Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A432T73 Lonicera japonica HOM05D004216 ORTHO05D004926 3.9e-44 181.0 88 100.0
Dinv38590 Davidia involucrata HOM05D004216 ORTHO05D004926 5.8e-32 140.6 85 81.2
Nn4g23713 Nelumbo nucifera HOM05D004216 ORTHO05D004926 1.7e-31 139.0 85 78.8
Cc04_g07550 Coffea canephora HOM05D004216 ORTHO05D004926 8.4e-31 136.7 85 80.0
Peaxi162Scf00015g00072 Petunia axillaris HOM05D004216 ORTHO05D004926 1.4e-30 136.0 85 78.8
CSS0006085 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 2.5e-30 135.2 85 76.5
CSS0012337 Camellia sinensis var. sinensis HOM05D004216 ORTHO05D004926 2.5e-30 135.2 85 76.5
Nitab4.5_0000410g0130 Nicotiana tabacum HOM05D004216 ORTHO05D004926 3.2e-30 134.8 85 77.6
Nitab4.5_0001599g0210 Nicotiana tabacum HOM05D004216 ORTHO05D004926 3.2e-30 134.8 85 77.6
Migut.J01004 Erythranthe guttata HOM05D004216 ORTHO05D004926 7.1e-30 133.7 85 77.6
Hma1.2p1_0595F.1_g186000 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 7.1e-30 133.7 85 78.8
Hma1.2p1_0595F.1_g186010 Hydrangea macrophylla HOM05D004216 ORTHO05D004926 7.1e-30 133.7 85 78.8
Lsat_1_v5_gn_5_25060 Lactuca sativa HOM05D004216 ORTHO05D004926 1.2e-29 132.9 89 75.3
HPP92_023454 Vanilla planifolia HOM05D004216 ORTHO05D004926 1.6e-29 132.5 85 74.1
HPP92_023478 Vanilla planifolia HOM05D004216 ORTHO05D004926 1.6e-29 132.5 85 74.1
MSTRG.5865 Avicennia marina HOM05D004216 ORTHO05D004926 2.1e-29 132.1 85 76.5
FAN08G0408 Fragaria x ananassa HOM05D004216 ORTHO05D004926 2.1e-29 132.1 89 75.3
HanXRQChr05g0153841 Helianthus annuus HOM05D004216 ORTHO05D004926 2.1e-29 132.1 85 76.5
SalBow3G4568 Salvia bowleyana HOM05D004216 ORTHO05D004926 2.1e-29 132.1 81 80.2
ECA246G5151 Erigeron canadensis HOM05D004216 ORTHO05D004926 3.5e-29 131.3 89 74.2
Glyma.05G013400 Glycine max HOM05D004216 ORTHO05D004926 3.5e-29 131.3 89 74.2
Lalb_Chr12g0197541 Lupinus albus HOM05D004216 ORTHO05D004926 3.5e-29 131.3 89 75.3
TAR371G0728 Trochodendron aralioides HOM05D004216 ORTHO05D004926 3.5e-29 131.3 85 76.5
DCAR_001432 Daucus carota HOM05D004216 ORTHO05D004926 4.6e-29 131.0 89 75.3
Glyma.17G121600 Glycine max HOM05D004216 ORTHO05D004926 4.6e-29 131.0 89 73.0
FvH4_5g12730 Fragaria vesca HOM05D004216 ORTHO05D004926 6.0e-29 130.6 89 74.2
FAN04G0815 Fragaria x ananassa HOM05D004216 ORTHO05D004926 6.0e-29 130.6 89 74.2
FAN13G0239 Fragaria x ananassa HOM05D004216 ORTHO05D004926 6.0e-29 130.6 89 74.2
FAN18G1390 Fragaria x ananassa HOM05D004216 ORTHO05D004926 6.0e-29 130.6 89 74.2
FAN18G2177 Fragaria x ananassa HOM05D004216 ORTHO05D004926 6.0e-29 130.6 89 74.2
GSVIVG01008230001 Vitis vinifera HOM05D004216 ORTHO05D004926 6.0e-29 130.6 86 77.9
EL10Ac5g11246 Beta vulgaris HOM05D004216 ORTHO05D004926 1.0e-28 129.8 85 72.9
Actinidia31032 Actinidia chinensis HOM05D004216 ORTHO05D004926 1.3e-28 129.4 85 74.1
RcHm_v2.0_Chr7g0184581 Rosa chinensis HOM05D004216 ORTHO05D004926 1.3e-28 129.4 89 73.0
Ciclev10018514m.g Citrus clementina HOM05D004216 ORTHO05D004926 1.8e-28 129.0 89 73.0
Duzib205G0916 Durio zibethinus HOM05D004216 ORTHO05D004926 1.8e-28 129.0 85 72.9
Prupe.5G217000 Prunus persica HOM05D004216 ORTHO05D004926 1.8e-28 129.0 89 74.2
QL10p022943 Quercus lobata HOM05D004216 ORTHO05D004926 1.8e-28 129.0 89 74.2
AUR62032188 Chenopodium quinoa HOM05D004216 ORTHO05D004926 2.3e-28 128.6 85 72.9
AUR62036947 Chenopodium quinoa HOM05D004216 ORTHO05D004926 2.3e-28 128.6 85 72.9
MD06G1211000 Malus domestica HOM05D004216 ORTHO05D004926 2.3e-28 128.6 89 73.0
Sc10g0009590 Simmondsia chinensis HOM05D004216 ORTHO05D004926 2.3e-28 128.6 89 73.0
Cfa019828 Carpinus fangiana HOM05D004216 ORTHO05D004926 3.0e-28 128.3 89 75.3
CiPaw.15G126300 Carya illinoinensis HOM05D004216 ORTHO05D004926 3.0e-28 128.3 89 74.2
PSO017G0533 Papaver somniferum HOM05D004216 ORTHO05D004926 3.0e-28 128.3 85 70.6
PSO478G4514 Papaver somniferum HOM05D004216 ORTHO05D004926 3.0e-28 128.3 85 70.6
Hund02527 Selenicereus undatus HOM05D004216 ORTHO05D004926 3.9e-28 127.9 85 72.9
Ah.11g047140 Amaranthus hybridus HOM05D004216 ORTHO05D004926 5.1e-28 127.5 85 68.2
Cpa.g.sc1020.1 Carica papaya HOM05D004216 ORTHO05D004926 5.1e-28 127.5 89 69.7
CDE05G2534 Ceratophyllum demersum HOM05D004216 ORTHO05D004926 5.1e-28 127.5 85 72.9
SGA_v2.0_scaffold13G06699 Striga asiatica HOM05D004216 ORTHO05D004926 5.1e-28 127.5 85 72.9
Solyc03g119780.4 Solanum lycopersicum HOM05D004216 ORTHO05D004926 6.7e-28 127.1 85 72.9
Sopen03g038630 Solanum pennellii HOM05D004216 ORTHO05D004926 6.7e-28 127.1 85 72.9
VMungo1215G1362 Vigna mungo HOM05D004216 ORTHO05D004926 8.7e-28 126.7 85 71.8
ATR0564G329 Amborella trichopoda HOM05D004216 ORTHO05D004926 1.1e-27 126.3 85 72.9
TPR.G26791 Trifolium pratense HOM05D004216 ORTHO05D004926 1.9e-27 125.6 89 69.7
Aqoxy3G03901 Aquilegia oxysepala HOM05D004216 ORTHO05D004926 2.5e-27 125.2 85 70.6
Lj4g0001448 Lotus japonicus HOM05D004216 ORTHO05D004926 2.5e-27 125.2 89 71.9
Psat4g043600 Pisum sativum HOM05D004216 ORTHO05D004926 2.5e-27 125.2 89 70.8
Thecc.03G027900 Theobroma cacao HOM05D004216 ORTHO05D004926 2.5e-27 125.2 89 69.7
arahy.Tifrunner.gnm1.ann1.868KN4 Arachis hypogaea HOM05D004216 ORTHO05D004926 3.3e-27 124.8 89 69.7
arahy.Tifrunner.gnm1.ann1.CB5LZE Arachis hypogaea HOM05D004216 ORTHO05D004926 3.3e-27 124.8 89 69.7
Oeu004769.3 Olea europaea HOM05D004216 ORTHO05D004926 3.3e-27 124.8 89 69.7
Ca_02536_v3 Cicer arietinum L. HOM05D004216 ORTHO05D004926 7.4e-27 123.6 89 69.7
AT1G73960 Arabidopsis thaliana HOM05D004216 ORTHO05D004926 9.6e-27 123.2 81 72.8
CAN.G438.113 Capsicum annuum HOM05D004216 ORTHO05D004926 1.3e-26 122.9 85 69.4
TWI81G0292 Tripterygium wilfordii HOM05D004216 ORTHO05D004926 1.3e-26 122.9 89 68.5
CANSAT80G0956 Cannabis sativa HOM05D004216 ORTHO05D004926 1.6e-26 122.5 89 71.9
CARHR067070 Cardamine hirsuta HOM05D004216 ORTHO05D004926 1.6e-26 122.5 85 68.2
Thhalv10018013m.g Eutrema salsugineum HOM05D004216 ORTHO05D004926 1.6e-26 122.5 85 68.2
Sp5g29160 Schrenkiella parvula HOM05D004216 ORTHO05D004926 1.6e-26 122.5 85 69.4
AL2G33790 Arabidopsis lyrata HOM05D004216 ORTHO05D004926 2.1e-26 122.1 81 71.6
Gohir.A07G038732 Gossypium hirsutum HOM05D004216 ORTHO05D004926 2.1e-26 122.1 89 67.4
Gohir.D07G042820 Gossypium hirsutum HOM05D004216 ORTHO05D004926 2.1e-26 122.1 89 67.4
Gorai.001G045800 Gossypium raimondii HOM05D004216 ORTHO05D004926 2.1e-26 122.1 89 67.4
Potri.015G050800 Populus trichocarpa HOM05D004216 ORTHO05D004926 2.1e-26 122.1 85 65.9
THA.LOC104812129 Tarenaya hassleriana HOM05D004216 ORTHO05D004926 2.1e-26 122.1 85 67.1
Carub.0002s2073 Capsella rubella HOM05D004216 ORTHO05D004926 4.8e-26 120.9 85 68.2
ClCG04G011280 Citrullus lanatus HOM05D004216 ORTHO05D004926 4.8e-26 120.9 81 71.6
MELO3C002074.2 Cucumis melo HOM05D004216 ORTHO05D004926 4.8e-26 120.9 81 71.6
CsaV3_1G006480 Cucumis sativus L. HOM05D004216 ORTHO05D004926 4.8e-26 120.9 81 71.6
Sed0006394 Sechium edule HOM05D004216 ORTHO05D004926 4.8e-26 120.9 89 68.5
Aa31LG4G4250 Aethionema arabicum HOM05D004216 ORTHO05D004926 6.2e-26 120.6 81 70.4
Manes.05G119100 Manihot esculenta HOM05D004216 ORTHO05D004926 8.2e-26 120.2 89 66.3
Rhsim08G0138000 Rhododendron simsii HOM05D004216 ORTHO05D004926 8.2e-26 120.2 85 67.1
A07p39800 Brassica napus HOM05D004216 ORTHO05D004926 1.1e-25 119.8 85 65.9
C06p48070 Brassica napus HOM05D004216 ORTHO05D004926 1.1e-25 119.8 85 65.9
BolC6t39842H Brassica oleracea HOM05D004216 ORTHO05D004926 1.1e-25 119.8 85 65.9
BraA07t31527Z Brassica rapa HOM05D004216 ORTHO05D004926 1.1e-25 119.8 85 65.9
Eucgr.K02653 Eucalyptus grandis HOM05D004216 ORTHO05D004926 1.1e-25 119.8 89 66.3
Zm00001eb312360 Zea mays HOM05D004216 ORTHO05D004926 2.0e-24 115.5 81 69.1
SEGI_21625 Sequoiadendron giganteum HOM05D004216 ORTHO05D004926 2.6e-24 115.2 81 67.9
SEGI_35421 Sequoiadendron giganteum HOM05D004216 ORTHO05D004926 2.6e-24 115.2 81 67.9
PGR044G2306 Punica granatum HOM05D004216 ORTHO05D004926 3.8e-23 111.3 85 63.5
Pp3c18_6100 Physcomitrium patens HOM05D004216 ORTHO05D004926 1.9e-22 109.0 81 65.4
Mapoly0014s0115 Marchantia polymorpha HOM05D004216 ORTHO05D004926 3.5e-21 104.8 85 58.8
Pp3c21_15920 Physcomitrium patens HOM05D004216 ORTHO05D004926 1.8e-20 102.4 81 61.7
SMO367G1244 Selaginella moellendorffii HOM05D004216 ORTHO05D004926 6.7e-20 100.5 85 56.5
Sabra15G0075800 Salix brachista HOM05D004216 ORTHO05D004926 1.1e-19 99.8 128 43.0
COL.COLO4_22715 Corchorus olitorius HOM05D004216 ORTHO05D004926 2.5e-19 98.6 89 60.7
AagrBONN_evm.TU.Sc2ySwM_117.3880 Anthoceros agrestis HOM05D004216 ORTHO05D004926 9.7e-19 96.7 80 60.0
Phvul.003G177400 Phaseolus vulgaris HOM05D004216 ORTHO05D004926 1.3e-18 96.3 60 73.3
vmacro17679 Vaccinium macrocarpon HOM05D004216 ORTHO05D004926 3.7e-18 94.7 60 75.0
Lj6g0001849 Lotus japonicus HOM05D004216 ORTHO05D004926 1.4e-17 92.8 60 73.3
arahy.Tifrunner.gnm1.ann1.FN32SY Arachis hypogaea HOM05D004216 ORTHO05D004926 1.8e-17 92.4 75 62.7
Lj9P432G41 Lonicera japonica HOM05D004216 ORTHO05D004926 2.0e-16 89.0 56 83.9
Atru.chr9.749 Acer truncatum HOM05D004216 ORTHO05D004926 2.6e-16 88.6 89 55.1
Gohir.A07G038666 Gossypium hirsutum HOM05D004216 ORTHO05D004926 1.0e-15 86.7 102 51.0
Cre13.g583500 Chlamydomonas reinhardtii HOM05D004216 ORTHO05D004926 2.0e-11 72.4 76 44.7
Lsat_1_v5_gn_3_22081 Lactuca sativa HOM05D001700 ORTHO05D013746 4.5e-08 61.2 46 69.6
Cfa022283 Carpinus fangiana HOM05D004216 ORTHO05D004926 5.9e-08 60.8 79 39.2
SHI18927 Sapria himalayana HOM05D004216 ORTHO05D004926 8.5e-07 57.0 39 66.7


User provided reference genes

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