Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 3.5e-144 515.0 267 100.0
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 9.1e-129 463.8 266 86.1
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 4.5e-128 461.5 266 85.3
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 1.0e-127 460.3 264 85.2
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 1.6e-125 453.0 266 82.3
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 1.6e-125 453.0 267 82.8
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 6.1e-125 451.1 266 82.7
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 1.0e-124 450.3 266 83.5
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 1.4e-124 449.9 264 84.1
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 1.4e-124 449.9 266 83.5
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 1.8e-124 449.5 264 83.0
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 4.0e-124 448.4 266 82.3
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 5.2e-124 448.0 266 83.5
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 8.8e-124 447.2 266 83.1
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 1.2e-123 446.8 266 82.7
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 1.5e-123 446.4 266 79.7
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 2.0e-123 446.0 266 82.7
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 2.0e-123 446.0 266 82.7
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 2.6e-123 445.7 266 82.3
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 2.6e-123 445.7 266 80.8
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 7.5e-123 444.1 266 81.6
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 7.5e-123 444.1 266 82.3
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 9.8e-123 443.7 266 81.2
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 1.7e-122 443.0 266 82.3
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 2.8e-122 442.2 266 81.2
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 2.8e-122 442.2 266 81.2
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 4.9e-122 441.4 266 82.3
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 8.3e-122 440.7 266 79.7
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 8.3e-122 440.7 266 79.7
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 1.8e-121 439.5 266 79.3
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.8e-121 439.5 266 80.1
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 3.1e-121 438.7 266 80.5
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 4.1e-121 438.3 266 78.9
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 5.4e-121 438.0 266 79.7
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 9.1e-121 437.2 266 78.2
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 9.1e-121 437.2 266 80.1
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 9.1e-121 437.2 266 80.1
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 1.2e-120 436.8 266 80.8
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 2.0e-120 436.0 266 81.6
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 2.7e-120 435.6 266 78.6
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 3.5e-120 435.3 266 81.6
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 3.5e-120 435.3 265 77.7
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 4.5e-120 434.9 266 79.7
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 5.9e-120 434.5 266 78.2
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 5.9e-120 434.5 266 77.8
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 7.7e-120 434.1 264 81.4
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 1.0e-119 433.7 266 77.4
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 1.0e-119 433.7 266 78.9
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 1.3e-119 433.3 253 83.4
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 1.3e-119 433.3 266 77.8
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 1.7e-119 433.0 266 77.1
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.3e-119 432.6 273 78.4
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 2.9e-119 432.2 266 79.3
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 5.0e-119 431.4 266 77.8
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 5.0e-119 431.4 266 78.2
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 8.6e-119 430.6 267 79.8
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 1.1e-118 430.3 266 77.4
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 1.9e-118 429.5 277 75.8
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 3.3e-118 428.7 266 79.3
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 9.5e-118 427.2 272 78.7
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 1.6e-117 426.4 264 80.3
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 2.1e-117 426.0 266 77.4
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 3.6e-117 425.2 266 75.2
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 6.1e-117 424.5 285 75.1
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 1.4e-116 423.3 266 76.3
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 1.4e-116 423.3 266 76.3
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 1.8e-116 422.9 265 76.2
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 1.8e-116 422.9 266 76.3
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 2.3e-116 422.5 266 77.1
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 2.3e-116 422.5 267 77.2
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 3.0e-116 422.2 270 77.4
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 4.0e-116 421.8 266 76.3
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 6.8e-116 421.0 265 76.2
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 4.4e-115 418.3 266 76.7
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 2.9e-114 415.6 266 77.1
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 3.7e-114 415.2 274 76.3
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 8.3e-114 414.1 266 73.7
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 4.1e-113 411.8 262 78.2
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 5.4e-113 411.4 266 75.2
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 1.6e-112 409.8 267 77.9
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 2.0e-112 409.5 266 74.4
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 5.9e-112 407.9 266 74.4
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 5.9e-112 407.9 294 69.4
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 5.9e-112 407.9 267 76.0
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 3.9e-111 405.2 266 77.4
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 2.5e-110 402.5 297 71.0
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 3.3e-110 402.1 267 74.5
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 5.6e-110 401.4 239 77.8
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 1.0e-108 397.1 265 72.8
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 1.4e-108 396.7 270 73.7
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.4e-108 396.7 267 72.7
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 4.0e-108 395.2 325 62.5
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 6.8e-108 394.4 268 73.1
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 6.8e-108 394.4 267 71.5
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 1.2e-107 393.7 266 72.2
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 2.0e-107 392.9 267 71.2
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 2.6e-107 392.5 270 72.6
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 3.4e-107 392.1 231 82.7
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 9.8e-107 390.6 267 71.9
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.3e-106 390.2 270 73.0
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 2.9e-106 389.0 270 72.2
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 4.9e-106 388.3 266 73.3
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 6.4e-106 387.9 266 75.6
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 8.3e-106 387.5 267 70.8
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 8.3e-106 387.5 270 71.9
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 1.4e-105 386.7 267 71.2
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 1.4e-105 386.7 270 71.5
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 4.6e-104 381.7 270 70.4
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 6.0e-104 381.3 270 71.1
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 7.8e-104 380.9 266 69.9
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 1.0e-103 380.6 270 71.1
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.0e-103 380.6 266 69.5
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.0e-103 380.6 266 69.5
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 1.3e-103 380.2 270 70.7
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 1.3e-103 380.2 270 71.1
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 1.3e-103 380.2 265 70.6
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 3.9e-103 378.6 270 70.7
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 8.6e-103 377.5 268 70.9
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 1.1e-102 377.1 270 70.4
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 1.1e-102 377.1 309 62.8
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 4.3e-102 375.2 270 70.4
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 7.3e-102 374.4 267 71.5
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.8e-101 372.5 265 70.9
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 8.1e-101 370.9 273 70.0
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 5.2e-100 368.2 260 71.2
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 6.8e-100 367.9 266 70.7
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 6.8e-100 367.9 231 77.1
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.5e-99 366.7 272 69.5
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 9.8e-99 364.0 266 71.8
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 1.9e-97 359.8 266 69.5
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 1.9e-97 359.8 266 69.5
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 3.2e-97 359.0 290 64.5
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 5.1e-95 351.7 267 68.5
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 3.6e-93 345.5 234 73.1
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 1.1e-92 344.0 267 62.5
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.5e-91 340.1 250 67.2
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 2.2e-90 336.3 197 81.7
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.4e-89 333.6 242 73.1
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 1.3e-87 327.0 197 79.7
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 3.3e-86 322.4 263 62.4
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 4.3e-86 322.0 266 60.2
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 2.1e-85 319.7 325 54.2
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 3.1e-84 315.8 207 73.9
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 1.7e-82 310.1 249 65.9
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 2.7e-80 302.8 239 66.1
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 7.9e-72 274.6 245 59.6
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 8.7e-71 271.2 258 53.1
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 8.4e-66 254.6 197 61.4
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.6e-53 213.8 280 49.6
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.1e-52 209.5 329 44.1
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 5.3e-52 208.8 209 60.3
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 5.9e-51 205.3 120 79.2
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 5.7e-46 188.7 156 60.9
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 1.6e-45 187.2 122 72.1
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 6.9e-44 181.8 268 41.4
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 2.0e-43 180.3 157 56.1
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 1.0e-42 177.9 156 62.2
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 2.0e-35 153.7 155 52.9
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.0e-30 137.1 281 40.2
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 1.3e-29 134.4 86 69.8
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 1.6e-27 127.5 275 37.8
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 7.7e-27 125.2 224 34.4
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 4.2e-25 119.4 120 51.7
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.7e-21 107.5 66 83.3
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 2.8e-21 106.7 175 42.3
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.4e-20 104.4 118 50.8
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 3.1e-20 103.2 94 56.4
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 8.3e-13 78.6 47 83.0
Actinidia31513 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.7e-08 63.5 56 62.5
SEGI_16571 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 6.8e-07 58.9 49 61.2
CBR_g928 Chara braunii HOM05D015229 ORTHO05D017822 8.8e-07 58.5 153 29.4
TAR636G0763 Trochodendron aralioides HOM05D000008 ORTHO05D415803 7.5e-06 55.5 42 73.8


User provided reference genes

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