Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7C222T11 Lonicera japonica HOM05D013435 ORTHO05D000022 4.0e-223 777.7 370 100.0
Lju1058C1G0 Lonicera japonica HOM05D000155 ORTHO05D000022 2.5e-20 104.0 181 34.8
Peaxi162Scf00251g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 1.0e-16 92.0 196 30.6
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 2.2e-11 74.3 219 22.4
Lj9P673T29 Lonicera japonica HOM05D000155 ORTHO05D000022 2.8e-11 73.9 75 48.0
Lj7P711T40 Lonicera japonica HOM05D000155 ORTHO05D000022 8.2e-11 72.4 75 45.3
Nitab4.5_0000147g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.4e-10 71.6 173 27.2
MBI18_g16547_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.8e-10 71.2 302 24.2
Lj7P241T13 Lonicera japonica HOM05D000155 ORTHO05D000022 3.1e-10 70.5 66 40.9
Lj2P663T6 Lonicera japonica HOM05D000155 ORTHO05D000022 5.3e-10 69.7 66 42.4
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-09 67.8 215 25.1
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 4.5e-09 66.6 304 22.0
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 4.5e-09 66.6 201 22.9
Lju515C0G5 Lonicera japonica HOM05D013435 ORTHO05D013087 1.3e-08 65.1 220 25.9
MBI14_g12128_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.3e-08 65.1 114 28.1
MBI15_g26824_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 1.3e-08 65.1 83 34.9
Nitab4.5_0008964g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-08 65.1 201 25.9
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.2e-08 64.3 62 38.7
MBI07_g38405_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.9e-08 63.9 79 38.0
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 3.8e-08 63.5 215 24.7
SHI44498 Sapria himalayana HOM05D000024 ORTHO05D000022 6.5e-08 62.8 218 24.3
Lj6P673T55 Lonicera japonica HOM05D000155 ORTHO05D000022 8.5e-08 62.4 66 43.9
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 8.5e-08 62.4 215 24.2
Peaxi162Scf02408g00006 Petunia axillaris HOM05D001426 ORTHO05D001389 1.1e-07 62.0 213 24.9
Peaxi162Scf53938g00004 Petunia axillaris HOM05D001426 ORTHO05D001389 1.1e-07 62.0 213 24.9
PGSC0003DMG400008628 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.1e-07 62.0 96 27.1
Thecc.03G325600 Theobroma cacao HOM05D000003 ORTHO05D000006 1.1e-07 62.0 85 38.8
Nn1g09993 Nelumbo nucifera HOM05D000155 ORTHO05D000022 1.9e-07 61.2 84 34.5
Nn1g10094 Nelumbo nucifera HOM05D000155 ORTHO05D000022 1.9e-07 61.2 84 34.5
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 1.9e-07 61.2 85 35.3
MBI16_g33345_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.5e-07 60.8 168 23.8
Lj6P535T15 Lonicera japonica HOM05D001426 ORTHO05D000022 4.2e-07 60.1 78 37.2
Nitab4.5_0000023g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.2e-07 60.1 185 26.5
Cc00_g05270 Coffea canephora HOM05D000155 ORTHO05D000022 5.5e-07 59.7 77 41.6
MBI07_g36566_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.2e-07 59.3 80 33.8
Sopen06g012050 Solanum pennellii HOM05D000155 ORTHO05D000022 7.2e-07 59.3 215 22.8
SHI23610 Sapria himalayana HOM05D000024 ORTHO05D000006 9.4e-07 58.9 126 27.0
SHI50257 Sapria himalayana HOM05D000024 ORTHO05D000022 9.4e-07 58.9 100 31.0
TAR014G0002 Trochodendron aralioides HOM05D000155 ORTHO05D000022 1.2e-06 58.5 76 31.6
MBI11_g24786_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 58.2 135 28.9
MBI10_g04436_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 57.4 79 31.6
MBI15_g44989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 57.4 79 31.6
SHI34875 Sapria himalayana HOM05D000024 ORTHO05D000006 2.7e-06 57.4 126 26.2
MBI15_g44988_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-06 57.0 79 32.9
MBI18_g33698_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-06 57.0 102 30.4
MBI19_g24057_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.6e-06 57.0 128 26.6
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 3.6e-06 57.0 215 21.4
Sopen10g015360 Solanum pennellii HOM05D000155 ORTHO05D000022 3.6e-06 57.0 215 22.8
MBI05_g22875_MAGBIO Magnolia biondii HOM05D000038 ORTHO05D000143 6.1e-06 56.2 68 36.8
SHI19898 Sapria himalayana HOM05D000024 ORTHO05D000022 6.1e-06 56.2 100 30.0
SHI44086 Sapria himalayana HOM05D000024 ORTHO05D000022 6.1e-06 56.2 136 25.7
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 6.1e-06 56.2 168 26.2
MBI06_g39080_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.9e-06 55.8 91 30.8
Nitab4.5_0005970g0030 Nicotiana tabacum HOM05D000032 ORTHO05D006669 7.9e-06 55.8 62 33.9
SHI31820 Sapria himalayana HOM05D000003 ORTHO05D000004 7.9e-06 55.8 144 24.3
SHI35422 Sapria himalayana HOM05D000024 ORTHO05D000022 7.9e-06 55.8 89 34.8
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 7.9e-06 55.8 234 21.4
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 7.9e-06 55.8 234 21.4


User provided reference genes

Program Settings