Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g14114_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D008530 1.1e-46 189.5 89 100.0
MBI12_g09300_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D008530 6.8e-20 100.5 69 71.0
Atru.BG.218.p Acer truncatum HOM05D000855 ORTHO05D008530 1.3e-15 86.3 69 59.4
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 1.3e-15 86.3 69 58.0
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 2.3e-15 85.5 69 60.9
Actinidia04698 Actinidia chinensis HOM05D000855 ORTHO05D008530 2.9e-15 85.1 69 59.4
Actinidia19717 Actinidia chinensis HOM05D000855 ORTHO05D008530 2.9e-15 85.1 69 59.4
Haze_20657 Corylus avellana HOM05D000855 ORTHO05D008530 5.0e-15 84.3 69 58.0
Nn2g12986 Nelumbo nucifera HOM05D000855 ORTHO05D008530 6.6e-15 84.0 69 59.4
CSS0013853 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 1.9e-14 82.4 69 58.0
CSS0023086 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 1.9e-14 82.4 87 49.4
Migut.J00415 Erythranthe guttata HOM05D000855 ORTHO05D008530 1.9e-14 82.4 69 55.1
Hma1.2p1_0111F.1_g053850 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 1.9e-14 82.4 69 56.5
Cfa017505 Carpinus fangiana HOM05D000855 ORTHO05D008530 2.5e-14 82.0 69 56.5
Sed0017496 Sechium edule HOM05D000855 ORTHO05D008530 3.3e-14 81.6 69 58.0
CiPaw.02G077000 Carya illinoinensis HOM05D000855 ORTHO05D008530 4.2e-14 81.3 69 55.1
DCAR_003849 Daucus carota HOM05D000855 ORTHO05D008530 4.2e-14 81.3 69 56.5
DCAR_009287 Daucus carota HOM05D000855 ORTHO05D008530 4.2e-14 81.3 69 56.5
FvH4_6g15290 Fragaria vesca HOM05D000855 ORTHO05D008530 4.2e-14 81.3 69 58.0
FAN09G2418 Fragaria x ananassa HOM05D000855 ORTHO05D008530 4.2e-14 81.3 69 58.0
FAN14G2211 Fragaria x ananassa HOM05D000855 ORTHO05D008530 4.2e-14 81.3 69 58.0
Lj2P107T25 Lonicera japonica HOM05D000855 ORTHO05D008530 4.2e-14 81.3 77 51.9
Prupe.6G241600 Prunus persica HOM05D000855 ORTHO05D008530 7.2e-14 80.5 69 55.1
TAR623G1726 Trochodendron aralioides HOM05D000855 ORTHO05D008530 7.2e-14 80.5 69 58.0
RcHm_v2.0_Chr3g0468701 Rosa chinensis HOM05D000855 ORTHO05D008530 9.5e-14 80.1 69 56.5
Eucgr.K03209 Eucalyptus grandis HOM05D000855 ORTHO05D008530 1.2e-13 79.7 69 53.6
QL07p045308 Quercus lobata HOM05D000855 ORTHO05D008530 1.2e-13 79.7 69 53.6
Cc06_g03530 Coffea canephora HOM05D000855 ORTHO05D008530 1.6e-13 79.3 69 53.6
Cpa.g.sc114.43 Carica papaya HOM05D000855 ORTHO05D008530 2.1e-13 79.0 69 55.1
ClCG10G020580 Citrullus lanatus HOM05D001673 ORTHO05D002312 2.1e-13 79.0 77 49.4
SalBow3G1200 Salvia bowleyana HOM05D000855 ORTHO05D008530 2.1e-13 79.0 69 50.7
SalBow3G1712 Salvia bowleyana HOM05D000855 ORTHO05D008530 2.1e-13 79.0 69 50.7
Ciclev10011148m.g Citrus clementina HOM05D000855 ORTHO05D008530 3.6e-13 78.2 69 52.2
TWI53G0567 Tripterygium wilfordii HOM05D000855 ORTHO05D008530 3.6e-13 78.2 69 52.2
RhsimUnG0118600 Rhododendron simsii HOM05D000855 ORTHO05D008530 8.0e-13 77.0 69 56.5
CANSAT80G1453 Cannabis sativa HOM05D000855 ORTHO05D008530 1.0e-12 76.6 69 53.6
MELO3C009312.2 Cucumis melo HOM05D000855 ORTHO05D008530 1.0e-12 76.6 77 48.1
CsaV3_3G035530 Cucumis sativus L. HOM05D000855 ORTHO05D008530 1.0e-12 76.6 77 48.1
Manes.08G003100 Manihot esculenta HOM05D000855 ORTHO05D008530 1.4e-12 76.3 69 52.2
Lalb_Chr06g0171381 Lupinus albus HOM05D000855 ORTHO05D008530 4.0e-12 74.7 71 53.5
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 4.0e-12 74.7 69 53.6
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 5.2e-12 74.3 69 47.8
Peaxi162Scf00005g00472 Petunia axillaris HOM05D000855 ORTHO05D008530 5.2e-12 74.3 69 49.3
Lsat_1_v5_gn_2_109661 Lactuca sativa HOM05D000855 ORTHO05D008530 8.9e-12 73.6 69 49.3
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 8.9e-12 73.6 69 49.3
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 1.5e-11 72.8 69 50.7
Sp3g07980 Schrenkiella parvula HOM05D000855 ORTHO05D008530 1.5e-11 72.8 69 46.4
Sc20g0004090 Simmondsia chinensis HOM05D000855 ORTHO05D008530 1.5e-11 72.8 70 51.4
AL3G20860 Arabidopsis lyrata HOM05D000855 ORTHO05D008530 2.0e-11 72.4 85 41.2
C05p58440 Brassica napus HOM05D000855 ORTHO05D008530 2.0e-11 72.4 69 46.4
BolC5t34496H Brassica oleracea HOM05D000855 ORTHO05D008530 2.0e-11 72.4 69 46.4
Carub.0003s0874 Capsella rubella HOM05D000855 ORTHO05D008530 2.0e-11 72.4 81 43.2
CAN.G608.19 Capsicum annuum HOM05D000855 ORTHO05D008530 2.0e-11 72.4 69 50.7
CARHR084060 Cardamine hirsuta HOM05D000855 ORTHO05D008530 2.0e-11 72.4 69 44.9
Lj5g0021887 Lotus japonicus HOM05D000855 ORTHO05D008530 2.6e-11 72.0 71 52.1
Lalb_Chr02g0153641 Lupinus albus HOM05D000855 ORTHO05D008530 2.6e-11 72.0 71 56.3
A05p39410 Brassica napus HOM05D000855 ORTHO05D008530 4.4e-11 71.2 69 46.4
BraA05t22722Z Brassica rapa HOM05D000855 ORTHO05D008530 4.4e-11 71.2 69 46.4
Thhalv10020113m.g Eutrema salsugineum HOM05D000855 ORTHO05D008530 4.4e-11 71.2 69 43.5
Gohir.A09G152200 Gossypium hirsutum HOM05D000855 ORTHO05D008530 4.4e-11 71.2 69 47.8
Gohir.D09G147800 Gossypium hirsutum HOM05D000855 ORTHO05D008530 4.4e-11 71.2 69 47.8
Gorai.006G168900 Gossypium raimondii HOM05D000855 ORTHO05D008530 4.4e-11 71.2 69 47.8
AT3G09650 Arabidopsis thaliana HOM05D000855 ORTHO05D008530 5.7e-11 70.9 85 41.2
BcaC05g29690 Brassica carinata HOM05D000855 ORTHO05D008530 5.7e-11 70.9 69 44.9
Nitab4.5_0001142g0070 Nicotiana tabacum HOM05D000855 ORTHO05D008530 5.7e-11 70.9 69 47.8
Nitab4.5_0009766g0020 Nicotiana tabacum HOM05D001673 ORTHO05D002312 5.7e-11 70.9 69 47.8
SGA_v2.0_scaffold75G24882 Striga asiatica HOM05D000001 ORTHO05D000003 5.7e-11 70.9 69 49.3
Ah.08g211930 Amaranthus hybridus HOM05D000855 ORTHO05D008530 7.5e-11 70.5 69 50.7
COL.COLO4_27086 Corchorus olitorius HOM05D001673 ORTHO05D002312 7.5e-11 70.5 69 47.8
Sabra16G0092100 Salix brachista HOM05D000855 ORTHO05D008530 7.5e-11 70.5 69 47.8
Aqoxy4G03187 Aquilegia oxysepala HOM05D000855 ORTHO05D008530 9.8e-11 70.1 69 47.8
Thecc.05G053600 Theobroma cacao HOM05D000855 ORTHO05D008530 9.8e-11 70.1 69 47.8
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 1.3e-10 69.7 71 53.5
HanXRQChr14g0454621 Helianthus annuus HOM05D000855 ORTHO05D008530 1.7e-10 69.3 69 46.4
THA.LOC104826985 Tarenaya hassleriana HOM05D000855 ORTHO05D008530 2.2e-10 68.9 69 44.9
ECA238G0798 Erigeron canadensis HOM05D000855 ORTHO05D008530 3.7e-10 68.2 69 44.9
Solyc09g007320.4 Solanum lycopersicum HOM05D000855 ORTHO05D008530 8.3e-10 67.0 69 44.9
Sopen09g002180 Solanum pennellii HOM05D000855 ORTHO05D008530 8.3e-10 67.0 69 44.9
Sopen09g002200 Solanum pennellii HOM05D000855 ORTHO05D008530 8.3e-10 67.0 69 44.9
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 1.1e-09 66.6 71 52.1
Psat6g067680 Pisum sativum HOM05D000855 ORTHO05D008530 1.1e-09 66.6 71 52.1
Duzib093G1875 Durio zibethinus HOM05D000855 ORTHO05D008530 1.8e-09 65.9 69 44.9
PGSC0003DMG400001735 Solanum tuberosum HOM05D000855 ORTHO05D008530 2.4e-09 65.5 69 43.5
CDE08G0924 Ceratophyllum demersum HOM05D000855 ORTHO05D008530 3.1e-09 65.1 90 38.9
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 4.1e-09 64.7 69 44.9
EL10Ac7g17347 Beta vulgaris HOM05D000855 ORTHO05D008530 7.0e-09 63.9 69 46.4
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 7.0e-09 63.9 70 45.7
TPR.G30250 Trifolium pratense HOM05D000855 ORTHO05D008530 1.2e-08 63.2 70 47.1
HPP92_017937 Vanilla planifolia HOM05D000855 ORTHO05D008530 1.2e-08 63.2 72 47.2
AUR62040505 Chenopodium quinoa HOM05D000855 ORTHO05D008530 2.0e-08 62.4 69 43.5
Ca_11448_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008530 2.0e-08 62.4 71 47.9
AUR62042604 Chenopodium quinoa HOM05D000855 ORTHO05D008530 4.5e-08 61.2 69 43.5
Phvul.007G163500 Phaseolus vulgaris HOM05D000855 ORTHO05D008530 2.9e-07 58.5 69 39.1


User provided reference genes

Program Settings