Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 1.4e-56 223.4 184 100.0
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 8.7e-30 134.4 187 68.4
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 1.2e-26 124.0 191 70.2
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 2.9e-25 119.4 194 67.5
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 3.8e-25 119.0 185 68.1
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 6.5e-25 118.2 182 72.0
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.1e-24 117.5 182 66.5
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 1.9e-24 116.7 149 79.9
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 5.5e-24 115.2 154 74.0
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 9.4e-24 114.4 157 75.2
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 9.4e-24 114.4 151 80.8
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 9.4e-24 114.4 151 80.8
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 9.4e-24 114.4 151 80.8
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 1.2e-23 114.0 181 68.5
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 1.6e-23 113.6 182 66.5
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 1.6e-23 113.6 181 65.7
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 2.1e-23 113.2 112 61.6
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 2.7e-23 112.8 154 77.9
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 3.6e-23 112.5 190 65.3
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 6.1e-23 111.7 112 61.6
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 1.4e-22 110.5 184 70.1
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 1.4e-22 110.5 182 65.4
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 1.8e-22 110.2 184 66.8
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.3e-22 109.8 185 59.5
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 2.3e-22 109.8 185 65.4
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 2.3e-22 109.8 182 67.6
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 6.7e-22 108.2 188 67.6
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 6.7e-22 108.2 113 59.3
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 6.7e-22 108.2 184 65.2
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 8.8e-22 107.8 194 63.9
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 8.8e-22 107.8 188 67.6
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.5e-21 107.1 154 76.0
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 2.5e-21 106.3 186 68.3
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.5e-21 106.3 185 54.1
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 3.3e-21 105.9 184 65.2
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 4.3e-21 105.5 144 77.1
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 7.4e-21 104.8 139 81.3
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 7.4e-21 104.8 189 67.2
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 7.4e-21 104.8 184 65.8
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 9.7e-21 104.4 146 77.4
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 9.7e-21 104.4 157 73.2
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 1.3e-20 104.0 184 67.4
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.2e-20 103.2 185 63.2
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 2.2e-20 103.2 181 65.2
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 3.7e-20 102.4 196 62.8
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 4.8e-20 102.1 147 75.5
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 6.3e-20 101.7 152 74.3
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 8.2e-20 101.3 144 78.5
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 8.2e-20 101.3 195 66.2
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 8.2e-20 101.3 202 57.4
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 1.1e-19 100.9 104 59.6
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.1e-19 100.9 181 62.4
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 1.1e-19 100.9 185 67.0
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.4e-19 100.5 182 65.9
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 1.8e-19 100.1 183 67.2
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.4e-19 99.8 136 81.6
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.1e-19 99.4 181 61.9
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 4.1e-19 99.0 142 77.5
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 4.1e-19 99.0 184 63.6
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 4.1e-19 99.0 145 78.6
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 4.1e-19 99.0 110 53.6
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 5.3e-19 98.6 181 61.9
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 5.3e-19 98.6 182 66.5
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 6.9e-19 98.2 65 78.5
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 9.1e-19 97.8 166 69.3
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 9.1e-19 97.8 133 81.2
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 9.1e-19 97.8 171 68.4
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 1.2e-18 97.4 134 79.9
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 2.0e-18 96.7 139 77.0
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 2.6e-18 96.3 186 65.6
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 3.4e-18 95.9 187 65.2
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 4.5e-18 95.5 142 77.5
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 5.9e-18 95.1 131 81.7
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 7.7e-18 94.7 162 70.4
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 1.7e-17 93.6 180 65.6
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 2.2e-17 93.2 184 63.6
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.1e-16 90.9 192 64.1
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 2.5e-16 89.7 189 64.6
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 3.2e-16 89.4 131 75.6
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 3.2e-16 89.4 138 71.7
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 5.5e-16 88.6 196 52.6
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.2e-15 87.4 190 62.1
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 3.6e-15 85.9 76 63.2
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 4.7e-15 85.5 56 75.0
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 1.4e-14 84.0 108 52.8
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 3.0e-14 82.8 79 60.8
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 3.9e-14 82.4 67 64.2
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.9e-14 82.4 191 62.3
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 5.1e-14 82.0 103 49.5
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 8.8e-14 81.3 63 68.3
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.5e-13 80.5 56 73.2
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 3.3e-13 79.3 76 59.2
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 3.3e-13 79.3 76 59.2
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 3.3e-13 79.3 76 59.2
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 3.3e-13 79.3 109 51.4
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 7.4e-13 78.2 127 72.4
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 2.8e-12 76.3 128 73.4
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 6.3e-12 75.1 128 72.7
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 8.2e-12 74.7 50 70.0
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.8e-11 73.6 53 71.7
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 4.1e-11 72.4 141 69.5
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 1.6e-10 70.5 51 66.7
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.0e-10 70.1 54 63.0
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 2.6e-10 69.7 149 61.7
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 7.7e-10 68.2 103 86.4
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.0e-09 67.8 106 85.8
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 8.5e-09 64.7 104 86.5
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 3.6e-07 59.3 45 66.7
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 1.0e-06 57.8 50 62.0
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 1.8e-06 57.0 27 92.6


User provided reference genes

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