Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A489T32 Lonicera japonica HOM05D005056 ORTHO05D006487 6.9e-112 407.5 237 100.0
Hma1.2p1_0150F.1_g066780 Hydrangea macrophylla HOM05D005056 ORTHO05D006487 1.9e-53 213.4 225 58.2
Dinv04468 Davidia involucrata HOM05D005056 ORTHO05D006487 1.6e-52 210.3 224 60.3
DCAR_019081 Daucus carota HOM05D005056 ORTHO05D006487 6.8e-51 204.9 248 50.8
QL93p1902_0036 Quercus lobata HOM05D005056 ORTHO05D006487 1.3e-49 200.7 249 51.8
Haze_01366 Corylus avellana HOM05D005056 ORTHO05D006487 5.4e-48 195.3 244 51.6
QL10p054991 Quercus lobata HOM05D005056 ORTHO05D006487 1.2e-47 194.1 244 55.7
Atru.chr3.3232 Acer truncatum HOM05D005056 ORTHO05D006487 2.9e-46 189.5 215 57.7
Prupe.1G206800 Prunus persica HOM05D005056 ORTHO05D006487 2.1e-44 183.3 220 53.6
Cfa015266 Carpinus fangiana HOM05D005056 ORTHO05D006487 6.1e-44 181.8 244 50.0
Migut.N03070 Erythranthe guttata HOM05D005056 ORTHO05D006487 5.2e-43 178.7 219 48.9
TAR636G2681 Trochodendron aralioides HOM05D005056 ORTHO05D006487 5.2e-43 178.7 242 51.7
Glyma.02G137100 Glycine max HOM05D005056 ORTHO05D006487 2.0e-42 176.8 219 50.7
Ciclev10019145m.g Citrus clementina HOM05D005056 ORTHO05D006487 3.4e-42 176.0 208 53.8
CiPaw.02G100700 Carya illinoinensis HOM05D005056 ORTHO05D006487 5.8e-42 175.3 232 51.3
Thecc.05G215400 Theobroma cacao HOM05D005056 ORTHO05D006487 5.8e-42 175.3 255 43.9
GSVIVG01038137001 Vitis vinifera HOM05D005056 ORTHO05D006487 9.8e-42 174.5 238 50.4
Manes.16G069500 Manihot esculenta HOM05D005056 ORTHO05D006487 2.2e-41 173.3 215 50.2
TWI38G0332 Tripterygium wilfordii HOM05D005056 ORTHO05D006487 2.2e-41 173.3 234 48.3
Glyma.07G208300 Glycine max HOM05D005056 ORTHO05D006487 2.9e-41 172.9 232 47.0
SGA_v2.0_scaffold289G47281 Striga asiatica HOM05D005056 ORTHO05D006487 3.7e-41 172.6 215 48.8
RcHm_v2.0_Chr7g0219421 Rosa chinensis HOM05D005056 ORTHO05D006487 4.9e-41 172.2 229 48.9
Peaxi162Scf00568g00417 Petunia axillaris HOM05D005056 ORTHO05D006487 1.4e-40 170.6 226 49.6
Cc03_g13950 Coffea canephora HOM05D005056 ORTHO05D006487 1.9e-40 170.2 219 50.2
MD17G1177700 Malus domestica HOM05D005056 ORTHO05D006487 1.9e-40 170.2 234 50.4
Atru.chr4.1428 Acer truncatum HOM05D005056 ORTHO05D006487 2.4e-40 169.9 183 58.5
Nitab4.5_0002129g0080 Nicotiana tabacum HOM05D005056 ORTHO05D006487 3.2e-40 169.5 232 49.1
FAN04G0894 Fragaria x ananassa HOM05D005056 ORTHO05D006487 5.4e-40 168.7 219 48.9
vmacro03868 Vaccinium macrocarpon HOM05D005056 ORTHO05D006487 5.4e-40 168.7 226 49.6
FvH4_5g27692 Fragaria vesca HOM05D005056 ORTHO05D006487 9.2e-40 167.9 219 48.4
CSS0024905 Camellia sinensis var. sinensis HOM05D005056 ORTHO05D006487 1.2e-39 167.5 208 53.4
CSS0004898 Camellia sinensis var. sinensis HOM05D005056 ORTHO05D006487 1.6e-39 167.2 208 53.4
Sopen11g030040 Solanum pennellii HOM05D005056 ORTHO05D006487 1.6e-39 167.2 223 48.9
Gorai.012G150100 Gossypium raimondii HOM05D005056 ORTHO05D006487 2.0e-39 166.8 240 45.8
Oeu018048.1 Olea europaea HOM05D005056 ORTHO05D006487 2.7e-39 166.4 280 42.1
Duzib128G0002 Durio zibethinus HOM05D005056 ORTHO05D006487 4.6e-39 165.6 224 48.2
PGR142G4138 Punica granatum HOM05D005056 ORTHO05D006487 4.6e-39 165.6 243 46.5
Solyc11g072390.2 Solanum lycopersicum HOM05D005056 ORTHO05D006487 4.6e-39 165.6 223 48.0
Sopen11g029990 Solanum pennellii HOM05D005056 ORTHO05D006487 6.0e-39 165.2 232 47.8
CANSAT56G3616 Cannabis sativa HOM05D005056 ORTHO05D006487 1.0e-38 164.5 215 48.4
Rhsim13G0194600 Rhododendron simsii HOM05D005056 ORTHO05D006656 1.3e-38 164.1 250 44.8
COL.COLO4_09146 Corchorus olitorius HOM05D005056 ORTHO05D006487 1.7e-38 163.7 214 49.5
FAN18G4484 Fragaria x ananassa HOM05D005056 ORTHO05D006487 1.7e-38 163.7 219 47.5
Lsat_1_v5_gn_2_46281 Lactuca sativa HOM05D005056 ORTHO05D006487 2.3e-38 163.3 192 53.1
SalBow1G2014 Salvia bowleyana HOM05D005056 ORTHO05D006487 2.3e-38 163.3 218 45.4
Solyc11g072320.3 Solanum lycopersicum HOM05D005056 ORTHO05D006487 2.3e-38 163.3 232 47.4
FAN13G0846 Fragaria x ananassa HOM05D005056 ORTHO05D006487 3.9e-38 162.5 219 47.5
Sabra13G0104700 Salix brachista HOM05D005056 ORTHO05D006487 3.9e-38 162.5 223 47.5
Sabra13G0105000 Salix brachista HOM05D005056 ORTHO05D006487 3.9e-38 162.5 223 47.5
CAN.G308.62 Capsicum annuum HOM05D005056 ORTHO05D006487 5.0e-38 162.2 234 44.9
Nitab4.5_0001802g0080 Nicotiana tabacum HOM05D005056 ORTHO05D006487 5.0e-38 162.2 219 48.4
Potri.013G125800 Populus trichocarpa HOM05D005056 ORTHO05D006487 5.0e-38 162.2 231 53.7
arahy.Tifrunner.gnm1.ann1.X1H480 Arachis hypogaea HOM05D005056 ORTHO05D006487 6.6e-38 161.8 225 46.2
FAN08G2023 Fragaria x ananassa HOM05D005056 ORTHO05D006487 8.6e-38 161.4 219 46.6
arahy.Tifrunner.gnm1.ann1.K7ZH1T Arachis hypogaea HOM05D005056 ORTHO05D006487 1.5e-37 160.6 239 43.5
Cpa.g.sc114.8 Carica papaya HOM05D005056 ORTHO05D006487 1.9e-37 160.2 244 45.5
ECA238G2929 Erigeron canadensis HOM05D005056 ORTHO05D006487 2.5e-37 159.8 175 53.1
Sabra13G0105200 Salix brachista HOM05D005056 ORTHO05D006487 3.3e-37 159.5 209 48.3
Sabra13G0105300 Salix brachista HOM05D005056 ORTHO05D006487 3.3e-37 159.5 209 48.3
Lalb_Chr16g0384481 Lupinus albus HOM05D005056 ORTHO05D006487 9.5e-37 157.9 223 45.7
Gohir.D04G162100 Gossypium hirsutum HOM05D005056 ORTHO05D006487 1.2e-36 157.5 251 44.2
Phvul.003G296300 Phaseolus vulgaris HOM05D005056 ORTHO05D006487 4.7e-36 155.6 219 51.1
Gohir.A04G120600 Gossypium hirsutum HOM05D005056 ORTHO05D006487 1.1e-35 154.5 243 43.2
Hma1.2p1_0150F.1_g066790 Hydrangea macrophylla HOM05D005056 ORTHO05D006487 1.1e-35 154.5 178 54.5
HanXRQChr14g0439801 Helianthus annuus HOM05D005056 ORTHO05D006487 3.1e-35 152.9 252 45.2
MBI18_g06087_MAGBIO Magnolia biondii HOM05D005056 ORTHO05D006487 6.8e-35 151.8 219 48.4
Sed0010490 Sechium edule HOM05D005056 ORTHO05D006487 2.0e-34 150.2 219 46.1
VMungo0251G2998 Vigna mungo HOM05D005056 ORTHO05D006487 2.6e-34 149.8 221 47.1
Sc08g0000580 Simmondsia chinensis HOM05D005056 ORTHO05D006487 4.4e-34 149.1 200 46.5
ClCG06G001090 Citrullus lanatus HOM05D005056 ORTHO05D006487 2.2e-33 146.7 235 44.3
Eucgr.H00317 Eucalyptus grandis HOM05D005056 ORTHO05D006487 3.7e-33 146.0 201 47.3
TPR.G23553 Trifolium pratense HOM05D005056 ORTHO05D006487 1.4e-32 144.1 217 41.9
Medtr4g087270 Medicago truncatula HOM05D005056 ORTHO05D006487 3.2e-32 142.9 228 45.6
CARHR138830 Cardamine hirsuta HOM05D005056 ORTHO05D006487 1.6e-31 140.6 217 44.7
Ca_18642_v3 Cicer arietinum L. HOM05D005056 ORTHO05D006487 2.7e-31 139.8 225 42.7
Psat7g121360 Pisum sativum HOM05D005056 ORTHO05D006487 6.0e-31 138.7 232 42.2
AL4G42470 Arabidopsis lyrata HOM05D005056 ORTHO05D006487 1.7e-30 137.1 216 43.1
Sp4g25750 Schrenkiella parvula HOM05D005056 ORTHO05D006487 2.3e-30 136.7 221 45.2
MELO3C022426.2 Cucumis melo HOM05D005056 ORTHO05D006487 1.9e-29 133.7 232 42.2
CsaV3_6G007040 Cucumis sativus L. HOM05D005056 ORTHO05D006487 2.5e-29 133.3 192 44.8
Carub.0004s2618 Capsella rubella HOM05D005056 ORTHO05D006487 3.3e-29 132.9 215 41.9
BcaB01g03369 Brassica carinata HOM05D005056 ORTHO05D006487 7.3e-29 131.7 231 42.4
AT2G43650 Arabidopsis thaliana HOM05D005056 ORTHO05D006487 1.2e-28 131.0 215 42.8
Os01g0104800 Oryza sativa ssp. japonica HOM05D005056 ORTHO05D006487 4.7e-28 129.0 210 39.0
PSO170G2549 Papaver somniferum HOM05D005056 ORTHO05D006487 1.8e-27 127.1 224 50.0
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 2.3e-27 126.7 222 41.4
Hund06242 Selenicereus undatus HOM05D005056 ORTHO05D006487 5.2e-27 125.6 208 41.8
A03p24390 Brassica napus HOM05D005056 ORTHO05D006487 6.8e-27 125.2 220 42.7
EL10Ac9g21710 Beta vulgaris HOM05D005056 ORTHO05D006487 2.0e-26 123.6 214 43.9
BraA03t11648Z Brassica rapa HOM05D005056 ORTHO05D006487 2.6e-26 123.2 220 42.3
Aa31LG1G25370 Aethionema arabicum HOM05D005056 ORTHO05D006487 5.8e-26 122.1 215 38.6
BcaC01g05222 Brassica carinata HOM05D005056 ORTHO05D006487 5.8e-26 122.1 220 41.8
THA.LOC104803998 Tarenaya hassleriana HOM05D005056 ORTHO05D006487 9.9e-26 121.3 211 42.7
C03p29070 Brassica napus HOM05D005056 ORTHO05D006487 6.4e-25 118.6 221 41.6
BolC3t15261H Brassica oleracea HOM05D000026 ORTHO05D000094 6.4e-25 118.6 221 41.6
PSO302G0034 Papaver somniferum HOM05D005056 ORTHO05D006487 3.2e-24 116.3 222 47.3
Aqoxy5G00514 Aquilegia oxysepala HOM05D005056 ORTHO05D006487 5.4e-24 115.5 231 39.8
HPP92_014516 Vanilla planifolia HOM05D005056 ORTHO05D006487 7.1e-24 115.2 179 39.7
Ah.01g019270 Amaranthus hybridus HOM05D005056 ORTHO05D006487 7.8e-23 111.7 199 41.7
Lj1g0023120 Lotus japonicus HOM05D005056 ORTHO05D006487 1.7e-22 110.5 218 44.5
Thhalv10001371m.g Eutrema salsugineum HOM05D005056 ORTHO05D006487 9.6e-21 104.8 154 42.2
SEGI_33254 Sequoiadendron giganteum HOM05D005056 ORTHO05D006487 2.4e-19 100.1 204 37.7
Zm00001eb034060 Zea mays HOM05D005056 ORTHO05D006487 5.2e-19 99.0 249 32.5
MD04G1048900 Malus domestica HOM05D005056 ORTHO05D006487 8.9e-19 98.2 142 45.8
CDE04G2996 Ceratophyllum demersum HOM05D005056 ORTHO05D006487 1.5e-18 97.4 245 34.7
AUR62016951 Chenopodium quinoa HOM05D005056 ORTHO05D006487 4.4e-18 95.9 235 37.4
AUR62016753 Chenopodium quinoa HOM05D005056 ORTHO05D006487 5.8e-18 95.5 235 37.0
Lj4g0012801 Lotus japonicus HOM05D005056 ORTHO05D006487 1.7e-17 94.0 152 47.4
AUR62011304 Chenopodium quinoa HOM05D005056 ORTHO05D006487 3.8e-17 92.8 232 34.1
TPR.G1297 Trifolium pratense HOM05D005056 ORTHO05D006487 6.0e-15 85.5 148 41.9
Eucgr.H00313 Eucalyptus grandis HOM05D005056 ORTHO05D006487 4.3e-13 79.3 119 44.5
Mapoly0041s0093 Marchantia polymorpha HOM05D005056 ORTHO05D006403 4.0e-11 72.8 175 32.6
Aqoxy5G03459 Aquilegia oxysepala HOM05D005056 ORTHO05D006487 5.8e-10 68.9 187 31.0
AagrBONN_evm.TU.Sc2ySwM_228.4407 Anthoceros agrestis HOM05D005056 ORTHO05D006403 3.8e-09 66.2 236 30.5
ATR0763G006 Amborella trichopoda HOM05D005056 ORTHO05D006487 3.0e-06 56.6 125 37.6
QL10p055599 Quercus lobata HOM05D005056 ORTHO05D006487 6.6e-06 55.5 74 44.6


User provided reference genes

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