Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8C65T9 Lonicera japonica HOM05D003492 ORTHO05D019467 1.1e-66 256.5 127 100.0
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 1.7e-40 169.5 130 67.7
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 5.4e-39 164.5 129 65.1
Actinidia13944 Actinidia chinensis HOM05D003492 ORTHO05D005115 2.7e-38 162.2 128 64.1
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 1.8e-37 159.5 128 63.3
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 3.0e-37 158.7 128 63.3
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 3.0e-37 158.7 127 65.4
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 3.9e-37 158.3 129 62.8
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 5.1e-37 157.9 129 62.8
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 8.7e-37 157.1 131 61.1
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 1.5e-36 156.4 130 60.8
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 1.5e-36 156.4 126 62.7
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 1.5e-36 156.4 125 66.4
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 2.5e-36 155.6 129 61.2
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 2.5e-36 155.6 128 63.3
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 4.3e-36 154.8 129 61.2
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 7.4e-36 154.1 129 61.2
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.3e-35 153.3 129 61.2
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 2.8e-35 152.1 130 60.8
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 3.7e-35 151.8 129 62.8
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 8.1e-35 150.6 130 59.2
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 1.1e-34 150.2 126 59.5
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 1.4e-34 149.8 130 60.0
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 2.4e-34 149.1 128 57.8
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 6.9e-34 147.5 129 57.4
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 1.2e-33 146.7 130 58.5
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 2.6e-33 145.6 127 63.0
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 1.3e-32 143.3 131 59.5
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 2.2e-32 142.5 123 61.8
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 2.9e-32 142.1 126 61.1
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 4.9e-32 141.4 130 54.6
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 8.4e-32 140.6 124 57.3
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 1.4e-31 139.8 131 55.7
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 2.4e-31 139.0 124 57.3
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 5.5e-31 137.9 126 56.3
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 5.5e-31 137.9 123 57.7
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 1.2e-30 136.7 124 56.5
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 1.2e-30 136.7 124 56.5
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 1.2e-30 136.7 124 58.1
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 1.2e-30 136.7 124 58.1
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 1.6e-30 136.3 131 55.0
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 2.7e-30 135.6 127 55.9
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.7e-30 135.6 127 56.7
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 2.7e-30 135.6 124 54.8
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 3.5e-30 135.2 126 54.8
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 4.6e-30 134.8 127 53.5
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 4.6e-30 134.8 124 56.5
Os05g0354300 Oryza sativa ssp. japonica HOM05D003492 ORTHO05D005115 6.0e-30 134.4 123 49.6
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 7.9e-30 134.0 130 55.4
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 7.9e-30 134.0 130 52.3
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 7.9e-30 134.0 124 53.2
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 7.9e-30 134.0 123 55.3
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 1.0e-29 133.7 126 55.6
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 1.0e-29 133.7 127 55.9
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 1.3e-29 133.3 127 55.1
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 2.3e-29 132.5 123 57.7
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 2.3e-29 132.5 124 54.8
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 3.0e-29 132.1 130 51.5
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 3.9e-29 131.7 126 55.6
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 3.9e-29 131.7 126 55.6
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 5.1e-29 131.3 126 50.8
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 5.1e-29 131.3 126 50.8
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 6.7e-29 131.0 131 54.2
SalBow5G5368 Salvia bowleyana HOM05D003492 ORTHO05D005115 6.7e-29 131.0 126 57.1
Actinidia00955 Actinidia chinensis HOM05D003492 ORTHO05D019467 8.7e-29 130.6 109 65.1
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 8.7e-29 130.6 125 54.4
SHI03327 Sapria himalayana HOM05D003492 ORTHO05D000001 1.5e-28 129.8 128 54.7
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 1.9e-28 129.4 130 53.1
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 1.9e-28 129.4 130 53.8
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 1.9e-28 129.4 126 54.8
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 3.3e-28 128.6 124 54.0
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 4.3e-28 128.3 130 53.1
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 4.3e-28 128.3 130 53.1
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 4.3e-28 128.3 127 53.5
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 4.3e-28 128.3 124 52.4
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 7.4e-28 127.5 131 51.9
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 7.4e-28 127.5 130 54.6
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 7.4e-28 127.5 128 50.8
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 1.6e-27 126.3 130 53.1
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 2.8e-27 125.6 129 52.7
Cc02_g06300 Coffea canephora HOM05D003492 ORTHO05D005115 2.8e-27 125.6 130 51.5
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 3.7e-27 125.2 130 52.3
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 4.8e-27 124.8 128 53.1
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 6.2e-27 124.4 124 51.6
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.1e-26 123.6 122 52.5
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 2.6e-25 119.0 127 44.9
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 5.8e-25 117.9 128 47.7
HPP92_012039 Vanilla planifolia HOM05D003492 ORTHO05D005115 1.7e-24 116.3 128 47.7
CAN.G78.72 Capsicum annuum HOM05D003492 ORTHO05D019467 2.2e-24 115.9 128 48.4
CAN.G1193.2 Capsicum annuum HOM05D003492 ORTHO05D019467 3.8e-24 115.2 127 49.6
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 4.9e-24 114.8 122 49.2
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 1.1e-23 113.6 106 54.7
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 3.5e-22 108.6 124 46.8
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 1.3e-21 106.7 106 49.1
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 6.7e-21 104.4 130 42.3
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 2.6e-17 92.4 107 48.6
SEGI_23081 Sequoiadendron giganteum HOM05D003492 ORTHO05D019467 1.0e-16 90.5 144 36.8
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 6.1e-14 81.3 137 37.2
Potri.010G187201 Populus trichocarpa HOM05D003492 ORTHO05D019467 8.2e-11 70.9 58 62.1
Sabra10G0144400 Salix brachista HOM05D003492 ORTHO05D019467 4.2e-07 58.5 123 37.4


User provided reference genes

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