Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 9.5e-203 709.9 348 100.0
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.4e-132 476.9 336 67.6
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 9.7e-131 470.7 336 67.9
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 5.9e-128 461.5 337 65.0
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.9e-126 456.4 336 64.9
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 4.4e-123 445.3 336 62.8
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 4.4e-123 445.3 337 64.7
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 9.8e-123 444.1 336 64.6
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 9.1e-121 437.6 345 60.9
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 3.5e-120 435.6 337 62.6
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 2.9e-119 432.6 362 57.2
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.5e-118 430.3 336 63.4
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.2e-117 427.2 326 63.5
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.7e-117 426.0 335 60.9
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 1.0e-116 424.1 353 58.4
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 2.3e-116 422.9 338 61.2
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 6.8e-116 421.4 336 60.4
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 1.5e-115 420.2 335 59.7
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 3.4e-115 419.1 336 59.2
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 5.7e-115 418.3 335 58.5
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 5.7e-115 418.3 336 61.6
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 7.5e-115 417.9 317 61.8
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 7.5e-115 417.9 347 58.5
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 1.3e-114 417.2 336 61.0
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 2.2e-114 416.4 338 59.8
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 3.7e-114 415.6 335 58.5
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 4.9e-114 415.2 336 60.7
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 6.3e-114 414.8 335 58.5
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.4e-113 412.9 346 60.1
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 3.1e-113 412.5 329 59.3
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 5.4e-113 411.8 335 57.9
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 1.2e-112 410.6 338 56.2
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 1.2e-112 410.6 336 60.1
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 1.6e-112 410.2 338 57.7
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 1.6e-112 410.2 335 58.8
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 1.6e-112 410.2 346 60.1
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 2.7e-112 409.5 337 58.2
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 3.5e-112 409.1 336 57.4
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 4.5e-112 408.7 314 60.2
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 5.9e-112 408.3 306 66.3
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 5.9e-112 408.3 346 60.1
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.7e-111 406.8 336 56.5
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 5.0e-111 405.2 336 57.1
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 6.6e-111 404.8 310 62.6
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 6.6e-111 404.8 311 62.7
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.1e-110 404.1 337 59.6
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 1.6e-109 400.2 312 60.3
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 1.6e-109 400.2 336 59.5
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 8.0e-109 397.9 338 58.0
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.3e-108 396.4 336 56.2
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 3.0e-108 396.0 307 59.9
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.2e-107 394.0 336 56.5
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 1.2e-107 394.0 337 55.5
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 4.4e-107 392.1 336 55.7
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 5.7e-107 391.7 336 54.5
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 5.7e-107 391.7 336 55.1
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 7.5e-107 391.3 338 57.7
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 1.3e-106 390.6 314 59.2
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 2.4e-105 386.3 332 57.8
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 3.2e-105 386.0 338 55.3
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 4.1e-105 385.6 338 55.3
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 5.4e-105 385.2 336 54.5
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 7.0e-105 384.8 338 54.4
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 9.2e-105 384.4 346 57.8
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 1.6e-104 383.6 336 54.8
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 3.5e-104 382.5 346 57.2
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 4.6e-104 382.1 336 56.0
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 5.9e-104 381.7 337 58.2
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 1.3e-103 380.6 379 50.9
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 2.3e-103 379.8 336 53.0
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 5.6e-102 375.2 327 53.2
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 7.3e-102 374.8 327 53.2
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 9.5e-102 374.4 310 57.7
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 1.6e-101 373.6 323 57.6
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 1.4e-100 370.5 337 52.2
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 5.2e-100 368.6 332 56.9
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 6.8e-100 368.2 294 58.2
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 8.9e-100 367.9 353 51.6
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 3.4e-99 365.9 315 54.0
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 4.4e-99 365.5 315 54.0
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.5e-99 364.8 346 55.8
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 9.8e-99 364.4 297 55.6
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 9.8e-99 364.4 268 64.9
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.3e-98 364.0 311 56.3
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 2.9e-98 362.8 329 56.8
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 4.9e-98 362.1 248 68.5
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.1e-97 360.9 352 53.4
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 2.4e-97 359.8 307 55.4
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 2.4e-97 359.8 327 54.4
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 2.0e-96 356.7 341 52.2
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.5e-96 355.9 298 58.7
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 7.8e-96 354.8 339 52.5
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.7e-95 353.6 333 55.0
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 3.0e-95 352.8 336 49.7
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 6.6e-95 351.7 333 54.7
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 1.9e-94 350.1 339 52.5
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 1.9e-94 350.1 339 51.9
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 4.3e-94 349.0 336 52.7
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 9.5e-94 347.8 335 52.5
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 1.2e-93 347.4 327 52.9
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 1.6e-93 347.1 350 50.9
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 8.1e-93 344.7 339 51.9
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 3.1e-92 342.8 334 48.8
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 1.2e-91 340.9 267 60.7
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.2e-91 340.9 307 53.1
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 7.5e-91 338.2 335 51.6
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 3.7e-90 335.9 336 47.3
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 9.2e-89 331.3 336 50.3
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 1.6e-88 330.5 335 51.6
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 3.5e-88 329.3 317 53.6
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 2.3e-87 326.6 335 51.9
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 3.9e-87 325.9 336 52.1
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 1.1e-86 324.3 337 47.8
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 2.5e-86 323.2 336 51.8
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 3.3e-86 322.8 338 51.5
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 2.1e-85 320.1 344 50.3
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 4.0e-84 315.8 317 52.1
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 2.6e-83 313.2 348 47.1
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 5.8e-83 312.0 321 49.2
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 7.6e-83 311.6 330 48.5
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.7e-82 310.5 330 48.5
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 3.7e-82 309.3 335 46.3
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 1.1e-81 307.8 326 44.5
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.2e-81 306.2 315 50.2
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 4.1e-81 305.8 336 47.9
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 9.2e-81 304.7 264 56.1
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 2.1e-80 303.5 336 47.0
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.1e-80 303.5 335 47.2
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 2.7e-80 303.1 336 47.6
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 4.6e-80 302.4 336 48.5
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 7.8e-80 301.6 338 49.1
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 1.0e-79 301.2 336 47.3
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 2.1e-77 293.5 217 62.7
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 8.9e-76 288.1 336 47.0
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.5e-75 287.3 292 52.7
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 2.0e-75 287.0 336 46.4
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 2.0e-75 287.0 336 46.4
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 2.6e-75 286.6 337 46.6
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 4.4e-75 285.8 312 43.6
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 5.8e-75 285.4 337 46.3
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 5.1e-71 272.3 264 51.9
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.5e-67 260.8 340 39.4
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.0e-67 260.4 319 41.7
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 2.6e-67 260.0 324 41.7
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 9.9e-67 258.1 320 42.2
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.4e-65 253.4 319 41.1
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.5e-62 244.2 210 56.2
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 2.5e-62 243.4 291 43.6
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 9.9e-59 231.5 332 37.0
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 9.9e-59 231.5 341 38.4
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 4.9e-58 229.2 337 37.7
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.4e-57 227.6 221 49.3
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 2.4e-57 226.9 315 36.8
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.2e-56 224.6 264 45.8
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.2e-56 224.6 200 52.5
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 2.8e-53 213.4 276 39.9
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 1.5e-51 207.6 298 36.6
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.4e-51 206.5 321 36.1
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.4e-51 206.5 321 36.1
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 4.8e-45 186.0 135 66.7
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 3.1e-44 183.3 134 61.2
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 6.1e-40 169.1 154 51.3
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.9e-38 164.1 118 68.6
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 4.2e-33 146.4 142 53.5
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.0e-31 140.2 228 33.8
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.0e-30 137.5 163 45.4
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.3e-30 136.7 109 62.4
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.2e-29 134.0 131 51.9
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 4.8e-29 132.9 116 56.9
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 8.2e-21 105.5 90 54.4
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.8e-15 87.8 71 57.7
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 2.6e-14 84.0 62 58.1
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.1e-12 78.6 101 43.6
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 8.5e-10 68.9 74 44.6


User provided reference genes

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