Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 1.7e-157 559.7 369 100.0
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 3.4e-49 199.9 173 61.8
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 5.8e-49 199.1 128 78.9
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 9.9e-49 198.4 127 79.5
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.3e-48 198.0 126 77.8
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 1.3e-48 198.0 160 64.4
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 2.2e-48 197.2 126 79.4
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 3.8e-48 196.4 151 68.2
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 8.4e-48 195.3 126 78.6
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 1.4e-47 194.5 126 77.0
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 1.9e-47 194.1 126 77.0
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 1.9e-47 194.1 126 76.2
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 1.9e-47 194.1 130 77.7
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 4.2e-47 193.0 166 63.9
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 9.3e-47 191.8 129 76.0
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 9.3e-47 191.8 169 62.1
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 1.2e-46 191.4 126 77.8
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 2.1e-46 190.7 126 73.0
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 4.6e-46 189.5 168 63.1
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 4.6e-46 189.5 126 78.6
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 1.7e-45 187.6 126 75.4
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 1.7e-45 187.6 170 59.4
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 1.7e-45 187.6 127 73.2
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 2.3e-45 187.2 126 75.4
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 2.3e-45 187.2 126 75.4
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 2.3e-45 187.2 126 77.0
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 3.0e-45 186.8 127 77.2
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 3.9e-45 186.4 127 71.7
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 5.1e-45 186.0 126 73.8
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 6.6e-45 185.7 164 61.6
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 6.6e-45 185.7 164 61.6
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 8.7e-45 185.3 126 71.4
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 1.1e-44 184.9 127 68.5
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 1.9e-44 184.1 127 77.2
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 2.5e-44 183.7 126 73.8
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 2.5e-44 183.7 127 68.5
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 2.5e-44 183.7 126 75.4
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 3.3e-44 183.3 129 75.2
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 4.3e-44 183.0 126 72.2
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 4.3e-44 183.0 127 74.0
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 5.6e-44 182.6 130 74.6
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 5.6e-44 182.6 126 77.0
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 5.6e-44 182.6 127 76.4
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 7.3e-44 182.2 130 75.4
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 7.3e-44 182.2 127 69.3
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 7.3e-44 182.2 161 62.1
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 9.6e-44 181.8 126 69.8
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 1.3e-43 181.4 123 74.0
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 1.3e-43 181.4 172 56.4
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 1.6e-43 181.0 126 75.4
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.1e-43 180.6 126 76.2
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.1e-43 180.6 126 76.2
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 2.1e-43 180.6 126 73.0
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 2.8e-43 180.3 126 70.6
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 3.6e-43 179.9 125 70.4
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 4.8e-43 179.5 125 71.2
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 6.2e-43 179.1 118 80.5
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 8.1e-43 178.7 126 75.4
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 1.1e-42 178.3 137 65.0
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 1.1e-42 178.3 137 65.0
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 1.1e-42 178.3 137 65.0
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.8e-42 177.6 125 68.8
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 1.8e-42 177.6 125 65.6
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.8e-42 177.6 125 68.8
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 6.9e-42 175.6 126 67.5
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 6.9e-42 175.6 150 60.7
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 6.9e-42 175.6 176 57.4
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.5e-41 174.5 128 67.2
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.5e-41 174.5 128 67.2
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 2.6e-41 173.7 129 69.8
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 5.8e-41 172.6 125 71.2
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 7.6e-41 172.2 125 68.8
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 7.6e-41 172.2 125 68.8
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 7.6e-41 172.2 125 68.8
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 2.2e-40 170.6 126 73.0
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 2.9e-40 170.2 123 69.1
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 2.9e-40 170.2 127 72.4
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 4.9e-40 169.5 92 82.6
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 3.2e-39 166.8 93 81.7
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 3.2e-39 166.8 93 81.7
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 4.2e-39 166.4 139 64.0
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 5.4e-39 166.0 93 81.7
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 7.1e-39 165.6 93 80.6
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 7.1e-39 165.6 92 80.4
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 9.3e-39 165.2 127 69.3
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 1.2e-38 164.9 93 80.6
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 1.2e-38 164.9 93 79.6
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 2.1e-38 164.1 93 79.6
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 2.1e-38 164.1 175 54.9
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 6.0e-38 162.5 93 80.6
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 7.8e-38 162.2 93 78.5
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 1.3e-37 161.4 93 79.6
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 1.3e-37 161.4 93 79.6
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 3.0e-37 160.2 93 78.5
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 3.9e-37 159.8 93 78.5
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 8.7e-37 158.7 93 77.4
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 1.1e-36 158.3 93 78.5
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 1.5e-36 157.9 93 78.5
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 1.5e-36 157.9 93 78.5
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 1.5e-36 157.9 93 76.3
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 1.9e-36 157.5 93 77.4
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 1.9e-36 157.5 126 67.5
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 1.9e-36 157.5 135 63.0
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 3.3e-36 156.8 93 77.4
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 3.3e-36 156.8 145 57.2
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 9.6e-36 155.2 93 75.3
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 1.6e-35 154.5 93 77.4
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 1.8e-34 151.0 116 63.8
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 4.0e-34 149.8 93 74.2
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.2e-33 148.3 152 52.6
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 1.5e-33 147.9 93 72.0
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 2.6e-33 147.1 131 57.3
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 8.4e-32 142.1 93 71.0
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 1.4e-31 141.4 133 58.6
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 2.1e-30 137.5 95 74.7
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 2.3e-29 134.0 93 66.7
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 3.3e-28 130.2 170 44.1
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.4e-26 124.0 71 77.5
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 2.6e-25 120.6 93 54.8
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 7.6e-25 119.0 71 77.5
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 7.6e-25 119.0 167 47.3
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 2.2e-24 117.5 104 58.7
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 9.3e-23 112.1 70 74.3
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 9.3e-23 112.1 70 74.3
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 2.3e-21 107.5 74 70.3
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 2.5e-20 104.0 94 54.3
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 1.6e-19 101.3 89 50.6
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 1.1e-15 88.6 60 68.3
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 9.3e-15 85.5 88 50.0
ATR0693G087 Amborella trichopoda HOM05D005421 ORTHO05D026565 4.3e-12 76.6 65 69.2
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 4.3e-12 76.6 69 59.4
Oeu029357.1 Olea europaea HOM05D005421 ORTHO05D026565 1.4e-10 71.6 72 56.9
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 2.0e-09 67.8 42 76.2


User provided reference genes

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