Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A92G12 Lonicera japonica HOM05D001538 ORTHO05D036482 1.7e-105 386.0 191 100.0
Lj9C95T7 Lonicera japonica HOM05D023652 ORTHO05D036482 2.6e-37 159.5 78 96.2
Lj1P829T29 Lonicera japonica HOM05D001538 ORTHO05D235877 8.8e-33 144.4 88 85.2
Lj9P658T31 Lonicera japonica HOM05D001538 ORTHO05D011045 1.8e-30 136.7 91 81.3
Lj5C610T14 Lonicera japonica HOM05D001538 ORTHO05D007090 3.6e-26 122.5 161 47.8
Lj3P693T50 Lonicera japonica HOM05D001538 ORTHO05D011045 1.0e-25 120.9 63 93.7
Lj4C847T12 Lonicera japonica HOM05D001538 ORTHO05D007090 6.3e-23 111.7 130 53.1
Lj1A584T33 Lonicera japonica HOM05D001538 ORTHO05D029994 2.4e-22 109.8 128 50.8
Lj2C15G8 Lonicera japonica HOM05D001538 ORTHO05D234020 1.0e-20 104.4 55 92.7
Lj7C583G3 Lonicera japonica HOM05D005757 ORTHO05D007090 1.7e-20 103.6 161 44.7
Lj1C725T15 Lonicera japonica HOM05D001538 ORTHO05D029994 3.8e-20 102.4 148 46.6
Lju1040C0G1 Lonicera japonica HOM05D002009 ORTHO05D006831 5.3e-14 82.0 48 79.2
Lj9C89G5 Lonicera japonica HOM05D002009 ORTHO05D006831 7.0e-14 81.6 48 77.1
Lj5C834G10 Lonicera japonica HOM05D001538 ORTHO05D000007 2.7e-13 79.7 139 39.6
Lju2566C0T15 Lonicera japonica HOM05D012945 ORTHO05D000007 5.9e-13 78.6 92 51.1
Lju760A7G21 Lonicera japonica HOM05D001538 ORTHO05D011045 5.9e-13 78.6 121 43.0
Lj2E800T0 Lonicera japonica HOM05D001538 ORTHO05D007090 1.0e-12 77.8 61 63.9
Lju41C39G13 Lonicera japonica HOM05D001538 ORTHO05D011045 3.2e-11 72.8 92 48.9
Lj2C23T9 Lonicera japonica HOM05D001538 ORTHO05D011045 9.4e-11 71.2 92 47.8
Lj7A234T36 Lonicera japonica HOM05D001538 ORTHO05D234496 9.4e-11 71.2 98 43.9
Lj7C620T12 Lonicera japonica HOM05D001538 ORTHO05D011045 2.1e-10 70.1 94 47.9
Lj4C412G6 Lonicera japonica HOM05D001538 ORTHO05D011045 6.1e-10 68.6 92 46.7
Lj7C754G12 Lonicera japonica HOM05D001538 ORTHO05D004667 1.4e-09 67.4 92 48.9
Lj2A1036G45 Lonicera japonica HOM05D001538 ORTHO05D000007 2.3e-09 66.6 92 45.7
Lj6C526G1 Lonicera japonica HOM05D001538 ORTHO05D011045 3.0e-09 66.2 93 44.1
Lj1C330G10 Lonicera japonica HOM05D001538 ORTHO05D000007 4.0e-09 65.9 51 62.7
Lj3C187G11 Lonicera japonica HOM05D001538 ORTHO05D004667 6.8e-09 65.1 89 49.4
Lju2566A0G20 Lonicera japonica HOM05D001538 ORTHO05D004667 2.0e-08 63.5 135 38.5
Lj2A887T25 Lonicera japonica HOM05D001538 ORTHO05D000007 2.6e-08 63.2 50 62.0
Solyc01g099220.3 Solanum lycopersicum HOM05D002009 ORTHO05D006831 2.6e-08 63.2 72 48.6
Sopen01g042770 Solanum pennellii HOM05D002009 ORTHO05D006831 2.6e-08 63.2 72 48.6
Lj8A740G21 Lonicera japonica HOM05D001538 ORTHO05D000007 4.4e-08 62.4 210 29.0
Lj1A1068G46 Lonicera japonica HOM05D001538 ORTHO05D011045 9.8e-08 61.2 155 33.5
Lj1A545G61 Lonicera japonica HOM05D000764 ORTHO05D011045 9.8e-08 61.2 155 33.5
Peaxi162Scf00037g00637 Petunia axillaris HOM05D002009 ORTHO05D006831 9.8e-08 61.2 72 48.6
GSVIVG01000087001 Vitis vinifera HOM05D002009 ORTHO05D006831 1.7e-07 60.5 45 60.0
Lj2A90T53 Lonicera japonica HOM05D001538 ORTHO05D235323 2.2e-07 60.1 161 31.1
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 2.2e-07 60.1 166 31.9
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 2.2e-07 60.1 156 33.3
FAN05G0625 Fragaria x ananassa HOM05D002009 ORTHO05D006831 2.8e-07 59.7 77 45.5
Lj2C1218T8 Lonicera japonica HOM05D001538 ORTHO05D011045 2.8e-07 59.7 155 32.9
Ciclev10003639m.g Citrus clementina HOM05D002009 ORTHO05D006831 3.7e-07 59.3 48 60.4
CAN.G1034.31 Capsicum annuum HOM05D002009 ORTHO05D006831 4.8e-07 58.9 53 58.5
FvH4_6g06120 Fragaria vesca HOM05D002009 ORTHO05D006831 4.8e-07 58.9 77 45.5
Rhsim12G0060600 Rhododendron simsii HOM05D002009 ORTHO05D006831 4.8e-07 58.9 70 45.7
Haze_04184 Corylus avellana HOM05D002009 ORTHO05D006831 8.3e-07 58.2 60 45.0
CSS0012384 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 1.1e-06 57.8 72 44.4
CSS0006817 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 1.4e-06 57.4 72 44.4
QL03p054350 Quercus lobata HOM05D003219 ORTHO05D005190 1.4e-06 57.4 56 51.8
Lju41C55T6 Lonicera japonica HOM05D001538 ORTHO05D235798 1.8e-06 57.0 110 39.1
Medtr7g113380 Medicago truncatula HOM05D002009 ORTHO05D006831 1.8e-06 57.0 63 50.8
Psat0s2197g0080 Pisum sativum HOM05D002009 ORTHO05D006831 1.8e-06 57.0 62 51.6
Dinv40301 Davidia involucrata HOM05D002009 ORTHO05D006831 2.4e-06 56.6 120 35.8
Lj1A1222T74 Lonicera japonica HOM05D001538 ORTHO05D234008 2.4e-06 56.6 191 30.9
Lj9P81T10 Lonicera japonica HOM05D001538 ORTHO05D011045 2.4e-06 56.6 160 30.0
Oeu002661.1 Olea europaea HOM05D002009 ORTHO05D006831 2.4e-06 56.6 44 56.8
Prupe.6G324000 Prunus persica HOM05D002009 ORTHO05D006831 2.4e-06 56.6 73 46.6
QL03p007353 Quercus lobata HOM05D002009 ORTHO05D006831 2.4e-06 56.6 77 41.6
QL03p007751 Quercus lobata HOM05D002009 ORTHO05D006831 2.4e-06 56.6 77 41.6
Atru.chr2.372 Acer truncatum HOM05D002009 ORTHO05D006831 4.1e-06 55.8 56 51.8
Ca_05812_v3 Cicer arietinum L. HOM05D002009 ORTHO05D006831 4.1e-06 55.8 62 50.0
Cc02_g33310 Coffea canephora HOM05D002009 ORTHO05D006831 4.1e-06 55.8 34 70.6
MD05G1053400 Malus domestica HOM05D002009 ORTHO05D006831 5.4e-06 55.5 34 70.6
Lj3P275T12 Lonicera japonica HOM05D001538 ORTHO05D011045 7.0e-06 55.1 160 32.5
FAN09G2733 Fragaria x ananassa HOM05D002009 ORTHO05D006831 9.1e-06 54.7 47 53.2
Lj7C143G3 Lonicera japonica HOM05D001538 ORTHO05D011045 9.1e-06 54.7 159 31.4
RcHm_v2.0_Chr3g0455131 Rosa chinensis HOM05D002009 ORTHO05D006831 9.1e-06 54.7 62 45.2


User provided reference genes

Program Settings