Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.7e-157 559.3 279 100.0
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 3.8e-125 451.8 274 81.8
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 8.6e-122 440.7 279 78.9
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.5e-121 439.1 278 77.3
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 6.9e-119 431.0 277 76.5
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 3.4e-118 428.7 265 80.0
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 4.4e-118 428.3 276 75.4
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 9.9e-118 427.2 276 75.0
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 8.4e-117 424.1 274 75.2
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 1.1e-116 423.7 277 74.4
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 2.4e-116 422.5 281 75.1
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 3.2e-116 422.2 277 75.1
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 7.8e-115 417.5 275 74.5
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 3.3e-113 412.1 276 73.2
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 2.1e-112 409.5 265 75.8
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 2.1e-112 409.5 277 72.6
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 1.4e-111 406.8 277 72.6
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 4.5e-110 401.7 249 79.1
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.7e-109 399.8 272 72.8
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 2.2e-109 399.4 269 74.7
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 2.2e-109 399.4 275 72.4
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 8.4e-109 397.5 278 71.6
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 1.4e-108 396.7 277 72.2
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 1.9e-108 396.4 275 72.4
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 1.9e-108 396.4 287 68.3
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 1.9e-108 396.4 261 74.3
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 3.2e-108 395.6 275 71.3
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 4.2e-108 395.2 245 77.1
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 9.3e-108 394.0 277 71.1
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.2e-107 393.7 268 72.0
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.1e-107 392.9 275 70.9
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 2.1e-107 392.9 252 74.2
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 2.7e-107 392.5 267 72.7
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 4.6e-107 391.7 281 69.0
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.0e-106 390.6 261 72.4
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.0e-106 390.6 261 72.4
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.0e-106 390.6 261 72.4
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 2.3e-106 389.4 266 72.2
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 3.9e-106 388.7 281 67.3
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.7e-106 387.9 275 69.1
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 6.7e-106 387.9 270 71.1
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 6.7e-106 387.9 283 69.3
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 6.7e-106 387.9 275 72.0
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 1.9e-105 386.3 275 71.6
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 3.3e-105 385.6 275 68.4
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 2.1e-104 382.9 259 69.5
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 2.1e-104 382.9 267 68.9
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 2.8e-104 382.5 266 69.9
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 6.9e-103 377.9 254 72.4
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 1.2e-102 377.1 277 68.6
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 3.4e-102 375.6 252 72.2
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 4.5e-102 375.2 263 71.1
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.3e-101 373.6 267 66.7
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 1.7e-101 373.2 237 75.1
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.8e-101 372.1 262 72.9
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 4.9e-101 371.7 278 66.2
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 1.9e-100 369.8 263 67.7
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 1.9e-100 369.8 263 67.7
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 1.9e-100 369.8 263 67.7
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.9e-100 369.8 298 62.1
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 2.4e-100 369.4 269 67.7
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 5.5e-100 368.2 256 69.1
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 5.5e-100 368.2 256 69.1
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 7.1e-100 367.9 286 64.0
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 2.7e-99 365.9 277 65.7
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 4.6e-99 365.2 267 67.0
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 1.8e-98 363.2 277 63.5
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 3.0e-98 362.5 251 68.9
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 3.0e-98 362.5 266 67.3
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 6.7e-98 361.3 279 64.9
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 8.7e-98 360.9 236 74.2
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 1.3e-96 357.1 269 65.4
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 1.3e-96 357.1 266 66.5
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 2.8e-96 355.9 285 63.2
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 3.7e-96 355.5 269 66.2
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 6.2e-96 354.8 285 63.2
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 8.1e-96 354.4 267 65.2
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 9.0e-95 350.9 288 63.9
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.5e-94 350.1 268 63.1
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 2.6e-94 349.4 288 63.9
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 3.8e-93 345.5 233 72.5
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 4.9e-93 345.1 277 64.6
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 4.9e-93 345.1 241 69.3
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 3.9e-90 335.5 252 66.3
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 1.3e-88 330.5 343 52.8
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 2.8e-88 329.3 266 64.7
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 4.8e-88 328.6 211 72.5
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 1.4e-87 327.0 270 64.4
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.9e-85 319.3 247 65.6
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.5e-84 316.2 251 62.5
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 7.2e-84 314.7 264 63.6
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 2.2e-80 303.1 278 57.9
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 1.8e-79 300.1 183 77.0
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 5.3e-79 298.5 213 70.9
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 5.5e-76 288.5 243 61.7
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 9.4e-76 287.7 243 61.7
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 4.6e-75 285.4 327 49.2
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.0e-74 284.3 158 88.0
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.7e-74 281.6 277 54.2
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 6.7e-74 281.6 288 52.8
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 2.0e-70 270.0 245 62.0
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 2.6e-70 269.6 203 67.5
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 6.1e-67 258.5 251 53.8
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 1.0e-58 231.1 176 66.5
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 7.2e-44 181.8 101 79.2
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 3.6e-43 179.5 175 52.6
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 7.8e-38 161.8 285 36.8
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.8e-35 153.3 107 68.2
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 8.6e-29 131.7 193 37.8
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.5e-12 77.8 58 72.4
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 7.3e-12 75.5 101 42.6


User provided reference genes

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