Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 6.2e-231 803.9 445 100.0
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 5.4e-142 508.4 364 70.9
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 5.2e-137 491.9 395 67.3
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 1.5e-131 473.8 365 67.7
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.2e-130 470.7 401 63.3
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 2.2e-127 459.9 364 66.8
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 6.0e-125 451.8 393 60.8
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 7.8e-125 451.4 366 66.1
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 1.1e-121 441.0 394 59.6
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 4.0e-121 439.1 393 59.5
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 5.8e-120 435.3 393 60.1
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 7.6e-120 434.9 360 63.3
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.3e-119 434.1 394 58.6
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 3.2e-118 429.5 392 60.7
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 5.4e-118 428.7 394 57.9
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 9.2e-118 427.9 396 59.8
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.6e-117 427.2 396 59.6
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 2.7e-117 426.4 397 58.2
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.7e-117 426.4 396 59.6
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 3.5e-117 426.0 397 57.7
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 6.0e-117 425.2 397 57.9
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 7.8e-117 424.9 392 58.4
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.0e-116 424.5 398 59.3
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 2.3e-116 423.3 396 58.1
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.9e-116 422.5 394 57.9
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 1.9e-115 420.2 363 60.3
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.5e-115 419.9 392 58.7
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 7.3e-115 418.3 366 59.6
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 9.6e-115 417.9 398 58.3
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 9.6e-115 417.9 402 59.0
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 2.1e-114 416.8 395 57.7
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 4.8e-114 415.6 367 60.2
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 6.2e-114 415.2 392 58.7
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 8.1e-114 414.8 392 57.7
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.1e-113 414.5 378 57.7
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.8e-113 413.7 392 56.9
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 5.3e-113 412.1 392 56.6
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 6.9e-113 411.8 393 57.3
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 9.0e-113 411.4 393 57.0
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 9.0e-113 411.4 393 58.3
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 5.8e-112 408.7 392 55.1
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.3e-111 407.5 394 55.1
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 1.7e-111 407.1 396 54.5
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 4.9e-111 405.6 392 55.9
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 5.4e-110 402.1 394 54.3
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 9.3e-110 401.4 394 54.3
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 2.1e-109 400.2 397 56.4
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 3.5e-109 399.4 395 57.0
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 3.5e-109 399.4 392 56.4
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 6.0e-109 398.7 395 57.0
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 1.3e-108 397.5 418 51.4
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 1.7e-108 397.1 370 58.1
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 2.3e-108 396.7 394 53.8
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 3.0e-108 396.4 401 56.9
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 8.7e-108 394.8 394 55.3
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 8.7e-108 394.8 394 53.6
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.1e-107 394.4 394 56.1
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 1.5e-107 394.0 423 53.4
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 1.5e-107 394.0 402 53.5
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.9e-107 393.7 393 53.4
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.5e-107 393.3 402 56.2
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 3.3e-107 392.9 365 56.4
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 4.3e-107 392.5 392 56.9
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.6e-106 390.6 397 52.9
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.6e-106 389.4 370 58.1
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 3.1e-105 386.3 393 54.2
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 5.3e-105 385.6 411 53.5
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.0e-104 383.6 392 54.6
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 7.1e-102 375.2 398 55.0
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.2e-101 374.4 392 53.6
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.6e-101 374.0 368 55.2
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 3.5e-101 372.9 394 54.1
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 3.9e-100 369.4 394 53.0
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 5.1e-100 369.0 395 53.7
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-99 367.5 336 57.7
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 2.5e-99 366.7 379 54.6
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.3e-98 364.4 395 52.9
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 2.1e-98 363.6 393 50.9
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 6.2e-98 362.1 399 52.1
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 2.4e-97 360.1 374 55.1
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 4.0e-97 359.4 347 57.1
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 4.0e-97 359.4 398 51.8
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 4.5e-96 355.9 420 48.8
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.0e-95 354.8 311 60.8
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 9.3e-94 348.2 300 60.7
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 9.3e-94 348.2 443 45.8
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 4.6e-93 345.9 354 51.1
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.3e-92 344.4 351 53.3
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 3.9e-92 342.8 361 54.3
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.9e-92 342.8 268 65.7
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-91 340.9 307 59.0
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-91 340.1 309 58.6
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.3e-91 339.7 268 65.3
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.3e-91 339.7 268 65.3
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.3e-91 339.7 268 65.3
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 7.4e-91 338.6 336 57.4
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 5.0e-87 325.9 315 55.9
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 2.5e-83 313.5 398 45.2
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 2.5e-83 313.5 325 51.7
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.3e-79 301.2 449 42.5
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 7.2e-78 295.4 424 42.9
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 9.1e-65 251.9 174 72.4
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 1.1e-59 235.0 298 47.7
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 1.1e-59 235.0 286 49.3
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 4.2e-54 216.5 164 65.2
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.6e-53 214.5 177 62.7
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.3e-47 194.9 252 46.4
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 7.5e-43 179.1 579 27.6
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.8e-41 174.5 132 72.0
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.1e-38 165.2 202 50.0
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 7.5e-35 152.5 173 48.6
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.9e-26 124.0 130 59.2
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 6.4e-26 122.9 84 67.9
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 7.5e-19 99.4 93 61.3
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 6.2e-13 79.7 47 80.9
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.6e-11 72.8 59 69.5
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.6e-11 72.8 59 69.5
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.6e-11 72.8 59 69.5
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 1.7e-07 61.6 56 58.9


User provided reference genes

Program Settings