PGSC0003DMG400019933 Solanum tuberosum HOM05D000811 ORTHO05D004743 1.9e-20 103.2 86 55.8
THA.LOC104807488 Tarenaya hassleriana HOM05D000811 ORTHO05D004743 1.9e-20 103.2 90 55.6
vmacro17410 Vaccinium macrocarpon HOM05D000811 ORTHO05D004743 1.9e-20 103.2 75 65.3
BcaB03g16590 Brassica carinata HOM05D000811 ORTHO05D004743 2.5e-20 102.8 73 65.8
Sed0024520 Sechium edule HOM05D000811 ORTHO05D004743 2.5e-20 102.8 81 59.3
A06p33380 Brassica napus HOM05D000811 ORTHO05D004743 3.3e-20 102.4 73 64.4
BcaC06g36361 Brassica carinata HOM05D000811 ORTHO05D004743 4.3e-20 102.1 73 65.8
C07p04900 Brassica napus HOM05D000811 ORTHO05D004743 4.3e-20 102.1 73 65.8
BraA06t26271Z Brassica rapa HOM05D000811 ORTHO05D004743 4.3e-20 102.1 73 64.4
CARHR108530 Cardamine hirsuta HOM05D000811 ORTHO05D004743 4.3e-20 102.1 73 64.4
Sp3g31470 Schrenkiella parvula HOM05D000811 ORTHO05D004743 4.3e-20 102.1 73 64.4
HPP92_003523 Vanilla planifolia HOM05D000811 ORTHO05D004743 4.3e-20 102.1 74 66.2
AL3G51190 Arabidopsis lyrata HOM05D000811 ORTHO05D004743 5.6e-20 101.7 73 64.4
AT2G18040 Arabidopsis thaliana HOM05D000811 ORTHO05D004743 5.6e-20 101.7 73 64.4
GSVIVG01018801001 Vitis vinifera HOM05D000811 ORTHO05D004743 5.6e-20 101.7 75 64.0
Sopen02g013220 Solanum pennellii HOM05D000811 ORTHO05D004743 7.3e-20 101.3 86 54.7
Oeu060412.1 Olea europaea HOM05D000811 ORTHO05D004743 9.5e-20 100.9 75 61.3
arahy.Tifrunner.gnm1.ann1.9YI44J Arachis hypogaea HOM05D007334 ORTHO05D004743 1.2e-19 100.5 73 65.8
Carub.0003s3219 Capsella rubella HOM05D000811 ORTHO05D004743 1.2e-19 100.5 73 64.4
C03p58940 Brassica napus HOM05D000811 ORTHO05D004743 1.6e-19 100.1 73 64.4
BolC3t18151H Brassica oleracea HOM05D000811 ORTHO05D004743 1.6e-19 100.1 73 64.4
SMO146G0274 Selaginella moellendorffii HOM05D000811 ORTHO05D004743 8.0e-19 97.8 73 63.0
MSTRG.2701 Avicennia marina HOM05D000811 ORTHO05D004743 1.0e-18 97.4 77 61.0
Actinidia22989 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.4e-18 97.1 70 62.9
Migut.H01149 Erythranthe guttata HOM05D000811 ORTHO05D004743 3.1e-18 95.9 75 61.3
SEGI_07022 Sequoiadendron giganteum HOM05D000811 ORTHO05D004743 3.1e-18 95.9 75 61.3
HPP92_002102 Vanilla planifolia HOM05D000811 ORTHO05D004743 4.0e-18 95.5 76 59.2
Pp3c20_23120 Physcomitrium patens HOM05D000811 ORTHO05D004743 6.8e-18 94.7 74 62.2
unitig_0.g45 Utricularia gibba HOM05D000628 ORTHO05D001121 6.8e-18 94.7 72 62.5
Zm00001eb419950 Zea mays HOM05D000811 ORTHO05D004743 1.5e-17 93.6 74 59.5
Os04g0118500 Oryza sativa ssp. japonica HOM05D000811 ORTHO05D004743 2.0e-17 93.2 75 58.7
SalBow3G3608 Salvia bowleyana HOM05D000811 ORTHO05D004743 2.6e-17 92.8 75 58.7
Nitab4.5_0010885g0050 Nicotiana tabacum HOM05D000811 ORTHO05D004743 3.4e-17 92.4 77 55.8
AagrBONN_evm.TU.Sc2ySwM_228.1572 Anthoceros agrestis HOM05D000811 ORTHO05D004743 7.5e-17 91.3 75 57.3
Pp3c10_25090 Physcomitrium patens HOM05D000811 ORTHO05D004743 1.7e-16 90.1 75 57.3
unitig_699.g19711 Utricularia gibba HOM05D000811 ORTHO05D004743 1.7e-16 90.1 75 56.0
Atru.chr3.785 Acer truncatum HOM05D000811 ORTHO05D004743 2.9e-16 89.4 62 66.1
Zm00001eb067280 Zea mays HOM05D000811 ORTHO05D004743 4.9e-16 88.6 74 56.8
PSO210G3301 Papaver somniferum HOM05D000811 ORTHO05D004743 8.3e-16 87.8 74 56.8
arahy.Tifrunner.gnm1.ann1.6S1J49 Arachis hypogaea HOM05D004782 ORTHO05D005498 4.1e-15 85.5 73 54.8
MCO04G419 Micromonas commoda HOM05D000811 ORTHO05D004743 2.0e-14 83.2 73 56.2
CBR_g552 Chara braunii HOM05D000811 ORTHO05D004743 7.8e-14 81.3 75 53.3
Ah.02g124500 Amaranthus hybridus HOM05D000811 ORTHO05D004743 2.3e-13 79.7 57 61.4
PRCOL_00002510 Prasinoderma coloniale HOM05D009714 ORTHO05D004743 3.7e-08 62.4 96 40.6
PSO170G2420 Papaver somniferum HOM05D000811 ORTHO05D004743 4.9e-08 62.0 50 58.0
Haze_26720 Corylus avellana HOM05D000811 ORTHO05D004743 8.3e-08 61.2 73 45.2
Actinidia00122 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.4e-07 60.5 69 46.4
Actinidia20649 Actinidia chinensis HOM05D000811 ORTHO05D004743 1.9e-07 60.1 44 61.4
arahy.Tifrunner.gnm1.ann1.0S2HJN Arachis hypogaea HOM05D007334 ORTHO05D004743 1.9e-07 60.1 72 45.8
Cre16.g671900 Chlamydomonas reinhardtii HOM05D000811 ORTHO05D004743 5.4e-07 58.5 73 43.8
Nitab4.5_0002096g0060 Nicotiana tabacum HOM05D000811 ORTHO05D004743 3.5e-06 55.8 30 83.3


User provided reference genes

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