Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 2.9e-179 631.7 307 100.0
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 7.7e-55 218.4 285 42.8
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 5.0e-54 215.7 285 42.5
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 1.1e-53 214.5 285 41.8
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.1e-53 214.5 285 41.8
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.6e-52 210.7 283 42.4
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 2.1e-52 210.3 285 41.8
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.8e-51 207.2 285 42.1
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 2.3e-51 206.8 304 39.5
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.0e-51 206.5 285 40.0
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 8.8e-51 204.9 283 40.6
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 1.5e-50 204.1 285 40.0
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 1.5e-50 204.1 283 39.2
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 2.0e-50 203.8 285 41.1
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 3.3e-50 203.0 285 40.7
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 4.4e-50 202.6 282 40.8
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 5.7e-50 202.2 306 39.9
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 1.3e-49 201.1 284 41.5
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 1.3e-49 201.1 287 40.1
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.8e-49 199.9 283 39.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 2.8e-49 199.9 305 39.7
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 4.8e-49 199.1 306 37.9
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 1.4e-48 197.6 274 39.8
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 1.8e-48 197.2 283 39.9
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 2.4e-48 196.8 283 41.0
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.1e-48 196.1 289 39.1
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 4.1e-48 196.1 284 39.4
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 7.0e-48 195.3 289 39.4
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 9.1e-48 194.9 283 40.6
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.5e-47 192.6 287 39.4
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 1.0e-46 191.4 285 38.9
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.7e-46 190.7 285 40.4
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 2.9e-46 189.9 282 37.6
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 8.5e-46 188.3 306 38.2
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 8.5e-46 188.3 284 37.3
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 1.1e-45 188.0 286 37.1
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.9e-45 187.2 283 37.1
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 3.2e-45 186.4 283 36.7
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 3.2e-45 186.4 283 37.1
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 3.2e-45 186.4 284 40.1
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 5.5e-45 185.7 283 38.5
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 9.4e-45 184.9 286 38.5
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 1.6e-44 184.1 305 37.7
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.0e-43 181.4 278 38.8
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 1.0e-43 181.4 282 37.6
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 2.3e-43 180.3 283 36.4
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 2.3e-43 180.3 305 36.1
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 4.0e-43 179.5 283 36.4
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 4.0e-43 179.5 306 36.6
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 5.2e-43 179.1 282 36.5
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 8.8e-43 178.3 281 37.7
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 1.2e-42 177.9 284 38.0
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 1.5e-42 177.6 283 36.0
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 1.5e-42 177.6 284 36.3
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 2.0e-42 177.2 283 36.0
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 2.0e-42 177.2 304 35.5
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 2.6e-42 176.8 283 36.0
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 2.6e-42 176.8 283 37.1
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 2.6e-42 176.8 284 38.4
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 3.3e-42 176.4 284 37.3
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 4.4e-42 176.0 304 35.9
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 4.4e-42 176.0 304 35.9
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 4.4e-42 176.0 283 35.3
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 5.7e-42 175.6 291 35.7
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 9.7e-42 174.9 306 35.6
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 2.8e-41 173.3 283 35.3
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 3.7e-41 172.9 279 36.6
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 1.8e-40 170.6 292 34.9
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 2.4e-40 170.2 279 35.1
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 7.0e-40 168.7 205 43.9
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.7e-39 166.8 273 35.5
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 4.5e-39 166.0 283 34.3
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 5.9e-39 165.6 283 33.6
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 1.0e-38 164.9 279 34.8
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 1.0e-38 164.9 306 36.3
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 3.8e-38 162.9 267 36.3
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 5.0e-38 162.5 305 36.1
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 6.5e-38 162.2 287 34.1
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 6.5e-38 162.2 285 35.8
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 7.2e-37 158.7 283 36.4
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 4.7e-36 156.0 267 35.2
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 1.4e-35 154.5 306 34.3
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 2.6e-34 150.2 282 33.0
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 7.5e-34 148.7 283 33.2
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 3.7e-33 146.4 284 33.1
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 3.1e-32 143.3 282 33.3
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 5.4e-32 142.5 207 38.6
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 1.6e-31 141.0 285 32.6
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 4.5e-31 139.4 285 33.0
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.3e-30 137.9 118 55.1
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 2.9e-30 136.7 269 31.6
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 5.5e-29 132.5 258 35.3
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.8e-27 127.5 191 38.7
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 3.0e-27 126.7 278 31.3
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 1.5e-26 124.4 281 30.2
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 5.7e-26 122.5 105 55.2
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 4.9e-25 119.4 99 57.6
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.7e-22 110.9 212 34.0
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 6.6e-22 109.0 212 33.5
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 8.0e-20 102.1 209 34.0
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.0e-20 102.1 209 34.0
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-19 101.7 130 42.3
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.5e-18 97.8 214 32.2
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.4e-18 96.7 130 40.8
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 6.6e-14 82.4 109 41.3
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-11 75.1 191 30.4
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 4.0e-11 73.2 111 32.4
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 3.4e-10 70.1 90 45.6
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 1.0e-06 58.5 106 33.0
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 2.3e-06 57.4 89 41.6
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 3.0e-06 57.0 42 64.3
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 3.9e-06 56.6 68 44.1
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 3.9e-06 56.6 53 50.9


User provided reference genes

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