Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A523T55 Lonicera japonica HOM05D002498 ORTHO05D002553 1.3e-55 219.5 115 100.0
Duzib192G0999 Durio zibethinus HOM05D002498 ORTHO05D002553 1.3e-18 96.7 73 69.9
Hma1.2p1_0291F.1_g115140 Hydrangea macrophylla HOM05D002498 ORTHO05D002553 3.7e-18 95.1 74 68.9
Gohir.D10G055000 Gossypium hirsutum HOM05D002498 ORTHO05D002553 1.1e-17 93.6 71 71.8
Gorai.011G058700 Gossypium raimondii HOM05D002498 ORTHO05D002553 1.1e-17 93.6 71 71.8
COL.COLO4_30763 Corchorus olitorius HOM05D002498 ORTHO05D002553 1.4e-17 93.2 72 66.7
Dinv30674 Davidia involucrata HOM05D002498 ORTHO05D002553 1.4e-17 93.2 72 72.2
Dinv34334 Davidia involucrata HOM05D002498 ORTHO05D002553 1.4e-17 93.2 72 72.2
Gohir.A10G053200 Gossypium hirsutum HOM05D002498 ORTHO05D002553 1.8e-17 92.8 71 71.8
Manes.11G020700 Manihot esculenta HOM05D002498 ORTHO05D002553 2.4e-17 92.4 74 67.6
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 3.1e-17 92.0 72 69.4
Thecc.06G119300 Theobroma cacao HOM05D002498 ORTHO05D002553 3.1e-17 92.0 72 68.1
Duzib235G0745 Durio zibethinus HOM05D002498 ORTHO05D002553 5.3e-17 91.3 72 70.8
Gohir.A06G193600 Gossypium hirsutum HOM05D002498 ORTHO05D002553 6.9e-17 90.9 72 68.1
Cpa.g.sc25.113 Carica papaya HOM05D002498 ORTHO05D002553 9.0e-17 90.5 74 67.6
Hma1.2p1_0496F.1_g166220 Hydrangea macrophylla HOM05D002498 ORTHO05D002553 9.0e-17 90.5 73 69.9
vmacro22041 Vaccinium macrocarpon HOM05D002498 ORTHO05D002553 2.6e-16 89.0 72 68.1
RcHm_v2.0_Chr2g0145171 Rosa chinensis HOM05D002498 ORTHO05D002553 4.5e-16 88.2 72 69.4
Actinidia26030 Actinidia chinensis HOM05D002498 ORTHO05D002553 7.7e-16 87.4 71 67.6
Potri.001G169900 Populus trichocarpa HOM05D002498 ORTHO05D002553 7.7e-16 87.4 71 67.6
Rhsim12G0209700 Rhododendron simsii HOM05D002498 ORTHO05D002553 7.7e-16 87.4 72 66.7
FvH4_6g34640 Fragaria vesca HOM05D002498 ORTHO05D002553 1.0e-15 87.0 72 68.1
FAN09G3304 Fragaria x ananassa HOM05D002498 ORTHO05D002553 1.0e-15 87.0 72 68.1
FAN14G0943 Fragaria x ananassa HOM05D002498 ORTHO05D002553 1.0e-15 87.0 72 68.1
Potri.003G064100 Populus trichocarpa HOM05D002498 ORTHO05D002553 1.7e-15 86.3 71 67.6
Actinidia37365 Actinidia chinensis HOM05D002498 ORTHO05D002553 2.9e-15 85.5 72 65.3
Actinidia39082 Actinidia chinensis HOM05D002498 ORTHO05D002553 2.9e-15 85.5 72 65.3
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.9e-15 85.5 72 66.7
FAN05G3736 Fragaria x ananassa HOM05D002498 ORTHO05D002553 2.9e-15 85.5 72 66.7
MD09G1184100 Malus domestica HOM05D002498 ORTHO05D002553 2.9e-15 85.5 72 66.7
QL05p007807 Quercus lobata HOM05D002498 ORTHO05D002553 2.9e-15 85.5 72 62.5
EL10Ac4g09793 Beta vulgaris HOM05D002498 ORTHO05D002553 6.5e-15 84.3 72 65.3
CANSAT56G2749 Cannabis sativa HOM05D002498 ORTHO05D002553 8.5e-15 84.0 73 58.9
Gorai.010G235100 Gossypium raimondii HOM05D002498 ORTHO05D002553 1.9e-14 82.8 80 61.2
Gohir.D06G201400 Gossypium hirsutum HOM05D002498 ORTHO05D002553 2.5e-14 82.4 80 61.2
CSS0029074 Camellia sinensis var. sinensis HOM05D002498 ORTHO05D002553 3.2e-14 82.0 73 67.1
CSS0031655 Camellia sinensis var. sinensis HOM05D002498 ORTHO05D002553 3.2e-14 82.0 73 67.1
Prupe.3G042400 Prunus persica HOM05D002498 ORTHO05D002553 3.2e-14 82.0 72 68.1
MBI14_g32128_MAGBIO Magnolia biondii HOM05D002498 ORTHO05D002553 4.2e-14 81.6 72 62.5
MD17G1168400 Malus domestica HOM05D002498 ORTHO05D002553 4.2e-14 81.6 72 63.9
Sabra01G0141600 Salix brachista HOM05D002498 ORTHO05D002553 4.2e-14 81.6 71 63.4
AUR62000647 Chenopodium quinoa HOM05D002498 ORTHO05D002553 7.2e-14 80.9 72 62.5
Sabra03G0037900 Salix brachista HOM05D002498 ORTHO05D002553 7.2e-14 80.9 78 64.1
Sed0015077 Sechium edule HOM05D002498 ORTHO05D002553 1.6e-13 79.7 73 61.6
Psat4g182480 Pisum sativum HOM05D002498 ORTHO05D002553 6.1e-13 77.8 72 61.1
CsaV3_7G034500 Cucumis sativus L. HOM05D002498 ORTHO05D002553 7.9e-13 77.4 73 60.3
GSVIVG01016770001 Vitis vinifera HOM05D002498 ORTHO05D002553 1.0e-12 77.0 76 64.5
TAR633G2028 Trochodendron aralioides HOM05D002498 ORTHO05D002553 1.4e-12 76.6 72 56.9
Lalb_Chr01g0013581 Lupinus albus HOM05D002498 ORTHO05D002553 1.8e-12 76.3 72 62.5
arahy.Tifrunner.gnm1.ann1.U78AI9 Arachis hypogaea HOM05D002498 ORTHO05D002553 5.1e-12 74.7 71 57.7
arahy.Tifrunner.gnm1.ann1.T5SCHP Arachis hypogaea HOM05D002498 ORTHO05D002553 6.7e-12 74.3 70 58.6
CARHR018030 Cardamine hirsuta HOM05D002498 ORTHO05D002553 6.7e-12 74.3 71 59.2
Eucgr.F03174 Eucalyptus grandis HOM05D002498 ORTHO05D002553 1.5e-11 73.2 72 55.6
AT1G17440 Arabidopsis thaliana HOM05D002498 ORTHO05D002553 2.0e-11 72.8 71 57.7
Thhalv10006997m.g Eutrema salsugineum HOM05D002498 ORTHO05D002553 2.0e-11 72.8 71 56.3
AL1G29720 Arabidopsis lyrata HOM05D002498 ORTHO05D002553 3.3e-11 72.0 71 56.3
A06p13370 Brassica napus HOM05D002498 ORTHO05D002553 3.3e-11 72.0 71 59.2
BraA06t24489Z Brassica rapa HOM05D002498 ORTHO05D002553 3.3e-11 72.0 71 59.2
Sc12g0010550 Simmondsia chinensis HOM05D002498 ORTHO05D002553 3.3e-11 72.0 73 56.2
Carub.0001s1720 Capsella rubella HOM05D002498 ORTHO05D002553 4.3e-11 71.6 72 55.6
Aqoxy1G00838 Aquilegia oxysepala HOM05D002498 ORTHO05D002553 5.7e-11 71.2 72 55.6
Ciclev10025234m.g Citrus clementina HOM05D002498 ORTHO05D002553 5.7e-11 71.2 72 59.7
Sp1g15580 Schrenkiella parvula HOM05D002498 ORTHO05D002553 7.4e-11 70.9 71 56.3
Phvul.010G130700 Phaseolus vulgaris HOM05D002498 ORTHO05D002553 9.7e-11 70.5 75 56.0
C05p15830 Brassica napus HOM05D002498 ORTHO05D002553 1.3e-10 70.1 71 57.7
BolC5t30289H Brassica oleracea HOM05D002498 ORTHO05D002553 1.3e-10 70.1 71 57.7
Lj3g0023911 Lotus japonicus HOM05D002498 ORTHO05D002553 1.7e-10 69.7 71 56.3
Medtr8g020480 Medicago truncatula HOM05D002498 ORTHO05D002553 2.2e-10 69.3 72 54.2
Manes.04G144200 Manihot esculenta HOM05D002498 ORTHO05D002553 3.7e-10 68.6 78 60.3
Lalb_Chr04g0263441 Lupinus albus HOM05D002498 ORTHO05D002553 4.8e-10 68.2 72 56.9
PGSC0003DMG400002568 Solanum tuberosum HOM05D002498 ORTHO05D002553 8.2e-10 67.4 74 58.1
Glyma.07G037600 Glycine max HOM05D002498 ORTHO05D002553 1.4e-09 66.6 73 54.8
VMungo0331G0210 Vigna mungo HOM05D002498 ORTHO05D002553 1.4e-09 66.6 73 53.4
Nitab4.5_0002072g0070 Nicotiana tabacum HOM05D002498 ORTHO05D002553 1.8e-09 66.2 74 58.1
CAN.G862.29 Capsicum annuum HOM05D002498 ORTHO05D002553 2.4e-09 65.9 73 52.1
THA.LOC104808053 Tarenaya hassleriana HOM05D002498 ORTHO05D002553 2.4e-09 65.9 73 49.3
THA.LOC104813958 Tarenaya hassleriana HOM05D002498 ORTHO05D002553 2.4e-09 65.9 72 54.2
Nitab4.5_0012529g0010 Nicotiana tabacum HOM05D002498 ORTHO05D002553 4.1e-09 65.1 73 53.4
Peaxi162Scf00038g01936 Petunia axillaris HOM05D002498 ORTHO05D002553 4.1e-09 65.1 74 56.8
TPR.G32477 Trifolium pratense HOM05D002498 ORTHO05D002553 4.1e-09 65.1 69 53.6
Migut.I01070 Erythranthe guttata HOM05D002498 ORTHO05D002553 6.9e-09 64.3 71 56.3
Solyc03g122020.4 Solanum lycopersicum HOM05D002498 ORTHO05D002553 6.9e-09 64.3 74 56.8
Sopen03g040820 Solanum pennellii HOM05D002498 ORTHO05D002553 6.9e-09 64.3 74 56.8
Hund07159 Selenicereus undatus HOM05D002498 ORTHO05D002553 2.6e-08 62.4 62 59.7
PSO339G1709 Papaver somniferum HOM05D002498 ORTHO05D002553 2.9e-07 58.9 73 47.9
PSO384G1420 Papaver somniferum HOM05D002498 ORTHO05D002553 6.5e-07 57.8 73 46.6
DCAR_016127 Daucus carota HOM05D002498 ORTHO05D002553 1.1e-06 57.0 60 58.3
SGA_v2.0_scaffold71G23856 Striga asiatica HOM05D002498 ORTHO05D002553 5.5e-06 54.7 71 47.9
A09p60370 Brassica napus HOM05D002498 ORTHO05D002553 7.2e-06 54.3 73 47.9


User provided reference genes

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