Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.6e-225 785.0 387 100.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 3.2e-159 565.5 384 74.0
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 4.0e-149 531.9 379 68.6
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 8.8e-149 530.8 379 68.9
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 9.7e-148 527.3 383 68.7
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 3.5e-145 518.8 379 67.8
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 4.2e-143 511.9 385 66.2
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.2e-142 510.4 383 65.8
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 4.7e-142 508.4 385 66.0
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 2.3e-141 506.1 378 69.3
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.0e-141 505.8 379 66.5
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 6.8e-141 504.6 382 66.2
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 3.4e-140 502.3 385 65.5
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 7.5e-140 501.1 379 66.8
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 2.2e-139 499.6 388 66.0
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.2e-137 493.8 384 64.8
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.3e-136 490.3 379 66.5
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 2.3e-136 489.6 375 65.3
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.1e-135 487.3 375 64.8
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.9e-135 486.5 375 65.9
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.6e-134 483.4 351 68.1
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 2.1e-134 483.0 381 63.3
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 6.8e-133 478.0 375 64.0
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 1.5e-132 476.9 384 60.9
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 2.6e-132 476.1 375 63.2
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 2.6e-132 476.1 397 61.5
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.4e-132 475.7 375 64.0
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.7e-131 473.4 375 63.5
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.2e-131 473.0 377 60.2
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 8.3e-131 471.1 380 62.6
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.1e-130 470.7 377 61.5
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 1.4e-130 470.3 384 61.5
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.4e-130 470.3 375 63.2
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.1e-130 469.2 378 61.4
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 5.4e-130 468.4 374 62.8
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.2e-129 467.2 375 63.2
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 1.6e-129 466.8 379 60.2
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.6e-129 466.8 375 62.9
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.0e-129 466.5 380 61.6
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 1.0e-128 464.2 386 61.9
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.0e-128 464.2 377 61.8
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.7e-128 463.4 383 59.3
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.3e-128 463.0 378 60.6
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.3e-128 463.0 384 59.4
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 2.3e-128 463.0 379 60.2
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 2.3e-128 463.0 375 63.2
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 2.9e-128 462.6 379 59.6
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 3.8e-128 462.2 379 59.4
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 8.6e-128 461.1 385 61.3
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 9.5e-127 457.6 378 60.3
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.2e-126 457.2 375 60.3
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 2.8e-126 456.1 375 62.7
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.6e-126 455.7 379 60.9
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 4.7e-126 455.3 375 60.0
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 2.0e-124 449.9 379 59.4
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 2.9e-123 446.0 381 60.1
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 4.9e-123 445.3 379 59.4
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 8.3e-123 444.5 381 60.4
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 8.3e-123 444.5 384 59.4
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.4e-122 443.7 381 58.3
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 3.2e-122 442.6 376 59.6
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 7.0e-122 441.4 380 57.6
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 7.0e-122 441.4 380 59.2
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.0e-120 437.6 375 59.2
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 3.9e-120 435.6 382 58.4
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 5.0e-120 435.3 382 57.9
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 6.6e-120 434.9 381 58.5
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 8.6e-120 434.5 381 58.5
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 2.1e-118 429.9 382 57.9
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 2.1e-118 429.9 382 57.6
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 2.1e-118 429.9 382 57.9
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 2.1e-118 429.9 378 57.7
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.6e-118 429.1 382 56.5
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 8.0e-118 427.9 382 58.1
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.3e-115 420.6 280 71.8
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 1.3e-115 420.6 282 72.0
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 1.7e-115 420.2 381 56.7
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 2.4e-114 416.4 361 58.4
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 4.1e-114 415.6 404 55.2
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.0e-114 414.8 373 59.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.7e-113 412.9 389 55.8
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 5.1e-112 408.7 433 49.2
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.1e-105 386.7 316 61.4
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 4.6e-105 385.6 377 52.8
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 6.2e-102 375.2 391 54.2
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 6.2e-102 375.2 391 54.2
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.1e-101 372.9 280 64.6
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.9e-98 363.6 377 52.5
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 2.4e-98 363.2 398 51.5
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 4.2e-98 362.5 401 51.1
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.7e-96 357.1 316 56.0
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 1.1e-95 354.4 242 68.2
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.3e-91 340.9 290 60.0
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 2.9e-91 339.7 276 60.1
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.5e-79 300.8 219 65.8
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 4.2e-74 282.7 312 45.8
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 7.1e-74 282.0 219 62.6
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 3.9e-72 276.2 325 46.5
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.3e-67 261.2 212 71.2
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 9.3e-66 255.0 381 39.9
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 6.0e-65 252.3 355 42.8
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.5e-63 246.9 197 64.5
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 7.2e-50 202.2 305 39.7
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 1.4e-42 177.9 215 44.7
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 4.8e-38 162.9 158 53.8
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.1e-37 160.2 158 51.9
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 6.1e-33 146.0 91 70.3
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 8.0e-33 145.6 208 42.3
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.0e-32 145.2 188 43.6
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 2.3e-32 144.1 144 45.8
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.3e-30 138.3 343 30.0
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.0e-24 118.6 103 64.1
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 5.0e-19 99.8 112 46.4
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 5.5e-18 96.3 54 79.6
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 7.2e-18 95.9 102 52.9
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 1.6e-17 94.7 70 61.4
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 3.0e-16 90.5 68 60.3
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 5.7e-15 86.3 119 44.5
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 1.4e-13 81.6 65 58.5
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 7.0e-13 79.3 268 25.4
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.3e-11 74.3 67 50.7
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 3.9e-11 73.6 168 29.8
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 7.5e-07 59.3 180 25.0


User provided reference genes

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