Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8P277T40 Lonicera japonica HOM05D059923 ORTHO05D001737 1.8e-145 519.2 259 100.0
Lj9P478T51 Lonicera japonica HOM05D059923 ORTHO05D001737 1.1e-38 164.5 106 83.0
DCAR_008328 Daucus carota HOM05D001878 ORTHO05D001737 1.2e-37 161.0 308 38.6
vmacro21925 Vaccinium macrocarpon HOM05D001878 ORTHO05D001737 8.2e-34 148.3 277 41.2
Rhsim07G0136200 Rhododendron simsii HOM05D001878 ORTHO05D001737 6.5e-31 138.7 280 37.9
CSS0022915 Camellia sinensis var. sinensis HOM05D001878 ORTHO05D001737 4.7e-29 132.5 299 35.1
Actinidia25911 Actinidia chinensis HOM05D001878 ORTHO05D001737 1.4e-28 131.0 316 35.8
CSS0013278 Camellia sinensis var. sinensis HOM05D001878 ORTHO05D001737 5.7e-27 125.6 305 37.4
Dinv25137 Davidia involucrata HOM05D001878 ORTHO05D001737 2.8e-26 123.2 340 33.2
Solyc08g007170.1 Solanum lycopersicum HOM05D001878 ORTHO05D001737 2.7e-24 116.7 295 34.2
Sopen08g003120 Solanum pennellii HOM05D001878 ORTHO05D001737 9.4e-22 108.2 295 33.6
PGSC0003DMG400020508 Solanum tuberosum HOM05D001878 ORTHO05D001737 2.7e-21 106.7 304 32.9
Cc08_g11310 Coffea canephora HOM05D001878 ORTHO05D001737 3.6e-21 106.3 310 34.5
Hma1.2p1_0840F.1_g226660 Hydrangea macrophylla HOM05D001878 ORTHO05D001737 2.3e-20 103.6 296 31.8
Lsat_1_v5_gn_6_94181 Lactuca sativa HOM05D001878 ORTHO05D001737 3.7e-18 96.3 283 32.5
Lsat_1_v5_gn_3_15241 Lactuca sativa HOM05D001878 ORTHO05D001737 3.5e-16 89.7 305 30.5
Peaxi162Scf00102g00086 Petunia axillaris HOM05D001878 ORTHO05D001737 1.7e-15 87.4 278 30.2
Ciclev10024664m.g Citrus clementina HOM05D001878 ORTHO05D001737 2.3e-15 87.0 305 28.9
Duzib068G1299 Durio zibethinus HOM05D001878 ORTHO05D001737 2.9e-15 86.7 299 31.4
TWI15G0285 Tripterygium wilfordii HOM05D001878 ORTHO05D001737 8.6e-15 85.1 278 29.5
HanXRQChr03g0089721 Helianthus annuus HOM05D001878 ORTHO05D001737 1.1e-14 84.7 284 30.6
Lsat_1_v5_gn_3_15221 Lactuca sativa HOM05D001878 ORTHO05D001737 1.5e-14 84.3 274 30.7
MSTRG.10274 Avicennia marina HOM05D001878 ORTHO05D001737 3.3e-14 83.2 279 31.5
Gohir.A08G162900 Gossypium hirsutum HOM05D001878 ORTHO05D001737 3.3e-14 83.2 286 32.2
Nitab4.5_0000185g0200 Nicotiana tabacum HOM05D001878 ORTHO05D001737 5.5e-14 82.4 273 33.0
Manes.02G045500 Manihot esculenta HOM05D001878 ORTHO05D001737 7.2e-14 82.0 333 28.2
CAN.G845.21 Capsicum annuum HOM05D001878 ORTHO05D001737 3.6e-13 79.7 274 30.3
Nitab4.5_0006594g0090 Nicotiana tabacum HOM05D001878 ORTHO05D001737 4.7e-13 79.3 270 29.6
Oeu060056.1 Olea europaea HOM05D001878 ORTHO05D001737 6.1e-13 79.0 262 31.3
Sabra01G0120400 Salix brachista HOM05D001878 ORTHO05D001737 1.8e-12 77.4 328 28.4
SalBow4G2533 Salvia bowleyana HOM05D001878 ORTHO05D001737 3.0e-12 76.6 278 29.5
Atru.chr9.1204 Acer truncatum HOM05D001878 ORTHO05D001737 1.2e-11 74.7 292 29.5
Gohir.D12G215000 Gossypium hirsutum HOM05D001878 ORTHO05D001737 1.5e-11 74.3 285 28.4
ECA240G4769 Erigeron canadensis HOM05D001878 ORTHO05D001737 2.0e-11 73.9 267 29.2
ECA246G4732 Erigeron canadensis HOM05D001878 ORTHO05D001737 4.4e-11 72.8 273 29.3
Gorai.008G230600 Gossypium raimondii HOM05D001878 ORTHO05D001737 9.8e-11 71.6 285 28.1
ECA246G4246 Erigeron canadensis HOM05D001878 ORTHO05D001737 1.3e-10 71.2 266 29.7
GSVIVG01003683001 Vitis vinifera HOM05D001878 ORTHO05D001737 1.7e-10 70.9 270 28.9
TWI60G1396 Tripterygium wilfordii HOM05D001878 ORTHO05D001737 2.2e-10 70.5 291 27.5
Potri.001G150600 Populus trichocarpa HOM05D001878 ORTHO05D001737 3.7e-10 69.7 324 25.9
Gohir.A12G212500 Gossypium hirsutum HOM05D001878 ORTHO05D001737 4.9e-10 69.3 284 28.9
THA.LOC104812737 Tarenaya hassleriana HOM05D001878 ORTHO05D001737 4.9e-10 69.3 303 27.7
HanXRQChr01g0016011 Helianthus annuus HOM05D001878 ORTHO05D001737 6.3e-10 68.9 274 25.2
CARHR223640 Cardamine hirsuta HOM05D001878 ORTHO05D001737 2.4e-09 67.0 305 26.9
COL.COLO4_06677 Corchorus olitorius HOM05D001878 ORTHO05D001737 3.2e-09 66.6 305 27.9
Thecc.03G239800 Theobroma cacao HOM05D001878 ORTHO05D001737 4.1e-09 66.2 285 29.1
FAN10G3061 Fragaria x ananassa HOM05D001878 ORTHO05D001737 5.4e-09 65.9 260 30.8
FAN03G2199 Fragaria x ananassa HOM05D001878 ORTHO05D001737 9.2e-09 65.1 260 30.4
Duzib205G1889 Durio zibethinus HOM05D001878 ORTHO05D001737 1.6e-08 64.3 285 28.8
Sabra03G0054300 Salix brachista HOM05D001878 ORTHO05D001737 1.6e-08 64.3 322 26.4
FAN13G0437 Fragaria x ananassa HOM05D001878 ORTHO05D001737 2.0e-08 63.9 266 27.8
BcaNung00128 Brassica carinata HOM05D001878 ORTHO05D001737 2.7e-08 63.5 282 26.6
FAN18G4122 Fragaria x ananassa HOM05D001878 ORTHO05D001737 5.9e-08 62.4 189 29.6
SGA_v2.0_scaffold94G28622 Striga asiatica HOM05D001878 ORTHO05D001737 5.9e-08 62.4 276 29.7
FvH4_5g20390 Fragaria vesca HOM05D001878 ORTHO05D001737 7.8e-08 62.0 189 29.6
FAN04G0383 Fragaria x ananassa HOM05D001878 ORTHO05D001737 7.8e-08 62.0 269 26.8
FAN10G3306 Fragaria x ananassa HOM05D001878 ORTHO05D001737 7.8e-08 62.0 260 31.2
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 2.3e-07 60.5 266 28.2
Potri.003G083800 Populus trichocarpa HOM05D001878 ORTHO05D001737 2.3e-07 60.5 325 25.8
C01p25390 Brassica napus HOM05D001887 ORTHO05D003756 3.9e-07 59.7 290 27.2
BolC1t02491H Brassica oleracea HOM05D001878 ORTHO05D001737 3.9e-07 59.7 290 27.2
FvH4_7g09240 Fragaria vesca HOM05D001878 ORTHO05D001737 6.6e-07 58.9 261 29.1
FAN06G0367 Fragaria x ananassa HOM05D001878 ORTHO05D001737 6.6e-07 58.9 261 29.1
FAN01G1421 Fragaria x ananassa HOM05D001878 ORTHO05D001737 8.6e-07 58.5 260 28.8
RcHm_v2.0_Chr7g0205651 Rosa chinensis HOM05D001878 ORTHO05D001737 8.6e-07 58.5 130 37.7
Aa31LG2G13170 Aethionema arabicum HOM05D001878 ORTHO05D001737 1.5e-06 57.8 296 28.7
A01p20250 Brassica napus HOM05D001887 ORTHO05D003756 1.5e-06 57.8 286 28.0
BraA01t01951Z Brassica rapa HOM05D001878 ORTHO05D001737 1.5e-06 57.8 286 28.0
HanXRQChr17g0533971 Helianthus annuus HOM05D001878 ORTHO05D001737 1.9e-06 57.4 63 54.0
Nn1g00752 Nelumbo nucifera HOM05D001878 ORTHO05D001737 1.9e-06 57.4 259 27.8
Sc07g0009050 Simmondsia chinensis HOM05D001878 ORTHO05D001737 3.3e-06 56.6 105 40.0


User provided reference genes

Program Settings