Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7P182T18 Lonicera japonica HOM05D011603 ORTHO05D015152 1.8e-99 365.9 182 100.0
Lj3P562T2 Lonicera japonica HOM05D011603 ORTHO05D015152 2.8e-97 358.6 182 97.3
Lj1P394T8 Lonicera japonica HOM05D011603 ORTHO05D015152 5.3e-96 354.4 182 96.7
Lj1P441T13 Lonicera japonica HOM05D011603 ORTHO05D015152 2.2e-94 349.0 182 96.2
Lj3P631T13 Lonicera japonica HOM05D011603 ORTHO05D015152 2.7e-92 342.0 182 94.5
Lj3P275T14 Lonicera japonica HOM05D011603 ORTHO05D015152 2.3e-83 312.4 184 88.0
Lj2C470T8 Lonicera japonica HOM05D011603 ORTHO05D015152 8.3e-73 277.3 144 94.4
Lj5P650T20 Lonicera japonica HOM05D011603 ORTHO05D015152 3.5e-71 271.9 182 81.3
Lj8P486T8 Lonicera japonica HOM05D011603 ORTHO05D015152 3.3e-61 238.8 186 68.8
Lj5P633T13 Lonicera japonica HOM05D011603 ORTHO05D015152 9.2e-56 220.7 139 82.7
Lj2P768T3 Lonicera japonica HOM05D011603 ORTHO05D015152 3.7e-41 172.2 103 88.3
Lj8P598T2 Lonicera japonica HOM05D011603 ORTHO05D015152 3.9e-38 162.2 90 83.3
Lj8P592T19 Lonicera japonica HOM05D011603 ORTHO05D015152 1.5e-37 160.2 90 82.2
PSO675G0717 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-09 67.0 103 37.9
PSO017G4903 Papaver somniferum HOM05D000004 ORTHO05D000224 3.8e-09 65.9 103 37.9
PSO063G2857 Papaver somniferum HOM05D000004 ORTHO05D000224 3.8e-09 65.9 103 37.9
CANSAT64G1493 Cannabis sativa HOM05D000004 ORTHO05D000034 5.5e-08 62.0 125 29.6
CANSAT25G2214 Cannabis sativa HOM05D000004 ORTHO05D000034 9.3e-08 61.2 156 27.6
THA.LOC109116484 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 9.3e-08 61.2 130 29.2
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-07 60.8 125 25.6
QL09p028348 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-07 60.8 94 35.1
QL05p006227 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-07 60.5 94 35.1
QL93p2008_0037 Quercus lobata HOM05D000004 ORTHO05D000002 1.6e-07 60.5 94 34.0
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-07 60.1 93 29.0
Thecc.K0005200 Theobroma cacao HOM05D010356 ORTHO05D000034 2.1e-07 60.1 99 31.3
TWI63G1028 Tripterygium wilfordii HOM05D011603 ORTHO05D000034 2.1e-07 60.1 84 34.5
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-07 59.7 125 25.6
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-07 59.7 93 29.0
QL11p024965 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-07 59.7 88 36.4
MBI17_g31372_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D000224 4.6e-07 58.9 91 33.0
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.6e-07 58.9 94 29.8
Thecc.06G051600 Theobroma cacao HOM05D010356 ORTHO05D000034 6.0e-07 58.5 99 30.3
CANSAT25G2080 Cannabis sativa HOM05D000004 ORTHO05D000034 7.9e-07 58.2 84 32.1
Thecc.02G165200 Theobroma cacao HOM05D010356 ORTHO05D000034 1.0e-06 57.8 124 28.2
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.8e-06 57.0 108 27.8
TWI81G0793 Tripterygium wilfordii HOM05D011603 ORTHO05D000224 1.8e-06 57.0 112 30.4
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 2.3e-06 56.6 118 29.7
THA.LOC104815204 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 2.3e-06 56.6 90 30.0
TWI79G0328 Tripterygium wilfordii HOM05D053866 ORTHO05D000224 2.3e-06 56.6 88 30.7
FvH4_5g25322 Fragaria vesca HOM05D000004 ORTHO05D000002 3.0e-06 56.2 81 34.6
Thecc.09G178000 Theobroma cacao HOM05D010356 ORTHO05D000034 3.0e-06 56.2 118 28.8
FvH4_3g35751 Fragaria vesca HOM05D000004 ORTHO05D012516 3.9e-06 55.8 81 34.6
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.1e-06 55.5 90 27.8
Thecc.02G145100 Theobroma cacao HOM05D010356 ORTHO05D000034 5.1e-06 55.5 98 30.6
arahy.Tifrunner.gnm1.ann1.TJHM4M Arachis hypogaea HOM05D000004 ORTHO05D000224 6.7e-06 55.1 112 31.2
FvH4_1g29231 Fragaria vesca HOM05D000004 ORTHO05D000002 6.7e-06 55.1 81 33.3
FvH4_4g02642 Fragaria vesca HOM05D000004 ORTHO05D000002 6.7e-06 55.1 81 33.3
FvH4_4g05523 Fragaria vesca HOM05D000004 ORTHO05D000002 6.7e-06 55.1 81 33.3
FvH4_4g06722 Fragaria vesca HOM05D000004 ORTHO05D012516 6.7e-06 55.1 81 33.3
FvH4_4g14822 Fragaria vesca HOM05D000004 ORTHO05D012516 6.7e-06 55.1 81 33.3
FvH4_4g15471 Fragaria vesca HOM05D000004 ORTHO05D000002 6.7e-06 55.1 81 33.3
FvH4_4g18131 Fragaria vesca HOM05D000004 ORTHO05D012516 6.7e-06 55.1 81 33.3
FvH4_5g13881 Fragaria vesca HOM05D000004 ORTHO05D012516 6.7e-06 55.1 81 33.3
FvH4_5g36692 Fragaria vesca HOM05D000004 ORTHO05D000002 6.7e-06 55.1 81 33.3
FvH4_6g21771 Fragaria vesca HOM05D000004 ORTHO05D000002 6.7e-06 55.1 81 33.3
FvH4_7g08381 Fragaria vesca HOM05D000004 ORTHO05D012516 6.7e-06 55.1 81 33.3
FvH4_7g19711 Fragaria vesca HOM05D000004 ORTHO05D012516 6.7e-06 55.1 81 33.3
THA.LOC109116382 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.7e-06 55.1 126 24.6
Thecc.06G081500 Theobroma cacao HOM05D010356 ORTHO05D000034 6.7e-06 55.1 91 33.0
FvH4_3g28781 Fragaria vesca HOM05D000004 ORTHO05D000002 8.7e-06 54.7 81 32.1
FvH4_4g13341 Fragaria vesca HOM05D000004 ORTHO05D000002 8.7e-06 54.7 81 33.3
FvH4_6g08531 Fragaria vesca HOM05D000004 ORTHO05D012516 8.7e-06 54.7 81 33.3


User provided reference genes

Program Settings