Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A573T76 Lonicera japonica HOM05D000921 ORTHO05D002852 2.8e-13 77.4 40 100.0
MBI04_g43159_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 1.7e-10 68.2 39 82.1
DCAR_006882 Daucus carota HOM05D000921 ORTHO05D002852 2.2e-10 67.8 39 82.1
arahy.Tifrunner.gnm1.ann1.4FT79Q Arachis hypogaea HOM05D000921 ORTHO05D002852 2.9e-10 67.4 39 79.5
MELO3C006169.2 Cucumis melo HOM05D000921 ORTHO05D002852 2.9e-10 67.4 39 82.1
CsaV3_3G009490 Cucumis sativus L. HOM05D000921 ORTHO05D002852 2.9e-10 67.4 39 82.1
Cpa.g.sc18.150 Carica papaya HOM05D000921 ORTHO05D002852 3.7e-10 67.0 40 85.0
CiPaw.02G165500 Carya illinoinensis HOM05D000921 ORTHO05D002852 3.7e-10 67.0 39 84.6
Dinv32396 Davidia involucrata HOM05D000921 ORTHO05D002852 3.7e-10 67.0 39 84.6
Gorai.004G155500 Gossypium raimondii HOM05D000921 ORTHO05D002852 4.9e-10 66.6 40 80.0
COL.COLO4_12586 Corchorus olitorius HOM05D000921 ORTHO05D002852 8.3e-10 65.9 39 82.1
Haze_16736 Corylus avellana HOM05D000921 ORTHO05D002852 8.3e-10 65.9 39 82.1
Dinv43732 Davidia involucrata HOM05D000921 ORTHO05D002852 8.3e-10 65.9 39 82.1
Gohir.A11G082900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 8.3e-10 65.9 39 82.1
Nitab4.5_0002436g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 8.3e-10 65.9 39 82.1
QL08p051741 Quercus lobata HOM05D000921 ORTHO05D002852 8.3e-10 65.9 39 82.1
Sed0001143 Sechium edule HOM05D000921 ORTHO05D002852 8.3e-10 65.9 39 79.5
ClCG05G002030 Citrullus lanatus HOM05D000921 ORTHO05D002852 1.1e-09 65.5 37 83.8
Ciclev10018468m.g Citrus clementina HOM05D000921 ORTHO05D002852 1.1e-09 65.5 39 79.5
Lsat_1_v5_gn_7_7601 Lactuca sativa HOM05D000921 ORTHO05D002852 1.1e-09 65.5 39 74.4
Manes.05G043300 Manihot esculenta HOM05D000921 ORTHO05D002852 1.1e-09 65.5 39 82.1
Gohir.A08G128400 Gossypium hirsutum HOM05D000921 ORTHO05D002852 1.4e-09 65.1 39 76.9
Lj7C526G8 Lonicera japonica HOM05D000921 ORTHO05D002852 1.4e-09 65.1 39 79.5
Lj3g0001885 Lotus japonicus HOM05D000921 ORTHO05D002852 1.4e-09 65.1 39 79.5
Phvul.008G074600 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 1.4e-09 65.1 39 79.5
VMungo1383G3171 Vigna mungo HOM05D000921 ORTHO05D002852 1.4e-09 65.1 39 79.5
Atru.chr5.339 Acer truncatum HOM05D000921 ORTHO05D002852 1.8e-09 64.7 39 79.5
PSO478G4503 Papaver somniferum HOM05D000921 ORTHO05D002852 1.8e-09 64.7 39 76.9
PSO782G1119 Papaver somniferum HOM05D000921 ORTHO05D002852 1.8e-09 64.7 39 76.9
Sed0009254 Sechium edule HOM05D000921 ORTHO05D002852 1.8e-09 64.7 39 76.9
Solyc01g094060.4 Solanum lycopersicum HOM05D000921 ORTHO05D002852 1.8e-09 64.7 39 79.5
Sopen01g037870 Solanum pennellii HOM05D000921 ORTHO05D002852 1.8e-09 64.7 39 79.5
CANSAT56G4522 Cannabis sativa HOM05D000921 ORTHO05D002852 2.4e-09 64.3 39 79.5
Gohir.D11G087000 Gossypium hirsutum HOM05D000921 ORTHO05D002852 2.4e-09 64.3 39 79.5
Gorai.007G092900 Gossypium raimondii HOM05D000921 ORTHO05D002852 2.4e-09 64.3 39 79.5
Lalb_Chr07g0189601 Lupinus albus HOM05D000921 ORTHO05D002852 2.4e-09 64.3 39 79.5
Nitab4.5_0005340g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 2.4e-09 64.3 38 81.6
Glyma.03G021400 Glycine max HOM05D000921 ORTHO05D002852 3.2e-09 63.9 39 79.5
Glyma.09G267100 Glycine max HOM05D000921 ORTHO05D002852 3.2e-09 63.9 39 79.5
Glyma.18G223300 Glycine max HOM05D000921 ORTHO05D002852 3.2e-09 63.9 39 79.5
Nn6g34350 Nelumbo nucifera HOM05D000921 ORTHO05D002852 3.2e-09 63.9 39 74.4
Psat4g150320 Pisum sativum HOM05D000921 ORTHO05D002852 3.2e-09 63.9 39 76.9
Actinidia09569 Actinidia chinensis HOM05D000921 ORTHO05D002852 4.1e-09 63.5 39 79.5
Phvul.010G048900 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 4.1e-09 63.5 39 76.9
Actinidia31438 Actinidia chinensis HOM05D000921 ORTHO05D002852 5.4e-09 63.2 39 79.5
TPR.G28301 Trifolium pratense HOM05D000921 ORTHO05D002852 5.4e-09 63.2 39 76.9
CDE11G0537 Ceratophyllum demersum HOM05D000921 ORTHO05D002852 7.0e-09 62.8 39 71.8
AUR62013603 Chenopodium quinoa HOM05D000921 ORTHO05D002852 7.0e-09 62.8 39 76.9
Ca_23831_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 7.0e-09 62.8 39 76.9
Os04g0555500 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D002852 7.0e-09 62.8 39 71.8
Thecc.01G372900 Theobroma cacao HOM05D000921 ORTHO05D002852 7.0e-09 62.8 39 79.5
GSVIVG01027547001 Vitis vinifera HOM05D000921 ORTHO05D002852 7.0e-09 62.8 39 76.9
EL10Ac1g00924 Beta vulgaris HOM05D000921 ORTHO05D002852 9.2e-09 62.4 39 74.4
Migut.F01430 Erythranthe guttata HOM05D000921 ORTHO05D002852 9.2e-09 62.4 39 74.4
HanXRQChr04g0122231 Helianthus annuus HOM05D000921 ORTHO05D002852 9.2e-09 62.4 39 74.4
Lsat_1_v5_gn_3_135480 Lactuca sativa HOM05D000921 ORTHO05D002852 9.2e-09 62.4 37 78.4
Lalb_Chr01g0021281 Lupinus albus HOM05D000921 ORTHO05D002852 9.2e-09 62.4 39 76.9
MBI12_g38016_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 9.2e-09 62.4 38 78.9
Medtr8g035750 Medicago truncatula HOM05D000921 ORTHO05D002852 9.2e-09 62.4 39 74.4
SGA_v2.0_scaffold303G47875 Striga asiatica HOM05D000921 ORTHO05D002852 9.2e-09 62.4 39 71.8
TWI14G1087 Tripterygium wilfordii HOM05D000921 ORTHO05D002852 9.2e-09 62.4 39 76.9
ECA240G3430 Erigeron canadensis HOM05D000921 ORTHO05D002852 1.2e-08 62.0 38 76.3
Eucgr.E01352 Eucalyptus grandis HOM05D000921 ORTHO05D002852 1.2e-08 62.0 39 74.4
LjContig00136g0027596 Lotus japonicus HOM05D000921 ORTHO05D002852 1.2e-08 62.0 39 74.4
Potri.014G072600 Populus trichocarpa HOM05D000921 ORTHO05D002852 1.2e-08 62.0 39 76.9
TAR636G1827 Trochodendron aralioides HOM05D000921 ORTHO05D002852 1.2e-08 62.0 39 74.4
VMungo0331G0396 Vigna mungo HOM05D000921 ORTHO05D002852 1.2e-08 62.0 39 74.4
Zm00001eb074430 Zea mays HOM05D000921 ORTHO05D002852 1.2e-08 62.0 39 71.8
DCAR_025120 Daucus carota HOM05D000921 ORTHO05D002852 1.6e-08 61.6 39 74.4
THA.LOC104801996 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 1.6e-08 61.6 39 74.4
Ah.05g175310 Amaranthus hybridus HOM05D000921 ORTHO05D002852 2.0e-08 61.2 37 78.4
SEGI_07876 Sequoiadendron giganteum HOM05D000921 ORTHO05D002852 2.0e-08 61.2 39 69.2
Aqoxy7G00539 Aquilegia oxysepala HOM05D000921 ORTHO05D002852 2.7e-08 60.8 39 71.8
CSS0003914 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D002852 2.7e-08 60.8 36 77.8
Carub.0005s2767 Capsella rubella HOM05D000921 ORTHO05D002852 2.7e-08 60.8 39 74.4
Potri.002G150000 Populus trichocarpa HOM05D000921 ORTHO05D002852 2.7e-08 60.8 39 74.4
CARHR140720 Cardamine hirsuta HOM05D000921 ORTHO05D002852 3.5e-08 60.5 39 74.4
Cc02_g36420 Coffea canephora HOM05D000921 ORTHO05D002852 3.5e-08 60.5 39 74.4
Gohir.A08G031900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.5e-08 60.5 39 74.4
Gohir.D08G042866 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.5e-08 60.5 39 74.4
Gohir.D08G042932 Gossypium hirsutum HOM05D000921 ORTHO05D002852 3.5e-08 60.5 39 74.4
Gorai.004G041500 Gossypium raimondii HOM05D000921 ORTHO05D002852 3.5e-08 60.5 39 74.4
Sp4g27560 Schrenkiella parvula HOM05D000921 ORTHO05D002852 3.5e-08 60.5 39 74.4
AL4G44720 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 4.6e-08 60.1 39 74.4
AT2G45540 Arabidopsis thaliana HOM05D000921 ORTHO05D002852 4.6e-08 60.1 39 74.4
A05p05550 Brassica napus HOM05D000921 ORTHO05D002852 4.6e-08 60.1 39 74.4
BolC4t22272H Brassica oleracea HOM05D000921 ORTHO05D002852 4.6e-08 60.1 39 74.4
BraA05t19525Z Brassica rapa HOM05D000921 ORTHO05D002852 4.6e-08 60.1 39 74.4
TPR.G37773 Trifolium pratense HOM05D000921 ORTHO05D002852 4.6e-08 60.1 39 71.8
BcaC07g42649 Brassica carinata HOM05D000921 ORTHO05D002852 5.9e-08 59.7 39 71.8
Pp3c8_11180 Physcomitrium patens HOM05D000921 ORTHO05D002852 5.9e-08 59.7 37 73.0
Prupe.2G149000 Prunus persica HOM05D000921 ORTHO05D002852 5.9e-08 59.7 39 74.4
unitig_22.g5374 Utricularia gibba HOM05D000921 ORTHO05D002852 5.9e-08 59.7 39 71.8
ATR0757G137 Amborella trichopoda HOM05D000921 ORTHO05D002852 7.8e-08 59.3 39 66.7
ECA236G3038 Erigeron canadensis HOM05D000921 ORTHO05D002852 7.8e-08 59.3 39 69.2
Medtr7g075660 Medicago truncatula HOM05D000921 ORTHO05D002852 7.8e-08 59.3 39 71.8
Psat3g104040 Pisum sativum HOM05D000921 ORTHO05D002852 7.8e-08 59.3 39 71.8
RcHm_v2.0_Chr1g0351141 Rosa chinensis HOM05D000921 ORTHO05D002852 7.8e-08 59.3 39 71.8
SMO347G0262 Selaginella moellendorffii HOM05D000921 ORTHO05D002852 1.0e-07 58.9 39 61.5
BolC8t51174H Brassica oleracea HOM05D000921 ORTHO05D002852 1.3e-07 58.5 39 69.2
FvH4_7g12350 Fragaria vesca HOM05D000921 ORTHO05D002852 1.3e-07 58.5 39 69.2
FAN01G1835 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.3e-07 58.5 39 69.2
FAN03G0226 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.3e-07 58.5 39 69.2
FAN06G2098 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.3e-07 58.5 39 69.2
FAN06G4917 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.3e-07 58.5 39 69.2
FAN10G3046 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.3e-07 58.5 39 69.2
Pp3c25_6190 Physcomitrium patens HOM05D000921 ORTHO05D002852 1.3e-07 58.5 37 70.3
Aa31LG1G27030 Aethionema arabicum HOM05D000921 ORTHO05D002852 1.7e-07 58.2 38 73.7
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 1.7e-07 58.2 37 75.7
Ca_07837_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 2.3e-07 57.8 39 69.2
Mapoly0056s0137 Marchantia polymorpha HOM05D000921 ORTHO05D002852 2.3e-07 57.8 37 67.6
Nn1g01159 Nelumbo nucifera HOM05D000921 ORTHO05D002852 2.3e-07 57.8 39 64.1
Sc26g0001150 Simmondsia chinensis HOM05D000921 ORTHO05D002852 2.3e-07 57.8 39 66.7
THA.LOC104827617 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 2.3e-07 57.8 39 66.7
A09p53140 Brassica napus HOM05D000921 ORTHO05D002852 3.9e-07 57.0 39 66.7
BraA09t40739Z Brassica rapa HOM05D000921 ORTHO05D002852 3.9e-07 57.0 39 66.7
Thhalv10001277m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 3.9e-07 57.0 39 71.8
Thhalv10005733m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 3.9e-07 57.0 39 69.2
FAN10G3969 Fragaria x ananassa HOM05D000921 ORTHO05D002852 5.0e-07 56.6 37 70.3
HanXRQChr03g0093641 Helianthus annuus HOM05D000921 ORTHO05D002852 8.6e-07 55.8 38 68.4
A04p01340 Brassica napus HOM05D000921 ORTHO05D002852 1.1e-06 55.5 39 69.2
C04p31670 Brassica napus HOM05D000921 ORTHO05D002852 1.1e-06 55.5 39 69.2
BolC4t24715H Brassica oleracea HOM05D000921 ORTHO05D002852 1.1e-06 55.5 39 69.2
BraA04t15853Z Brassica rapa HOM05D000921 ORTHO05D002852 1.1e-06 55.5 39 69.2
CARHR171310 Cardamine hirsuta HOM05D000921 ORTHO05D002852 1.1e-06 55.5 39 66.7
Sp5g02330 Schrenkiella parvula HOM05D000921 ORTHO05D002852 1.1e-06 55.5 39 69.2
Zm00001eb249850 Zea mays HOM05D000921 ORTHO05D002852 1.1e-06 55.5 39 64.1
AagrBONN_evm.TU.Sc2ySwM_117.767 Anthoceros agrestis HOM05D000921 ORTHO05D002852 1.5e-06 55.1 37 62.2
BcaC07g40611 Brassica carinata HOM05D000921 ORTHO05D002852 1.5e-06 55.1 39 64.1
C08p35860 Brassica napus HOM05D000921 ORTHO05D002852 1.5e-06 55.1 39 64.1
AL5G43240 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 1.9e-06 54.7 39 66.7
Pp3c16_14330 Physcomitrium patens HOM05D000921 ORTHO05D002852 3.3e-06 53.9 37 64.9
Aa31LG10G15130 Aethionema arabicum HOM05D000921 ORTHO05D002852 4.3e-06 53.5 39 64.1
HPP92_009981 Vanilla planifolia HOM05D000921 ORTHO05D002852 4.3e-06 53.5 39 61.5
BcaC02g10197 Brassica carinata HOM05D000921 ORTHO05D002852 9.5e-06 52.4 37 67.6


User provided reference genes

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