Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0021076 Lotus japonicus HOM05D002142 ORTHO05D000105 3.2e-49 199.5 262 100.0
Lj5g0019010 Lotus japonicus HOM05D002142 ORTHO05D001189 3.4e-11 73.2 45 84.4
arahy.Tifrunner.gnm1.ann1.C9MEAE Arachis hypogaea HOM05D002142 ORTHO05D001189 7.6e-11 72.0 84 61.9
LjContig00408g0000558 Lotus japonicus HOM05D002142 ORTHO05D001189 2.4e-09 67.0 154 51.9
Rhsim02G0255400 Rhododendron simsii HOM05D002142 ORTHO05D001189 2.4e-09 67.0 83 59.0
Glyma.12G235000 Glycine max HOM05D002142 ORTHO05D001189 3.2e-09 66.6 45 82.2
MD06G1126300 Malus domestica HOM05D002142 ORTHO05D001189 3.2e-09 66.6 82 51.2
Manes.01G000031 Manihot esculenta HOM05D002142 ORTHO05D001189 4.2e-09 66.2 84 61.9
CANSAT01G1306 Cannabis sativa HOM05D002142 ORTHO05D001189 7.1e-09 65.5 45 75.6
Glyma.13G264100 Glycine max HOM05D002142 ORTHO05D001189 7.1e-09 65.5 45 80.0
Phvul.005G075600 Phaseolus vulgaris HOM05D002142 ORTHO05D001189 1.2e-08 64.7 45 82.2
VMungo1080G1137 Vigna mungo HOM05D002142 ORTHO05D001189 1.2e-08 64.7 45 82.2
Oeu020470.1 Olea europaea HOM05D002142 ORTHO05D001189 6.0e-08 62.4 45 71.1
Solyc04g007280.3 Solanum lycopersicum HOM05D002142 ORTHO05D001189 6.0e-08 62.4 64 67.2
Sopen04g002340 Solanum pennellii HOM05D002142 ORTHO05D001189 6.0e-08 62.4 64 67.2
Migut.E00710 Erythranthe guttata HOM05D002142 ORTHO05D001189 7.8e-08 62.0 81 54.3
TPR.G21595 Trifolium pratense HOM05D002142 ORTHO05D001189 1.0e-07 61.6 88 53.4
Ciclev10018664m.g Citrus clementina HOM05D002142 ORTHO05D001189 1.3e-07 61.2 45 75.6
Atru.chr6.1560 Acer truncatum HOM05D002142 ORTHO05D001189 1.7e-07 60.8 84 52.4
ATR0796G136 Amborella trichopoda HOM05D002142 ORTHO05D001189 2.3e-07 60.5 45 66.7
Nn4g25332 Nelumbo nucifera HOM05D002142 ORTHO05D001189 2.3e-07 60.5 45 68.9
TAR365G0293 Trochodendron aralioides HOM05D002142 ORTHO05D001189 2.3e-07 60.5 45 68.9
Oeu063646.1 Olea europaea HOM05D002142 ORTHO05D001189 3.0e-07 60.1 45 68.9
SGA_v2.0_scaffold88G27237 Striga asiatica HOM05D002142 ORTHO05D001189 3.0e-07 60.1 83 55.4
Prupe.5G136300 Prunus persica HOM05D002142 ORTHO05D001189 3.9e-07 59.7 45 68.9
TWI15G0084 Tripterygium wilfordii HOM05D002142 ORTHO05D001189 8.7e-07 58.5 87 49.4
QL02p026881 Quercus lobata HOM05D002142 ORTHO05D001189 1.1e-06 58.2 83 55.4
CSS0028442 Camellia sinensis var. sinensis HOM05D002142 ORTHO05D001189 1.9e-06 57.4 43 69.8
CSS0042091 Camellia sinensis var. sinensis HOM05D002142 ORTHO05D001189 1.9e-06 57.4 43 69.8
CSS0024688 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 2.5e-06 57.0 43 69.8
Ciclev10000333m.g Citrus clementina HOM05D002142 ORTHO05D001189 2.5e-06 57.0 83 57.8
TWI81G0844 Tripterygium wilfordii HOM05D002142 ORTHO05D001189 2.5e-06 57.0 87 48.3
Dinv30959 Davidia involucrata HOM05D002142 ORTHO05D001189 4.3e-06 56.2 45 64.4
vmacro11473 Vaccinium macrocarpon HOM05D002142 ORTHO05D001189 4.3e-06 56.2 45 68.9
CDE09G0071 Ceratophyllum demersum HOM05D002142 ORTHO05D001189 5.6e-06 55.8 44 61.4
Cc08_g17090 Coffea canephora HOM05D002142 ORTHO05D001189 5.6e-06 55.8 81 54.3


User provided reference genes

Program Settings