Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI01_g14113_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D008530 9.1e-75 283.5 144 100.0
MBI12_g09300_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D008530 6.6e-41 171.0 132 72.7
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 3.9e-33 145.2 160 52.5
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 2.1e-31 139.4 165 50.9
CSS0013853 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 3.6e-31 138.7 167 50.9
CSS0023086 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 3.6e-31 138.7 167 50.9
Gohir.D09G147800 Gossypium hirsutum HOM05D000855 ORTHO05D008530 1.4e-30 136.7 144 56.2
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 1.8e-30 136.3 176 47.2
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 1.8e-30 136.3 136 57.4
Sed0017496 Sechium edule HOM05D000855 ORTHO05D008530 6.8e-30 134.4 172 45.3
Sabra16G0092100 Salix brachista HOM05D000855 ORTHO05D008530 8.9e-30 134.0 175 47.4
Cc06_g03530 Coffea canephora HOM05D000855 ORTHO05D008530 1.2e-29 133.7 164 48.8
Aqoxy4G03187 Aquilegia oxysepala HOM05D000855 ORTHO05D008530 1.5e-29 133.3 166 49.4
DCAR_003849 Daucus carota HOM05D000855 ORTHO05D008530 1.5e-29 133.3 165 49.1
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 2.6e-29 132.5 171 48.5
ClCG10G020580 Citrullus lanatus HOM05D001673 ORTHO05D002312 2.6e-29 132.5 179 45.3
Nn2g12986 Nelumbo nucifera HOM05D000855 ORTHO05D008530 2.6e-29 132.5 141 54.6
DCAR_009287 Daucus carota HOM05D000855 ORTHO05D008530 3.4e-29 132.1 165 48.5
Haze_20657 Corylus avellana HOM05D000855 ORTHO05D008530 4.4e-29 131.7 172 46.5
RhsimUnG0118600 Rhododendron simsii HOM05D000855 ORTHO05D008530 5.8e-29 131.3 166 48.2
Manes.08G003100 Manihot esculenta HOM05D000855 ORTHO05D008530 7.6e-29 131.0 173 48.0
MELO3C009312.2 Cucumis melo HOM05D000855 ORTHO05D008530 9.9e-29 130.6 171 46.8
TWI53G0567 Tripterygium wilfordii HOM05D000855 ORTHO05D008530 1.3e-28 130.2 169 47.9
CsaV3_3G035530 Cucumis sativus L. HOM05D000855 ORTHO05D008530 1.7e-28 129.8 171 46.8
Cfa017505 Carpinus fangiana HOM05D000855 ORTHO05D008530 2.2e-28 129.4 172 45.9
Prupe.6G241600 Prunus persica HOM05D000855 ORTHO05D008530 2.9e-28 129.0 159 50.9
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 4.9e-28 128.3 181 46.4
CAN.G608.19 Capsicum annuum HOM05D000855 ORTHO05D008530 8.4e-28 127.5 164 47.6
Ah.08g211930 Amaranthus hybridus HOM05D000855 ORTHO05D008530 1.1e-27 127.1 174 47.1
HanXRQChr14g0454621 Helianthus annuus HOM05D000855 ORTHO05D008530 1.1e-27 127.1 166 46.4
QL07p045308 Quercus lobata HOM05D000855 ORTHO05D008530 1.1e-27 127.1 172 47.7
PGSC0003DMG400001735 Solanum tuberosum HOM05D000855 ORTHO05D008530 1.1e-27 127.1 164 47.0
Lalb_Chr06g0171381 Lupinus albus HOM05D000855 ORTHO05D008530 1.9e-27 126.3 178 44.9
Nitab4.5_0001142g0070 Nicotiana tabacum HOM05D000855 ORTHO05D008530 2.4e-27 125.9 158 47.5
Duzib093G1875 Durio zibethinus HOM05D000855 ORTHO05D008530 3.2e-27 125.6 187 43.9
Actinidia19717 Actinidia chinensis HOM05D000855 ORTHO05D008530 5.4e-27 124.8 159 47.8
CANSAT80G1453 Cannabis sativa HOM05D000855 ORTHO05D008530 7.1e-27 124.4 156 46.2
Nitab4.5_0009766g0020 Nicotiana tabacum HOM05D001673 ORTHO05D002312 7.1e-27 124.4 158 47.5
Sc20g0004090 Simmondsia chinensis HOM05D000855 ORTHO05D008530 7.1e-27 124.4 176 44.3
SGA_v2.0_scaffold75G24882 Striga asiatica HOM05D000001 ORTHO05D000003 7.1e-27 124.4 189 42.9
Ca_11448_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008530 9.2e-27 124.0 175 44.6
Sopen09g002180 Solanum pennellii HOM05D000855 ORTHO05D008530 9.2e-27 124.0 164 45.7
Sopen09g002200 Solanum pennellii HOM05D000855 ORTHO05D008530 9.2e-27 124.0 164 45.7
Lj5g0021887 Lotus japonicus HOM05D000855 ORTHO05D008530 1.6e-26 123.2 171 44.4
Gorai.006G168900 Gossypium raimondii HOM05D000855 ORTHO05D008530 3.5e-26 122.1 186 43.5
Lalb_Chr02g0153641 Lupinus albus HOM05D000855 ORTHO05D008530 4.6e-26 121.7 180 42.2
Atru.BG.218.p Acer truncatum HOM05D000855 ORTHO05D008530 6.0e-26 121.3 156 47.4
Hma1.2p1_0111F.1_g053850 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 1.7e-25 119.8 158 47.5
Eucgr.K03209 Eucalyptus grandis HOM05D000855 ORTHO05D008530 2.3e-25 119.4 189 41.8
CDE08G0924 Ceratophyllum demersum HOM05D000855 ORTHO05D008530 3.0e-25 119.0 152 48.0
HPP92_017937 Vanilla planifolia HOM05D000855 ORTHO05D008530 3.0e-25 119.0 167 44.3
Gohir.A09G152200 Gossypium hirsutum HOM05D000855 ORTHO05D008530 3.9e-25 118.6 185 43.2
SalBow3G1200 Salvia bowleyana HOM05D000855 ORTHO05D008530 5.1e-25 118.2 171 45.0
SalBow3G1712 Salvia bowleyana HOM05D000855 ORTHO05D008530 5.1e-25 118.2 171 45.0
THA.LOC104826985 Tarenaya hassleriana HOM05D000855 ORTHO05D008530 5.1e-25 118.2 187 41.7
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 5.6e-24 114.8 194 40.7
CiPaw.02G077000 Carya illinoinensis HOM05D000855 ORTHO05D008530 9.6e-24 114.0 153 47.1
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 9.6e-24 114.0 162 43.2
Psat6g067680 Pisum sativum HOM05D000855 ORTHO05D008530 9.6e-24 114.0 171 43.3
Peaxi162Scf00005g00472 Petunia axillaris HOM05D000855 ORTHO05D008530 1.2e-23 113.6 149 46.3
ATR1159G087 Amborella trichopoda HOM05D000855 ORTHO05D008530 1.6e-23 113.2 166 42.2
Thhalv10020113m.g Eutrema salsugineum HOM05D000855 ORTHO05D008530 1.6e-23 113.2 194 39.2
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 2.1e-23 112.8 179 41.3
EL10Ac7g17347 Beta vulgaris HOM05D000855 ORTHO05D008530 3.6e-23 112.1 150 47.3
AUR62040505 Chenopodium quinoa HOM05D000855 ORTHO05D008530 3.6e-23 112.1 182 43.4
Lsat_1_v5_gn_2_109661 Lactuca sativa HOM05D000855 ORTHO05D008530 6.2e-23 111.3 153 44.4
AT3G09650 Arabidopsis thaliana HOM05D000855 ORTHO05D008530 8.1e-23 110.9 189 39.7
Phvul.007G163500 Phaseolus vulgaris HOM05D000855 ORTHO05D008530 8.1e-23 110.9 185 40.0
TPR.G30250 Trifolium pratense HOM05D000855 ORTHO05D008530 1.1e-22 110.5 167 42.5
AUR62042604 Chenopodium quinoa HOM05D000855 ORTHO05D008530 1.8e-22 109.8 167 44.9
Thecc.05G053600 Theobroma cacao HOM05D000855 ORTHO05D008530 2.4e-22 109.4 186 41.4
TAR623G1726 Trochodendron aralioides HOM05D000855 ORTHO05D008530 2.4e-22 109.4 134 50.7
Zm00001eb156000 Zea mays HOM05D000855 ORTHO05D008530 6.9e-22 107.8 170 39.4
Os11g0103000 Oryza sativa ssp. japonica HOM05D000855 ORTHO05D008530 2.0e-21 106.3 156 43.6
Os12g0102600 Oryza sativa ssp. japonica HOM05D000855 ORTHO05D008530 2.0e-21 106.3 156 43.6
Ciclev10011148m.g Citrus clementina HOM05D000855 ORTHO05D008530 2.6e-21 105.9 146 45.9
Sp3g07980 Schrenkiella parvula HOM05D000855 ORTHO05D008530 2.6e-21 105.9 187 37.4
C05p58440 Brassica napus HOM05D000855 ORTHO05D008530 5.8e-21 104.8 182 39.6
BolC5t34496H Brassica oleracea HOM05D000855 ORTHO05D008530 5.8e-21 104.8 182 39.6
Cpa.g.sc114.43 Carica papaya HOM05D000855 ORTHO05D008530 5.8e-21 104.8 182 39.6
COL.COLO4_27086 Corchorus olitorius HOM05D001673 ORTHO05D002312 7.6e-21 104.4 160 43.8
FvH4_6g15290 Fragaria vesca HOM05D000855 ORTHO05D008530 7.6e-21 104.4 143 47.6
FAN14G2211 Fragaria x ananassa HOM05D000855 ORTHO05D008530 7.6e-21 104.4 143 47.6
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 7.6e-21 104.4 186 39.2
FAN09G2418 Fragaria x ananassa HOM05D000855 ORTHO05D008530 1.3e-20 103.6 143 47.6
A05p39410 Brassica napus HOM05D000855 ORTHO05D008530 1.7e-20 103.2 184 37.5
BraA05t22722Z Brassica rapa HOM05D000855 ORTHO05D008530 1.7e-20 103.2 184 37.5
SEGI_13860 Sequoiadendron giganteum HOM05D000855 ORTHO05D008530 6.4e-20 101.3 166 41.0
Actinidia04698 Actinidia chinensis HOM05D000855 ORTHO05D008530 8.4e-20 100.9 138 46.4
ECA238G0798 Erigeron canadensis HOM05D000855 ORTHO05D008530 2.4e-19 99.4 160 41.2
SEGI_38382 Sequoiadendron giganteum HOM05D000855 ORTHO05D008530 9.3e-19 97.4 136 42.6
Solyc09g007320.4 Solanum lycopersicum HOM05D000855 ORTHO05D008530 6.0e-18 94.7 146 44.5
Carub.0003s0874 Capsella rubella HOM05D000855 ORTHO05D008530 1.0e-17 94.0 180 37.8
BcaC05g29690 Brassica carinata HOM05D000855 ORTHO05D008530 8.7e-17 90.9 185 36.8
Migut.J00415 Erythranthe guttata HOM05D000855 ORTHO05D008530 1.1e-16 90.5 144 43.1
Hma1.2p1_0111F.1_g053860 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 1.1e-16 90.5 82 61.0
AL3G20860 Arabidopsis lyrata HOM05D000855 ORTHO05D008530 7.3e-16 87.8 69 62.3
CARHR084060 Cardamine hirsuta HOM05D000855 ORTHO05D008530 9.6e-16 87.4 82 57.3
arahy.Tifrunner.gnm1.ann1.SJQ0PQ Arachis hypogaea HOM05D000855 ORTHO05D008530 2.0e-13 79.7 178 33.7
RcHm_v2.0_Chr3g0468701 Rosa chinensis HOM05D000855 ORTHO05D008530 5.4e-11 71.6 140 36.4
arahy.Tifrunner.gnm1.ann1.GVB1H0 Arachis hypogaea HOM05D000855 ORTHO05D008530 1.6e-10 70.1 180 30.0
FAN02G3427 Fragaria x ananassa HOM05D000855 ORTHO05D008530 3.3e-08 62.4 49 61.2
Pp3c12_2390 Physcomitrium patens HOM05D000855 ORTHO05D008530 3.3e-08 62.4 146 33.6
SMO356G0123 Selaginella moellendorffii HOM05D000855 ORTHO05D008530 3.1e-06 55.8 60 45.0


User provided reference genes

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