Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A65G43 Lonicera japonica HOM05D003492 ORTHO05D005115 1.2e-188 662.9 320 100.0
Actinidia13944 Actinidia chinensis HOM05D003492 ORTHO05D005115 1.9e-133 479.6 312 76.9
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 1.2e-130 470.3 317 75.7
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 2.6e-130 469.2 311 76.8
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 8.4e-129 464.2 312 75.0
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 8.4e-129 464.2 312 74.4
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 8.4e-129 464.2 312 74.4
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.1e-128 463.8 312 74.4
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 1.9e-128 463.0 313 74.8
Thecc.10G014500 Theobroma cacao HOM05D003492 ORTHO05D005115 2.4e-128 462.6 312 74.0
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 4.2e-128 461.8 309 74.4
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 7.1e-128 461.1 316 72.8
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 1.2e-127 460.3 314 73.9
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 1.6e-127 459.9 313 74.4
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 2.1e-127 459.5 312 74.0
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 2.1e-127 459.5 312 74.4
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 2.7e-127 459.1 312 74.7
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.5e-127 458.8 316 73.1
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 7.8e-127 457.6 312 72.8
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 7.8e-127 457.6 312 74.4
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.9e-126 455.3 314 73.2
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 3.9e-126 455.3 351 69.5
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 5.1e-126 454.9 312 74.4
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 8.7e-126 454.1 312 73.4
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 8.7e-126 454.1 312 73.4
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 2.5e-125 452.6 312 73.4
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 3.3e-125 452.2 312 73.4
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 3.3e-125 452.2 312 73.7
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 4.3e-125 451.8 313 72.2
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 5.6e-125 451.4 308 74.4
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 7.3e-125 451.1 312 72.8
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 1.3e-124 450.3 315 72.7
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 1.3e-124 450.3 309 72.8
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.6e-124 449.9 313 73.8
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 2.8e-124 449.1 309 72.8
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 3.6e-124 448.7 312 73.1
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 4.8e-124 448.4 313 73.5
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 6.2e-124 448.0 312 71.5
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 1.4e-123 446.8 312 71.2
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 1.8e-123 446.4 312 71.8
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 1.8e-123 446.4 312 71.5
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 2.4e-123 446.0 312 71.5
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 5.3e-123 444.9 312 72.1
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 5.3e-123 444.9 312 73.1
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 6.9e-123 444.5 312 71.5
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 9.0e-123 444.1 308 72.1
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 3.4e-122 442.2 312 69.6
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 4.5e-122 441.8 312 68.9
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 5.8e-122 441.4 312 71.8
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 5.8e-122 441.4 312 70.8
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 7.6e-122 441.0 312 71.2
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 7.6e-122 441.0 312 71.5
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 9.9e-122 440.7 308 70.5
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 9.9e-122 440.7 315 70.5
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 9.9e-122 440.7 312 70.8
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 1.3e-121 440.3 312 67.9
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 1.1e-120 437.2 315 70.2
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 1.4e-120 436.8 312 70.2
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 1.9e-120 436.4 315 70.2
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 3.2e-120 435.6 315 69.8
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 1.2e-119 433.7 312 70.5
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 1.2e-119 433.7 308 68.5
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 2.1e-119 433.0 317 69.1
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 1.0e-118 430.6 310 69.4
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 2.3e-118 429.5 304 70.1
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 2.3e-118 429.5 322 68.9
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 3.0e-118 429.1 372 62.1
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 1.1e-117 427.2 323 67.8
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 2.5e-117 426.0 312 67.6
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 5.6e-117 424.9 309 69.9
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 9.6e-117 424.1 325 67.7
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 1.6e-116 423.3 323 67.5
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 2.1e-116 422.9 331 66.8
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 2.1e-116 422.9 325 67.7
Peaxi162Scf00284g00913 Petunia axillaris HOM05D003492 ORTHO05D005115 2.8e-116 422.5 311 69.1
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 4.8e-116 421.8 312 68.6
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 3.1e-115 419.1 287 73.2
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 3.1e-115 419.1 311 68.2
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 6.9e-115 417.9 309 70.2
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 2.9e-113 412.5 337 63.2
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 3.8e-113 412.1 311 68.2
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 6.4e-113 411.4 330 63.9
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 6.4e-113 411.4 309 68.9
Solyc06g048460.2 Solanum lycopersicum HOM05D003492 ORTHO05D005115 1.4e-112 410.2 311 67.8
CAN.G78.71 Capsicum annuum HOM05D003492 ORTHO05D005115 5.5e-112 408.3 313 68.1
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 9.3e-112 407.5 357 59.7
Os05g0354300 Oryza sativa ssp. japonica HOM05D003492 ORTHO05D005115 2.1e-111 406.4 311 65.0
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 2.3e-110 402.9 315 65.7
CAN.G1193.3 Capsicum annuum HOM05D003492 ORTHO05D005115 2.3e-110 402.9 313 67.1
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 4.8e-108 395.2 313 64.9
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.4e-107 393.7 249 77.5
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 2.6e-106 389.4 266 71.8
HPP92_012039 Vanilla planifolia HOM05D003492 ORTHO05D005115 7.9e-103 377.9 311 60.8
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 1.2e-98 364.0 249 69.9
SEGI_27844 Sequoiadendron giganteum HOM05D003492 ORTHO05D005115 1.4e-96 357.1 312 57.4
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 1.2e-95 354.0 303 63.4
SHI03328 Sapria himalayana HOM05D003492 ORTHO05D005115 2.5e-93 346.3 248 68.1
Mapoly0044s0071 Marchantia polymorpha HOM05D003492 ORTHO05D005115 9.7e-93 344.4 300 58.3
Pp3c11_19460 Physcomitrium patens HOM05D003492 ORTHO05D005115 2.4e-91 339.7 288 61.8
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 5.3e-91 338.6 312 57.7
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis HOM05D003492 ORTHO05D005115 8.5e-89 331.3 295 54.6
Cc02_g06300 Coffea canephora HOM05D003492 ORTHO05D005115 3.1e-83 312.8 208 73.6
SMO105G0008 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 5.3e-83 312.0 282 60.6
CBR_g22845 Chara braunii HOM05D003492 ORTHO05D005115 2.1e-79 300.1 301 54.2
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 3.9e-78 295.8 212 70.8
BcaB05g21711 Brassica carinata HOM05D003492 ORTHO05D005115 3.7e-76 289.3 193 77.2
SMO331G0080 Selaginella moellendorffii HOM05D003492 ORTHO05D005115 7.2e-64 248.4 281 52.7
SalBow5G5368 Salvia bowleyana HOM05D003492 ORTHO05D005115 2.0e-61 240.4 179 65.9
MCO04G065 Micromonas commoda HOM05D003492 ORTHO05D005115 1.1e-38 164.9 318 36.8
Cre13.g579100 Chlamydomonas reinhardtii HOM05D003492 ORTHO05D005115 2.8e-31 140.2 148 52.0
Cc02_g06290 Coffea canephora HOM05D003492 ORTHO05D005115 5.6e-24 115.9 80 72.5
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 1.2e-21 108.2 198 38.4
Cfa022850 Carpinus fangiana HOM05D003492 ORTHO05D005115 2.4e-19 100.5 185 35.1
Actinidia02211 Actinidia chinensis HOM05D003492 ORTHO05D005115 1.3e-12 78.2 86 48.8
Actinidia02220 Actinidia chinensis HOM05D003492 ORTHO05D005115 4.8e-07 59.7 38 71.1


User provided reference genes

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