Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.5e-186 655.2 317 100.0
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 1.4e-72 277.3 254 60.6
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 7.1e-72 275.0 262 58.4
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 3.5e-71 272.7 255 60.8
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 4.6e-71 272.3 261 58.6
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 2.3e-70 270.0 259 59.1
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 1.1e-69 267.7 258 58.1
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 2.5e-69 266.5 255 58.4
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 2.5e-69 266.5 254 58.3
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 4.3e-69 265.8 253 57.7
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 7.4e-69 265.0 201 66.7
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 1.3e-68 264.2 257 56.8
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 1.1e-67 261.2 255 58.4
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 1.4e-67 260.8 260 56.5
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.8e-67 260.4 260 58.5
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 1.8e-67 260.4 255 58.4
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 5.3e-67 258.8 213 62.4
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 2.0e-66 256.9 256 55.5
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 2.6e-66 256.5 238 58.8
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 2.6e-66 256.5 254 58.3
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 1.3e-65 254.2 253 56.9
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 2.2e-65 253.4 258 54.7
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 3.8e-65 252.7 257 55.6
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 6.5e-65 251.9 254 53.9
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 6.5e-65 251.9 200 65.0
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 8.5e-65 251.5 260 52.7
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.1e-64 251.1 253 56.5
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 1.1e-64 251.1 229 58.1
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 1.4e-64 250.8 212 61.3
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.9e-64 250.4 216 60.6
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.9e-64 250.4 216 60.6
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 2.5e-64 250.0 243 57.6
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 3.2e-64 249.6 220 60.0
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 4.2e-64 249.2 238 58.8
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 5.5e-64 248.8 247 57.9
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 5.5e-64 248.8 257 52.9
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 5.5e-64 248.8 250 54.4
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 5.5e-64 248.8 176 69.9
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 9.3e-64 248.1 212 60.8
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 9.3e-64 248.1 210 61.0
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 1.2e-63 247.7 250 55.6
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.2e-63 247.7 180 67.8
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.2e-63 247.7 180 67.8
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 2.1e-63 246.9 256 57.0
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.1e-63 246.9 212 60.8
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 2.1e-63 246.9 257 52.9
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 2.7e-63 246.5 176 67.6
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 3.6e-63 246.1 256 54.7
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 6.1e-63 245.4 226 58.8
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 7.9e-63 245.0 207 63.3
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 7.9e-63 245.0 174 68.4
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 7.9e-63 245.0 241 55.6
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 1.0e-62 244.6 217 57.1
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 1.3e-62 244.2 209 60.8
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.8e-62 243.8 228 57.9
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 1.8e-62 243.8 252 54.4
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 3.0e-62 243.0 174 66.7
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 5.1e-62 242.3 228 59.2
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 5.1e-62 242.3 256 54.7
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 1.1e-61 241.1 176 66.5
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 1.1e-61 241.1 224 55.8
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.1e-61 241.1 199 61.8
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 1.1e-61 241.1 193 63.7
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 1.9e-61 240.4 177 67.8
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 1.9e-61 240.4 177 67.8
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 1.9e-61 240.4 243 53.5
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 2.5e-61 240.0 201 61.2
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 3.3e-61 239.6 177 67.2
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 4.3e-61 239.2 252 54.4
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 5.7e-61 238.8 177 67.2
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 5.7e-61 238.8 177 67.2
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 5.7e-61 238.8 257 52.5
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 3.1e-59 233.0 207 58.9
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 4.1e-59 232.6 233 57.1
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 1.2e-58 231.1 247 55.5
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 2.0e-58 230.3 187 61.5
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 7.7e-58 228.4 288 46.5
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 3.8e-57 226.1 176 64.2
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 1.1e-56 224.6 202 55.4
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 2.5e-56 223.4 167 65.3
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 2.1e-55 220.3 168 64.3
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.1e-53 214.5 161 64.6
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 5.3e-51 205.7 193 58.5
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 1.2e-50 204.5 163 61.3
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 4.5e-50 202.6 332 41.3
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 1.9e-48 197.2 220 51.4
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 2.5e-48 196.8 253 45.8
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.6e-47 194.1 222 51.8
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 3.6e-47 193.0 120 72.5
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 4.7e-47 192.6 171 55.6
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 5.2e-46 189.1 214 50.9
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 5.7e-45 185.7 105 81.9
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 3.1e-43 179.9 184 52.2
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 1.3e-41 174.5 230 45.2
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 2.9e-41 173.3 182 55.5
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 3.8e-41 172.9 159 55.3
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 3.8e-41 172.9 103 78.6
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 4.2e-40 169.5 157 56.1
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 1.4e-38 164.5 124 63.7
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 3.0e-38 163.3 243 44.4
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 5.7e-37 159.1 188 47.3
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 8.2e-36 155.2 88 80.7
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 1.1e-35 154.8 101 72.3
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 1.1e-35 154.8 101 72.3
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 5.3e-35 152.5 157 52.9
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.2e-30 136.0 84 76.2
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 4.4e-29 132.9 85 70.6
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 7.7e-26 122.1 159 45.3
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 1.5e-24 117.9 199 38.2
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 4.2e-24 116.3 100 61.0
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.8e-23 113.6 178 43.3
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 8.0e-23 112.1 92 62.0
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 6.8e-22 109.0 138 45.7
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 2.4e-19 100.5 158 40.5
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.2e-18 98.2 67 76.1
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 5.0e-17 92.8 82 57.3
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 8.6e-17 92.0 81 58.0
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 2.4e-11 73.9 83 54.2
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 4.7e-07 59.7 105 42.9


User provided reference genes

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