Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 7.9e-238 826.6 394 100.0
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.6e-145 520.0 344 71.8
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 1.1e-138 497.3 344 67.4
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 3.9e-136 488.8 345 64.9
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 5.1e-136 488.4 344 66.6
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 1.5e-135 486.9 345 67.0
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 5.6e-135 485.0 344 66.3
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.6e-134 483.4 344 66.3
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 1.2e-132 477.2 346 66.2
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 5.8e-132 474.9 353 63.2
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 2.2e-131 473.0 351 63.0
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 8.4e-131 471.1 345 64.1
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 1.9e-130 469.9 349 63.9
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 3.5e-129 465.7 348 62.4
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 4.6e-129 465.3 344 64.2
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.0e-128 464.2 347 62.0
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 1.0e-128 464.2 343 63.6
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 2.3e-128 463.0 345 62.3
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 2.3e-128 463.0 348 62.1
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 3.0e-128 462.6 344 63.4
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 3.0e-128 462.6 358 62.3
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.1e-127 460.7 358 62.0
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.9e-127 459.9 347 61.7
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.9e-127 459.9 344 62.8
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 9.7e-127 457.6 345 62.9
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 9.7e-127 457.6 374 58.8
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 9.7e-127 457.6 345 62.3
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 4.8e-126 455.3 346 61.8
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 2.4e-125 453.0 346 60.4
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 1.2e-124 450.7 345 60.9
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 1.5e-124 450.3 349 60.2
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 2.6e-124 449.5 341 62.2
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 1.9e-122 443.4 411 55.2
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 5.5e-122 441.8 349 59.3
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 9.3e-122 441.0 344 60.5
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 1.6e-121 440.3 358 58.7
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 2.1e-121 439.9 350 59.7
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 2.7e-121 439.5 345 60.3
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 3.6e-121 439.1 348 60.3
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 4.6e-121 438.7 350 58.0
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 6.1e-121 438.3 345 60.3
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 2.3e-120 436.4 353 60.3
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 3.0e-120 436.0 348 59.8
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 5.1e-120 435.3 346 59.2
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.1e-119 434.1 345 59.4
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 1.5e-119 433.7 349 59.9
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 1.9e-119 433.3 344 59.9
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 7.4e-119 431.4 346 59.0
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 1.7e-118 430.3 345 58.0
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 1.7e-118 430.3 345 58.0
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 3.7e-118 429.1 345 58.0
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 3.7e-118 429.1 345 58.0
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 3.7e-118 429.1 345 58.0
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 8.2e-118 427.9 351 57.5
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.4e-117 427.2 344 59.6
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.1e-117 426.0 365 57.3
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 9.1e-117 424.5 345 57.4
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 2.0e-116 423.3 383 54.3
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 4.5e-116 422.2 343 58.3
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 5.9e-116 421.8 345 60.0
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 5.0e-115 418.7 353 57.2
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 1.2e-113 414.1 345 57.1
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 1.0e-112 411.0 345 57.4
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 3.3e-111 406.0 377 52.8
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.7e-110 403.7 346 54.6
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 8.2e-110 401.4 350 55.4
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 9.1e-109 397.9 344 54.4
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 1.2e-108 397.5 362 53.9
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.2e-108 397.5 349 53.6
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.5e-108 397.1 342 54.4
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.5e-108 397.1 344 54.4
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.5e-108 397.1 345 55.7
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 8.5e-107 391.3 345 54.5
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.1e-105 386.7 337 54.0
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 8.0e-105 384.8 355 53.5
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 5.2e-104 382.1 356 53.1
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 2.6e-103 379.8 360 52.2
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 5.9e-100 368.6 339 52.8
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.0e-96 357.8 344 51.2
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 4.0e-96 355.9 354 46.6
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 1.5e-95 354.0 359 49.9
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 6.3e-94 348.6 268 61.6
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.3e-91 340.9 344 49.4
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 5.0e-91 339.0 436 42.2
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 4.2e-90 335.9 370 45.1
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.7e-86 323.9 307 54.4
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 1.1e-85 321.2 359 44.6
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 3.3e-82 309.7 345 47.0
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 3.3e-82 309.7 345 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 8.9e-80 301.6 354 44.9
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 1.3e-78 297.7 200 68.5
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.5e-76 289.7 372 39.5
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.9e-74 283.9 267 51.7
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 5.6e-74 282.3 221 58.4
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 8.9e-56 221.9 159 63.5
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.6e-49 201.1 179 53.6
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 8.7e-43 178.7 152 59.9
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 3.3e-42 176.8 152 59.2
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 7.3e-42 175.6 123 66.7
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 9.6e-42 175.3 152 58.6
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 1.2e-41 174.9 151 58.9
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.4e-40 171.4 106 72.6
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-37 161.4 133 61.7
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.6e-36 157.9 122 59.8
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 3.5e-36 156.8 105 66.7
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 6.6e-35 152.5 108 64.8
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.8e-32 144.4 105 61.0
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 4.5e-31 139.8 109 56.0
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 1.4e-29 134.8 89 67.4
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 1.6e-28 131.3 88 68.2
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 4.6e-28 129.8 75 76.0
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 7.9e-28 129.0 75 73.3
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 3.9e-27 126.7 119 55.5
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 9.6e-26 122.1 92 62.0
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 4.8e-25 119.8 83 60.2
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 7.6e-23 112.5 122 45.9
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 3.8e-22 110.2 62 74.2
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 6.4e-22 109.4 75 65.3
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 1.8e-19 101.3 59 69.5
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.9e-18 97.8 61 68.9
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.8e-17 94.0 65 61.5
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 8.2e-17 92.4 81 54.3
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 1.7e-14 84.7 52 69.2
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 3.5e-12 77.0 150 32.0
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 3.0e-11 73.9 42 76.2
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 1.5e-10 71.6 42 73.8
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 1.3e-09 68.6 41 78.0
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.8e-09 67.4 88 39.8
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 8.2e-09 65.9 42 66.7
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.4e-08 65.1 101 32.7
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.4e-08 64.3 44 68.2
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.4e-08 64.3 44 68.2


User provided reference genes

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