Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 4.6e-194 681.0 338 100.0
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.5e-165 586.3 334 87.1
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 2.5e-163 578.9 338 83.1
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 4.2e-163 578.2 340 84.1
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.0e-161 573.5 333 85.3
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 4.8e-159 564.7 323 86.7
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 6.3e-159 564.3 332 83.1
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 6.9e-158 560.8 332 83.1
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.7e-156 556.2 327 84.1
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 2.9e-156 555.4 337 82.2
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 8.5e-156 553.9 333 83.8
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 1.1e-155 553.5 332 81.6
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.4e-155 553.1 332 81.9
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 7.2e-155 550.8 322 84.5
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 9.4e-155 550.4 332 81.3
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 9.4e-155 550.4 332 81.3
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.1e-154 549.3 324 83.0
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 2.7e-154 548.9 340 81.2
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.7e-154 548.1 327 82.3
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 6.1e-154 547.7 322 84.8
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.4e-153 546.6 326 84.0
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.4e-153 546.6 332 80.7
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 1.4e-153 546.6 324 83.6
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.8e-153 546.2 322 84.5
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.8e-153 546.2 332 82.2
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.3e-153 545.8 324 83.6
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.6e-152 542.3 324 82.7
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 4.4e-152 541.6 321 82.6
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 4.4e-152 541.6 325 80.9
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 3.7e-151 538.5 331 79.8
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 1.1e-150 537.0 324 81.5
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.6e-149 533.1 327 79.8
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.6e-149 532.3 329 78.1
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 2.2e-148 529.3 332 79.2
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.9e-148 528.9 335 78.2
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.8e-148 528.5 327 79.8
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 6.5e-148 527.7 331 78.9
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 8.5e-148 527.3 329 78.4
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 1.1e-147 526.9 327 80.1
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.9e-147 526.2 337 78.9
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 5.5e-147 524.6 336 77.7
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 7.2e-147 524.2 322 80.1
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.2e-146 523.5 323 79.9
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 1.2e-146 523.5 331 77.6
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.2e-146 523.5 331 79.2
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 2.7e-146 522.3 327 78.3
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 3.6e-146 521.9 332 78.3
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.6e-146 521.9 323 79.3
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 3.0e-145 518.8 335 77.9
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 4.0e-145 518.5 335 77.3
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 6.7e-145 517.7 330 78.2
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 1.5e-144 516.5 339 75.8
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 2.0e-144 516.2 304 84.2
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 2.6e-144 515.8 327 78.6
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 2.6e-144 515.8 303 84.2
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.6e-144 515.8 327 78.3
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 3.3e-144 515.4 325 78.2
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 9.7e-144 513.8 330 77.6
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 9.7e-144 513.8 325 78.5
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 1.7e-143 513.1 304 83.6
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.7e-143 511.9 327 76.8
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 3.7e-143 511.9 323 78.0
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 6.3e-143 511.1 332 76.8
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 8.2e-143 510.8 332 74.4
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 1.4e-142 510.0 331 77.0
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 1.8e-142 509.6 350 72.9
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 1.8e-142 509.6 350 73.4
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.8e-142 509.6 324 77.8
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 5.3e-142 508.1 326 77.6
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 1.2e-141 506.9 323 77.4
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 2.0e-141 506.1 330 76.7
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 2.7e-141 505.8 322 77.3
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.7e-141 505.8 324 76.9
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 3.5e-141 505.4 324 75.3
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 4.5e-141 505.0 326 76.7
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.9e-141 504.6 331 75.2
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 2.2e-140 502.7 334 74.9
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.2e-140 502.7 326 77.3
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 5.0e-140 501.5 325 76.3
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 6.5e-140 501.1 323 76.2
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 2.5e-139 499.2 326 75.2
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 7.2e-139 497.7 310 79.4
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 4.7e-138 495.0 325 73.5
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 1.0e-137 493.8 329 75.1
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 2.3e-137 492.7 329 73.6
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 3.0e-137 492.3 327 72.2
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 6.8e-137 491.1 339 70.8
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.2e-136 490.3 326 73.0
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.5e-136 490.0 380 67.4
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 5.7e-136 488.0 360 70.6
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 9.8e-136 487.3 332 73.5
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 1.3e-135 486.9 318 74.2
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.7e-135 486.5 325 75.1
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 2.8e-135 485.7 318 73.9
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 1.4e-134 483.4 319 73.4
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 5.4e-134 481.5 308 77.9
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 5.4e-134 481.5 336 72.6
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 7.0e-134 481.1 309 77.7
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 7.0e-134 481.1 339 72.9
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.2e-133 480.3 318 73.3
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 2.0e-133 479.6 325 71.4
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 2.0e-133 479.6 318 72.6
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 3.5e-133 478.8 324 71.0
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 4.5e-133 478.4 325 71.4
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 4.5e-133 478.4 308 76.3
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 4.5e-133 478.4 324 73.5
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.0e-132 477.2 325 73.2
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 1.0e-132 477.2 318 72.6
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 2.9e-132 475.7 318 72.6
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 6.5e-132 474.6 325 70.8
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 8.5e-132 474.2 325 70.8
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 8.5e-132 474.2 306 77.1
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.5e-131 473.4 322 73.3
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 2.5e-131 472.6 357 66.9
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 3.2e-131 472.2 327 72.2
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 6.1e-130 468.0 353 67.1
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.0e-129 467.2 265 86.0
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 8.8e-129 464.2 322 73.3
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.5e-128 463.4 321 72.6
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.8e-127 459.1 320 73.8
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 4.9e-127 458.4 307 74.6
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 6.3e-127 458.0 331 68.6
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.4e-126 456.1 318 69.5
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 5.9e-125 451.4 323 70.3
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 2.8e-122 442.6 526 48.9
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 1.3e-119 433.7 304 69.7
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 5.4e-118 428.3 325 68.0
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 1.6e-117 426.8 267 79.8
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 2.5e-115 419.5 251 83.7
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 1.3e-111 407.1 263 78.7
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 2.1e-106 389.8 319 63.9
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 1.7e-100 370.2 232 78.4
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 4.0e-97 359.0 324 56.8
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 4.0e-97 359.0 317 56.8
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.2e-96 357.5 282 66.7
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.7e-93 346.3 202 83.2
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 2.5e-91 339.7 207 77.8
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 4.0e-89 332.4 207 78.3
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 2.0e-88 330.1 346 54.6
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 9.9e-88 327.8 290 57.6
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 2.9e-87 326.2 203 80.3
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 9.9e-80 301.2 215 71.6
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 2.5e-75 286.6 163 85.9
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.9e-71 273.1 164 83.5
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.5e-67 260.8 375 41.3
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 7.6e-64 248.4 213 62.0
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 4.9e-63 245.7 171 71.3
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 5.5e-62 242.3 170 68.8
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 5.5e-62 242.3 168 73.2
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.8e-60 237.3 161 71.4
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.3e-52 211.1 251 47.8
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 3.7e-50 203.0 201 55.7
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 1.7e-47 194.1 339 39.5
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 2.5e-46 190.3 126 73.8
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 9.7e-43 178.3 112 78.6
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 3.5e-32 143.3 143 53.8
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.5e-27 127.9 71 90.1
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 5.7e-27 125.9 258 34.9
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 3.7e-26 123.2 252 33.7
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 1.4e-25 121.3 339 32.2
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.0e-23 112.8 204 37.7
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.5e-22 110.5 64 81.2
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.4e-20 104.8 63 77.8
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.4e-19 100.1 57 82.5
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 4.4e-19 99.8 88 54.5
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.8e-18 97.1 56 83.9
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 5.4e-09 66.2 74 45.9
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.7e-08 63.9 49 63.3
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 6.6e-07 59.3 35 77.1


User provided reference genes

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