Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lju50A23T28 Lonicera japonica HOM05D006401 ORTHO05D007864 1.1e-68 263.1 127 100.0
Dinv12612 Davidia involucrata HOM05D006401 ORTHO05D007864 1.1e-44 183.3 124 72.6
Cc00_g00110 Coffea canephora HOM05D006401 ORTHO05D007864 3.8e-40 168.3 120 66.7
TAR626G0078 Trochodendron aralioides HOM05D006401 ORTHO05D007864 4.9e-40 167.9 117 68.4
GSVIVG01013042001 Vitis vinifera HOM05D006401 ORTHO05D007864 2.4e-39 165.6 116 67.2
DCAR_010674 Daucus carota HOM05D006401 ORTHO05D007864 1.2e-38 163.3 106 73.6
CAN.G146.3 Capsicum annuum HOM05D006401 ORTHO05D007864 2.1e-38 162.5 106 69.8
VMungo0251G1477 Vigna mungo HOM05D006401 ORTHO05D007864 2.1e-38 162.5 106 71.7
Phvul.002G302500 Phaseolus vulgaris HOM05D006401 ORTHO05D007864 2.7e-38 162.2 105 72.4
ClCG06G014090 Citrullus lanatus HOM05D006401 ORTHO05D007864 3.5e-38 161.8 105 74.3
MSTRG.5961 Avicennia marina HOM05D006401 ORTHO05D007864 4.6e-38 161.4 110 70.9
Oeu021025.1 Olea europaea HOM05D006401 ORTHO05D007864 4.6e-38 161.4 112 68.8
Ca_17430_v3 Cicer arietinum L. HOM05D006401 ORTHO05D007864 1.3e-37 159.8 110 69.1
Ca_17439_v3 Cicer arietinum L. HOM05D006401 ORTHO05D007864 1.3e-37 159.8 110 69.1
Glyma.08G027300 Glycine max HOM05D006401 ORTHO05D007864 1.8e-37 159.5 105 71.4
Sabra18G0121600 Salix brachista HOM05D006401 ORTHO05D007864 1.8e-37 159.5 117 65.8
SalBow6G4903 Salvia bowleyana HOM05D006401 ORTHO05D007864 2.3e-37 159.1 104 70.2
Actinidia02474 Actinidia chinensis HOM05D006401 ORTHO05D007864 3.0e-37 158.7 114 64.9
Sabra18G0128800 Salix brachista HOM05D006401 ORTHO05D007864 3.9e-37 158.3 118 66.1
Hma1.2p1_0314F.1_g122060 Hydrangea macrophylla HOM05D006401 ORTHO05D007864 5.1e-37 157.9 106 70.8
QL11p008681 Quercus lobata HOM05D006401 ORTHO05D007864 5.1e-37 157.9 110 66.4
Psat7g020960 Pisum sativum HOM05D006401 ORTHO05D007864 6.7e-37 157.5 111 67.6
Potri.018G147400 Populus trichocarpa HOM05D006401 ORTHO05D007864 1.1e-36 156.8 118 65.3
Nitab4.5_0008632g0020 Nicotiana tabacum HOM05D006401 ORTHO05D007864 1.5e-36 156.4 105 69.5
Rhsim03G0113000 Rhododendron simsii HOM05D006401 ORTHO05D007864 1.5e-36 156.4 123 61.8
CsaV3_1G004580 Cucumis sativus L. HOM05D006401 ORTHO05D007864 1.9e-36 156.0 105 71.4
Lalb_Chr05g0223791 Lupinus albus HOM05D006401 ORTHO05D007864 2.5e-36 155.6 95 73.7
CANSAT80G2545 Cannabis sativa HOM05D006401 ORTHO05D007864 3.3e-36 155.2 103 69.9
PGSC0003DMG401009562 Solanum tuberosum HOM05D006401 ORTHO05D007864 5.6e-36 154.5 112 67.9
Glyma.05G220800 Glycine max HOM05D006401 ORTHO05D007864 7.4e-36 154.1 105 70.5
Solyc07g017260.2 Solanum lycopersicum HOM05D006401 ORTHO05D007864 7.4e-36 154.1 112 67.9
Nitab4.5_0000899g0070 Nicotiana tabacum HOM05D006401 ORTHO05D007864 1.3e-35 153.3 100 69.0
Sed0005150 Sechium edule HOM05D006401 ORTHO05D007864 1.3e-35 153.3 108 67.6
Eucgr.C02172 Eucalyptus grandis HOM05D006401 ORTHO05D007864 1.6e-35 152.9 111 65.8
PGR044G1973 Punica granatum HOM05D006401 ORTHO05D007864 1.6e-35 152.9 107 67.3
Sopen07g005990 Solanum pennellii HOM05D006401 ORTHO05D007864 1.6e-35 152.9 109 68.8
Migut.J00842 Erythranthe guttata HOM05D006401 ORTHO05D007864 2.8e-35 152.1 117 61.5
Sc23g0004370 Simmondsia chinensis HOM05D006401 ORTHO05D007864 2.8e-35 152.1 88 78.4
SGA_v2.0_scaffold318G48475 Striga asiatica HOM05D006401 ORTHO05D007864 2.8e-35 152.1 102 67.6
TPR.G32971 Trifolium pratense HOM05D006401 ORTHO05D007864 3.7e-35 151.8 111 65.8
MBI13_g31574_MAGBIO Magnolia biondii HOM05D006401 ORTHO05D007864 4.8e-35 151.4 114 62.3
HanXRQChr10g0309551 Helianthus annuus HOM05D006401 ORTHO05D007864 6.2e-35 151.0 92 75.0
Medtr8g101250 Medicago truncatula HOM05D006401 ORTHO05D007864 8.1e-35 150.6 110 62.7
Os06g0663100 Oryza sativa ssp. japonica HOM05D006401 ORTHO05D007864 8.1e-35 150.6 84 79.8
CSS0033991 Camellia sinensis var. sinensis HOM05D006401 ORTHO05D007864 1.1e-34 150.2 99 71.7
ECA236G1652 Erigeron canadensis HOM05D006401 ORTHO05D007864 1.1e-34 150.2 103 67.0
Prupe.1G064000 Prunus persica HOM05D006401 ORTHO05D007864 1.1e-34 150.2 87 75.9
Atru.chr7.892 Acer truncatum HOM05D006401 ORTHO05D007864 1.8e-34 149.4 110 63.6
MELO3C017384.2 Cucumis melo HOM05D006401 ORTHO05D007864 1.8e-34 149.4 101 70.3
arahy.Tifrunner.gnm1.ann1.IH6H8X Arachis hypogaea HOM05D006401 ORTHO05D007864 2.4e-34 149.1 136 57.4
Aqoxy7G02629 Aquilegia oxysepala HOM05D006401 ORTHO05D007864 3.1e-34 148.7 99 71.7
Zm00001eb274430 Zea mays HOM05D006401 ORTHO05D007864 4.0e-34 148.3 86 75.6
ATR0626G158 Amborella trichopoda HOM05D006401 ORTHO05D007864 5.3e-34 147.9 100 67.0
Nn8g41133 Nelumbo nucifera HOM05D006401 ORTHO05D007864 5.3e-34 147.9 98 69.4
RcHm_v2.0_Chr4g0397611 Rosa chinensis HOM05D006401 ORTHO05D007864 6.9e-34 147.5 96 70.8
Cpa.g.sc115.22 Carica papaya HOM05D006401 ORTHO05D007864 1.2e-33 146.7 92 72.8
Lj4g0001613 Lotus japonicus HOM05D006401 ORTHO05D007864 1.2e-33 146.7 95 69.5
CiPaw.16G104000 Carya illinoinensis HOM05D006401 ORTHO05D007864 3.4e-33 145.2 83 75.9
arahy.Tifrunner.gnm1.ann1.Y2X24R Arachis hypogaea HOM05D006401 ORTHO05D007864 5.8e-33 144.4 136 56.6
FvH4_4g06050 Fragaria vesca HOM05D006401 ORTHO05D007864 5.8e-33 144.4 95 71.6
FAN12G0292 Fragaria x ananassa HOM05D006401 ORTHO05D007864 5.8e-33 144.4 95 71.6
COL.COLO4_23416 Corchorus olitorius HOM05D006401 ORTHO05D007864 7.6e-33 144.1 99 66.7
MD13G1232500 Malus domestica HOM05D006401 ORTHO05D007864 9.9e-33 143.7 83 77.1
Thecc.09G196700 Theobroma cacao HOM05D006401 ORTHO05D007864 1.3e-32 143.3 83 75.9
FAN17G0150 Fragaria x ananassa HOM05D006401 ORTHO05D007864 1.7e-32 142.9 86 74.4
Manes.02G221700 Manihot esculenta HOM05D006401 ORTHO05D007864 1.7e-32 142.9 119 58.0
Ciclev10008288m.g Citrus clementina HOM05D006401 ORTHO05D007864 2.2e-32 142.5 124 58.9
PSO170G1271 Papaver somniferum HOM05D006401 ORTHO05D007864 2.2e-32 142.5 92 68.5
PSO063G4133 Papaver somniferum HOM05D006401 ORTHO05D007864 3.8e-32 141.7 92 68.5
SHI03133 Sapria himalayana HOM05D006401 ORTHO05D007864 6.4e-32 141.0 85 75.3
CDE05G1304 Ceratophyllum demersum HOM05D006401 ORTHO05D007864 8.4e-32 140.6 114 58.8
Gohir.D04G087600 Gossypium hirsutum HOM05D006401 ORTHO05D007864 1.1e-31 140.2 83 75.9
Gorai.012G097600 Gossypium raimondii HOM05D006401 ORTHO05D007864 1.1e-31 140.2 83 75.9
Ah.11g043600 Amaranthus hybridus HOM05D006401 ORTHO05D007864 1.9e-31 139.4 83 75.9
THA.LOC104826573 Tarenaya hassleriana HOM05D006401 ORTHO05D007864 1.9e-31 139.4 113 60.2
Gohir.A04G052200 Gossypium hirsutum HOM05D006401 ORTHO05D007864 2.4e-31 139.0 81 77.8
EL10Ac2g03627 Beta vulgaris HOM05D006401 ORTHO05D007864 4.2e-31 138.3 89 68.5
HPP92_019927 Vanilla planifolia HOM05D006401 ORTHO05D007864 4.2e-31 138.3 80 80.0
Duzib170G0999 Durio zibethinus HOM05D006401 ORTHO05D007864 7.1e-31 137.5 83 73.5
Sp7g07040 Schrenkiella parvula HOM05D006401 ORTHO05D007864 1.2e-30 136.7 118 56.8
Carub.0007s3123 Capsella rubella HOM05D006401 ORTHO05D007864 2.7e-30 135.6 107 60.7
Hund19359 Selenicereus undatus HOM05D006401 ORTHO05D007864 2.7e-30 135.6 96 60.4
AUR62020726 Chenopodium quinoa HOM05D006401 ORTHO05D007864 6.0e-30 134.4 110 61.8
AUR62027987 Chenopodium quinoa HOM05D006401 ORTHO05D007864 7.9e-30 134.0 106 59.4
AT5G35400 Arabidopsis thaliana HOM05D006401 ORTHO05D007864 1.0e-29 133.7 85 71.8
BcaB04g18045 Brassica carinata HOM05D006401 ORTHO05D007864 1.8e-29 132.9 109 57.8
FAN22G1023 Fragaria x ananassa HOM05D006401 ORTHO05D007864 1.8e-29 132.9 82 72.0
Aa31LG8G10590 Aethionema arabicum HOM05D006401 ORTHO05D007864 2.3e-29 132.5 114 57.0
AL7G44200 Arabidopsis lyrata HOM05D006401 ORTHO05D007864 3.0e-29 132.1 111 57.7
A08p09710 Brassica napus HOM05D006401 ORTHO05D007864 3.0e-29 132.1 85 70.6
BraA08t32967Z Brassica rapa HOM05D006401 ORTHO05D007864 3.0e-29 132.1 85 70.6
Lsat_1_v5_gn_5_80461 Lactuca sativa HOM05D006401 ORTHO05D007864 3.0e-29 132.1 108 56.5
Thhalv10003453m.g Eutrema salsugineum HOM05D006401 ORTHO05D007864 6.7e-29 131.0 85 70.6
BcaC07g37665 Brassica carinata HOM05D006401 ORTHO05D007864 1.1e-28 130.2 85 70.6
BolC8t48034H Brassica oleracea HOM05D006401 ORTHO05D007864 1.1e-28 130.2 85 70.6
Cfa020752 Carpinus fangiana HOM05D006401 ORTHO05D007864 2.2e-24 115.9 106 56.6
SMO232G0120 Selaginella moellendorffii HOM05D006401 ORTHO05D007864 1.8e-21 106.3 83 60.2
CBR_g44387 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-15 86.7 90 51.1
Haze_19099 Corylus avellana HOM05D006401 ORTHO05D007864 5.5e-15 84.7 61 63.9
MELO3C009013.2 Cucumis melo HOM05D006401 ORTHO05D007864 2.5e-12 75.9 51 62.7
CARHR217420 Cardamine hirsuta HOM05D006401 ORTHO05D007864 4.1e-10 68.6 47 70.2
VMungo0464G1025 Vigna mungo HOM05D006401 ORTHO05D007864 6.9e-10 67.8 41 75.6
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 5.5e-07 58.2 74 41.9
MELO3C030585.2 Cucumis melo HOM05D006401 ORTHO05D007864 9.4e-07 57.4 35 68.6
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 1.2e-06 57.0 74 40.5
Cre13.g591501 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 2.7e-06 55.8 81 35.8
Oeu036951.3 Olea europaea HOM05D006401 ORTHO05D007864 2.7e-06 55.8 35 68.6


User provided reference genes

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