Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A609T53 Lonicera japonica HOM05D001331 ORTHO05D001157 4.4e-95 351.3 177 100.0
Actinidia30892 Actinidia chinensis HOM05D001331 ORTHO05D001157 9.6e-26 120.9 156 46.8
CSS0043172 Camellia sinensis var. sinensis HOM05D001331 ORTHO05D001157 1.2e-23 114.0 176 42.6
Dinv25676 Davidia involucrata HOM05D001331 ORTHO05D001157 4.2e-21 105.5 185 39.5
Rhsim08G0045100 Rhododendron simsii HOM05D001331 ORTHO05D001157 7.9e-20 101.3 177 39.0
CSS0001891 Camellia sinensis var. sinensis HOM05D005595 ORTHO05D006962 2.3e-19 99.8 161 42.2
Dinv33363 Davidia involucrata HOM05D001331 ORTHO05D001157 6.7e-19 98.2 186 38.2
vmacro00334 Vaccinium macrocarpon HOM05D001331 ORTHO05D001157 3.3e-18 95.9 164 38.4
Hma1.2p1_1219F.1_g267890 Hydrangea macrophylla HOM05D001331 ORTHO05D001157 5.0e-14 82.0 178 37.1
CiPaw.03G052700 Carya illinoinensis HOM05D001331 ORTHO05D001157 2.1e-12 76.6 187 32.6
Cc07_g00590 Coffea canephora HOM05D001331 ORTHO05D001157 2.1e-12 76.6 167 35.9
GSVIVG01001820001 Vitis vinifera HOM05D001331 ORTHO05D001157 7.9e-12 74.7 151 35.8
Manes.15G158100 Manihot esculenta HOM05D001331 ORTHO05D001157 3.3e-10 69.3 209 30.6
TAR622G0469 Trochodendron aralioides HOM05D001331 ORTHO05D001157 3.3e-10 69.3 143 38.5
Sc07g0004190 Simmondsia chinensis HOM05D001331 ORTHO05D001157 2.2e-09 66.6 185 31.4
PGSC0003DMG401020221 Solanum tuberosum HOM05D001331 ORTHO05D001157 8.2e-09 64.7 212 28.8
TAR629G1584 Trochodendron aralioides HOM05D001331 ORTHO05D001157 8.2e-09 64.7 147 32.7
Solyc02g093930.4 Solanum lycopersicum HOM05D001331 ORTHO05D001157 1.4e-08 63.9 212 27.8
Sopen02g038580 Solanum pennellii HOM05D001331 ORTHO05D001157 5.3e-08 62.0 212 27.4
CAN.G473.78 Capsicum annuum HOM05D001331 ORTHO05D001157 1.5e-07 60.5 211 29.4
Prupe.3G302600 Prunus persica HOM05D001331 ORTHO05D001157 1.5e-07 60.5 109 40.4
Thecc.08G160900 Theobroma cacao HOM05D001331 ORTHO05D001157 2.2e-06 56.6 94 40.4
Nitab4.5_0001031g0030 Nicotiana tabacum HOM05D001331 ORTHO05D001157 2.9e-06 56.2 213 26.3


User provided reference genes

Program Settings