Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI02_g07510_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 3.7e-129 464.9 242 100.0
MBI13_g04211_MAGBIO Magnolia biondii HOM05D022599 ORTHO05D001297 1.0e-49 201.1 188 62.2
MBI04_g40088_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 1.3e-28 131.0 166 48.2
MBI01_g16636_MAGBIO Magnolia biondii HOM05D001437 ORTHO05D001297 1.0e-17 94.7 144 42.4
TAR624G0085 Trochodendron aralioides HOM05D001437 ORTHO05D001297 1.5e-16 90.9 148 37.8
TAR636G1076 Trochodendron aralioides HOM05D001437 ORTHO05D001297 2.7e-15 86.7 185 36.2
Medtr8g103750 Medicago truncatula HOM05D001437 ORTHO05D001297 1.0e-14 84.7 135 39.3
TAR383G0599 Trochodendron aralioides HOM05D001437 ORTHO05D001297 1.0e-14 84.7 176 35.8
Nn2g11804 Nelumbo nucifera HOM05D001437 ORTHO05D001297 1.4e-14 84.3 178 34.3
TAR636G2605 Trochodendron aralioides HOM05D001437 ORTHO05D001297 6.8e-14 82.0 185 35.1
GSVIVG01017129001 Vitis vinifera HOM05D001437 ORTHO05D001297 2.0e-13 80.5 72 56.9
Glyma.09G188300 Glycine max HOM05D001437 ORTHO05D001297 3.4e-13 79.7 62 58.1
Glyma.07G088500 Glycine max HOM05D001437 ORTHO05D001297 5.7e-13 79.0 177 32.2
Glyma.05G232200 Glycine max HOM05D001437 ORTHO05D001297 2.2e-12 77.0 148 34.5
TWI32G1313 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 3.7e-12 76.3 139 36.0
MBI12_g03593_MAGBIO Magnolia biondii HOM05D022599 ORTHO05D240830 6.3e-12 75.5 155 40.6
Dinv41584 Davidia involucrata HOM05D001437 ORTHO05D001297 1.1e-11 74.7 96 46.9
Psat7g014040 Pisum sativum HOM05D001437 ORTHO05D001297 1.8e-11 73.9 161 31.1
COL.COLO4_34887 Corchorus olitorius HOM05D001437 ORTHO05D001297 2.4e-11 73.6 135 37.0
Ca_25439_v3 Cicer arietinum L. HOM05D001437 ORTHO05D001297 3.1e-11 73.2 133 39.1
Nn8g39251 Nelumbo nucifera HOM05D001437 ORTHO05D001297 3.1e-11 73.2 99 43.4
Phvul.002G314400 Phaseolus vulgaris HOM05D001437 ORTHO05D001297 3.1e-11 73.2 178 32.0
Lalb_Chr05g0222691 Lupinus albus HOM05D001437 ORTHO05D001297 4.1e-11 72.8 98 45.9
Lalb_Chr14g0371371 Lupinus albus HOM05D001437 ORTHO05D001297 4.1e-11 72.8 62 56.5
PSO063G5179 Papaver somniferum HOM05D001437 ORTHO05D001297 4.1e-11 72.8 108 40.7
PSO782G3465 Papaver somniferum HOM05D001437 ORTHO05D001297 4.1e-11 72.8 65 53.8
CiPaw.08G016300 Carya illinoinensis HOM05D001437 ORTHO05D001297 9.2e-11 71.6 63 57.1
Hma1.2p1_0018F.1_g013230 Hydrangea macrophylla HOM05D001437 ORTHO05D001297 1.2e-10 71.2 63 55.6
Lj2g0023387 Lotus japonicus HOM05D001437 ORTHO05D001297 1.2e-10 71.2 63 52.4
TWI32G0814 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 1.6e-10 70.9 86 45.3
VMungo0251G3488 Vigna mungo HOM05D001437 ORTHO05D001297 1.6e-10 70.9 177 29.4
Haze_25691 Corylus avellana HOM05D001437 ORTHO05D001297 2.0e-10 70.5 85 48.2
Dinv30219 Davidia involucrata HOM05D001437 ORTHO05D001297 2.0e-10 70.5 64 56.2
FAN26G1169 Fragaria x ananassa HOM05D001437 ORTHO05D001297 2.0e-10 70.5 141 34.0
FAN26G1470 Fragaria x ananassa HOM05D001437 ORTHO05D001297 2.0e-10 70.5 141 34.0
Aqoxy7G01811 Aquilegia oxysepala HOM05D001437 ORTHO05D001297 2.7e-10 70.1 65 50.8
Dinv36609 Davidia involucrata HOM05D001437 ORTHO05D001297 2.7e-10 70.1 146 34.9
Cfa003281 Carpinus fangiana HOM05D001437 ORTHO05D001297 3.5e-10 69.7 84 46.4
Hma1.2p1_0175F.1_g077322 Hydrangea macrophylla HOM05D001437 ORTHO05D001297 3.5e-10 69.7 92 43.5
Rhsim02G0186900 Rhododendron simsii HOM05D001437 ORTHO05D001297 4.5e-10 69.3 67 53.7
TPR.G21675 Trifolium pratense HOM05D001437 ORTHO05D001297 4.5e-10 69.3 132 34.8
Duzib168G2108 Durio zibethinus HOM05D001437 ORTHO05D001297 5.9e-10 68.9 82 47.6
Duzib187G0293 Durio zibethinus HOM05D001437 ORTHO05D001297 7.7e-10 68.6 124 41.1
FvH4_1g05240 Fragaria vesca HOM05D001437 ORTHO05D001297 7.7e-10 68.6 141 33.3
FAN19G0712 Fragaria x ananassa HOM05D001437 ORTHO05D001297 7.7e-10 68.6 141 33.3
FAN23G2212 Fragaria x ananassa HOM05D001437 ORTHO05D001297 7.7e-10 68.6 141 33.3
Glyma.08G039600 Glycine max HOM05D001437 ORTHO05D001297 7.7e-10 68.6 146 32.9
Gohir.D05G023400 Gossypium hirsutum HOM05D001437 ORTHO05D001297 7.7e-10 68.6 76 50.0
Gorai.009G023500 Gossypium raimondii HOM05D001437 ORTHO05D001297 7.7e-10 68.6 76 50.0
PSO210G6127 Papaver somniferum HOM05D001437 ORTHO05D001297 7.7e-10 68.6 77 48.1
GSVIVG01015419001 Vitis vinifera HOM05D001437 ORTHO05D001297 7.7e-10 68.6 148 32.4
CSS0017855 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 1.0e-09 68.2 84 45.2
CSS0033969 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 1.0e-09 68.2 84 45.2
Duzib150G0759 Durio zibethinus HOM05D001437 ORTHO05D001297 1.0e-09 68.2 66 53.0
CiPaw.04G166600 Carya illinoinensis HOM05D001437 ORTHO05D001297 1.3e-09 67.8 84 46.4
CiPaw.07G217000 Carya illinoinensis HOM05D001437 ORTHO05D001297 1.3e-09 67.8 89 42.7
FAN28G1375 Fragaria x ananassa HOM05D001437 ORTHO05D001297 1.3e-09 67.8 141 33.3
PSO210G5730 Papaver somniferum HOM05D001437 ORTHO05D001297 1.3e-09 67.8 77 46.8
vmacro11110 Vaccinium macrocarpon HOM05D001437 ORTHO05D001297 1.3e-09 67.8 64 54.7
Cc06_g09450 Coffea canephora HOM05D001437 ORTHO05D001297 2.3e-09 67.0 90 38.9
QL02p085888 Quercus lobata HOM05D001437 ORTHO05D001297 2.3e-09 67.0 139 35.3
Thecc.09G113500 Theobroma cacao HOM05D001437 ORTHO05D001297 2.3e-09 67.0 141 34.0
Gohir.A05G021800 Gossypium hirsutum HOM05D001437 ORTHO05D001297 3.8e-09 66.2 92 45.7
Gorai.004G279500 Gossypium raimondii HOM05D001437 ORTHO05D001297 5.0e-09 65.9 55 60.0
MBI18_g46592_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D010534 5.0e-09 65.9 39 84.6
QL12p031169 Quercus lobata HOM05D001437 ORTHO05D001297 5.0e-09 65.9 82 41.5
TPR.G38992 Trifolium pratense HOM05D001437 ORTHO05D001297 5.0e-09 65.9 88 40.9
Eucgr.A01700 Eucalyptus grandis HOM05D001437 ORTHO05D001297 6.6e-09 65.5 54 57.4
Lj4g0011940 Lotus japonicus HOM05D001437 ORTHO05D001297 6.6e-09 65.5 85 44.7
CSS0032954 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 8.6e-09 65.1 85 48.2
Peaxi162Scf00546g00325 Petunia axillaris HOM05D001437 ORTHO05D001297 8.6e-09 65.1 59 54.2
Lalb_Chr09g0331141 Lupinus albus HOM05D001437 ORTHO05D001297 1.1e-08 64.7 145 31.7
MD15G1114500 Malus domestica HOM05D001437 ORTHO05D001297 1.1e-08 64.7 69 52.2
Ca_25517_v3 Cicer arietinum L. HOM05D001437 ORTHO05D001297 1.5e-08 64.3 101 37.6
Ciclev10007554m.g Citrus clementina HOM05D001437 ORTHO05D001297 1.5e-08 64.3 152 30.9
Gohir.A08G240700 Gossypium hirsutum HOM05D001437 ORTHO05D001297 1.5e-08 64.3 76 48.7
THA.LOC104808754 Tarenaya hassleriana HOM05D001437 ORTHO05D001297 1.5e-08 64.3 95 44.2
VMungo0251G3166 Vigna mungo HOM05D001437 ORTHO05D001297 1.5e-08 64.3 198 28.8
MD02G1063100 Malus domestica HOM05D001437 ORTHO05D001297 1.9e-08 63.9 146 33.6
Actinidia07417 Actinidia chinensis HOM05D001437 ORTHO05D001297 2.5e-08 63.5 97 41.2
CSS0034517 Camellia sinensis var. sinensis HOM05D001437 ORTHO05D001297 2.5e-08 63.5 63 50.8
Phvul.002G314500 Phaseolus vulgaris HOM05D001437 ORTHO05D001297 2.5e-08 63.5 176 27.8
RcHm_v2.0_Chr2g0090971 Rosa chinensis HOM05D001437 ORTHO05D001297 2.5e-08 63.5 146 32.2
vmacro20662 Vaccinium macrocarpon HOM05D001437 ORTHO05D001297 2.5e-08 63.5 115 40.9
Potri.006G246100 Populus trichocarpa HOM05D001437 ORTHO05D001297 4.3e-08 62.8 124 40.3
TWI34G1393 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 4.3e-08 62.8 123 37.4
Potri.018G076200 Populus trichocarpa HOM05D001437 ORTHO05D001297 5.6e-08 62.4 150 30.7
Cpa.g.sc23.124 Carica papaya HOM05D001437 ORTHO05D001297 1.2e-07 61.2 64 50.0
PGSC0003DMG400014483 Solanum tuberosum HOM05D001437 ORTHO05D001297 1.2e-07 61.2 104 38.5
Prupe.7G227900 Prunus persica HOM05D001437 ORTHO05D001297 1.6e-07 60.8 143 30.1
Sabra18G0064900 Salix brachista HOM05D001437 ORTHO05D001297 1.6e-07 60.8 144 31.9
Sopen08g021840 Solanum pennellii HOM05D001437 ORTHO05D001297 1.6e-07 60.8 92 40.2
Actinidia13292 Actinidia chinensis HOM05D001437 ORTHO05D001297 2.1e-07 60.5 77 44.2
Potri.018G035000 Populus trichocarpa HOM05D001437 ORTHO05D001297 2.1e-07 60.5 116 38.8
PGSC0003DMG400000322 Solanum tuberosum HOM05D001437 ORTHO05D001297 2.1e-07 60.5 57 52.6
vmacro06202 Vaccinium macrocarpon HOM05D001437 ORTHO05D001297 2.1e-07 60.5 123 35.8
arahy.Tifrunner.gnm1.ann1.73LV1S Arachis hypogaea HOM05D001437 ORTHO05D001297 2.8e-07 60.1 91 38.5
ClCG11G002590 Citrullus lanatus HOM05D001437 ORTHO05D001297 2.8e-07 60.1 84 41.7
COL.COLO4_24073 Corchorus olitorius HOM05D001437 ORTHO05D001297 2.8e-07 60.1 92 43.5
Manes.03G067000 Manihot esculenta HOM05D001437 ORTHO05D001297 2.8e-07 60.1 60 53.3
Solyc12g006990.2 Solanum lycopersicum HOM05D001437 ORTHO05D001297 2.8e-07 60.1 57 52.6
Sopen12g002950 Solanum pennellii HOM05D001437 ORTHO05D001297 2.8e-07 60.1 57 52.6
TWI63G1217 Tripterygium wilfordii HOM05D001437 ORTHO05D001297 3.6e-07 59.7 79 40.5
DCAR_001495 Daucus carota HOM05D001437 ORTHO05D001297 4.7e-07 59.3 66 40.9
Dinv30523 Davidia involucrata HOM05D001437 ORTHO05D001297 4.7e-07 59.3 106 37.7
Peaxi162Scf00560g00513 Petunia axillaris HOM05D001437 ORTHO05D001297 4.7e-07 59.3 65 44.6
Prupe.1G466000 Prunus persica HOM05D001437 ORTHO05D001297 4.7e-07 59.3 65 44.6
arahy.Tifrunner.gnm1.ann1.15P38C Arachis hypogaea HOM05D001437 ORTHO05D001297 6.1e-07 58.9 69 44.9
CAN.G679.10 Capsicum annuum HOM05D001437 ORTHO05D001297 6.1e-07 58.9 83 41.0
FAN15G0311 Fragaria x ananassa HOM05D001437 ORTHO05D001297 8.0e-07 58.5 62 46.8
Gohir.A06G060900 Gossypium hirsutum HOM05D001437 ORTHO05D001297 8.0e-07 58.5 100 38.0
Gorai.009G012100 Gossypium raimondii HOM05D001437 ORTHO05D001297 8.0e-07 58.5 77 48.1
Gorai.010G054100 Gossypium raimondii HOM05D001437 ORTHO05D001297 8.0e-07 58.5 81 45.7
Lj8A609T42 Lonicera japonica HOM05D001437 ORTHO05D001297 8.0e-07 58.5 76 40.8
MD08G1135500 Malus domestica HOM05D001437 ORTHO05D001297 8.0e-07 58.5 69 49.3
MELO3C004547.2 Cucumis melo HOM05D001437 ORTHO05D001297 1.0e-06 58.2 55 50.9
FAN27G0132 Fragaria x ananassa HOM05D001437 ORTHO05D001297 1.0e-06 58.2 62 46.8
Glyma.17G203600 Glycine max HOM05D001437 ORTHO05D001297 1.0e-06 58.2 66 45.5
Oeu027164.1 Olea europaea HOM05D001437 ORTHO05D001297 1.4e-06 57.8 94 38.3
Oeu045172.1 Olea europaea HOM05D001437 ORTHO05D001297 1.4e-06 57.8 89 37.1
Cfa013220 Carpinus fangiana HOM05D001437 ORTHO05D001297 1.8e-06 57.4 63 44.4
FAN24G0293 Fragaria x ananassa HOM05D001437 ORTHO05D001297 1.8e-06 57.4 63 44.4
RcHm_v2.0_Chr6g0312661 Rosa chinensis HOM05D001437 ORTHO05D001297 1.8e-06 57.4 62 45.2
Solyc08g067930.4 Solanum lycopersicum HOM05D001437 ORTHO05D001297 1.8e-06 57.4 104 36.5
FvH4_2g30220 Fragaria vesca HOM05D001437 ORTHO05D001297 2.3e-06 57.0 62 45.2
Sed0023292 Sechium edule HOM05D001437 ORTHO05D001297 2.3e-06 57.0 55 49.1
Gohir.A06G048300 Gossypium hirsutum HOM05D001437 ORTHO05D001297 3.0e-06 56.6 81 44.4
MD15G1188600 Malus domestica HOM05D001437 ORTHO05D001297 3.0e-06 56.6 146 32.2
Actinidia09409 Actinidia chinensis HOM05D001437 ORTHO05D001297 4.0e-06 56.2 128 33.6
Aa31LG8G11170 Aethionema arabicum HOM05D001437 ORTHO05D001297 4.0e-06 56.2 121 35.5
CANSAT56G1349 Cannabis sativa HOM05D001437 ORTHO05D001297 4.0e-06 56.2 203 27.6
Cc08_g08250 Coffea canephora HOM05D001437 ORTHO05D001297 4.0e-06 56.2 65 43.1
Rhsim03G0244400 Rhododendron simsii HOM05D001437 ORTHO05D001297 4.0e-06 56.2 123 35.0
Sed0000587 Sechium edule HOM05D001437 ORTHO05D001297 4.0e-06 56.2 92 38.0
CANSAT56G0530 Cannabis sativa HOM05D001437 ORTHO05D001297 6.8e-06 55.5 203 27.6
Sc23g0005810 Simmondsia chinensis HOM05D001437 ORTHO05D001297 8.9e-06 55.1 89 37.1


User provided reference genes

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