Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P535T15 Lonicera japonica HOM05D001426 ORTHO05D000022 9.0e-80 300.1 138 100.0
Lj8P356T29 Lonicera japonica HOM05D000155 ORTHO05D000022 1.2e-15 87.0 135 36.3
Cc00_g05270 Coffea canephora HOM05D000155 ORTHO05D000022 3.0e-14 82.4 136 38.2
Lju1058C1G0 Lonicera japonica HOM05D000155 ORTHO05D000022 8.6e-14 80.9 100 36.0
Cc03_g15170 Coffea canephora HOM05D000025 ORTHO05D000022 5.6e-13 78.2 135 40.7
Lj4P171T33 Lonicera japonica HOM05D000155 ORTHO05D000022 6.2e-12 74.7 94 40.4
Lj8C67G0 Lonicera japonica HOM05D001690 ORTHO05D000022 1.4e-11 73.6 138 32.6
PGSC0003DMG401009742 Solanum tuberosum HOM05D001426 ORTHO05D001389 9.8e-10 67.4 119 32.8
Nitab4.5_0000854g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.3e-09 67.0 120 30.8
Peaxi162Scf00236g00081 Petunia axillaris HOM05D000155 ORTHO05D000022 1.7e-09 66.6 132 33.3
Peaxi162Scf01249g00004 Petunia axillaris HOM05D000155 ORTHO05D000022 2.2e-09 66.2 137 32.1
Lj2P493T14 Lonicera japonica HOM05D000155 ORTHO05D000022 2.9e-09 65.9 105 34.3
Peaxi162Scf01249g00027 Petunia axillaris HOM05D000155 ORTHO05D000022 3.7e-09 65.5 132 33.3
Nitab4.5_0000278g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.9e-09 65.1 88 36.4
Nitab4.5_0004412g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.3e-09 64.3 87 37.9
PGSC0003DMG400016975 Solanum tuberosum HOM05D001426 ORTHO05D001389 8.3e-09 64.3 118 32.2
PGSC0003DMG400024870 Solanum tuberosum HOM05D000155 ORTHO05D000022 8.3e-09 64.3 105 36.2
Nitab4.5_0000088g0140 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.1e-08 63.9 120 31.7
PGSC0003DMG400046426 Solanum tuberosum HOM05D001426 ORTHO05D001389 1.1e-08 63.9 136 31.6
Nitab4.5_0000048g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.9e-08 63.2 117 32.5
Nitab4.5_0000340g0080 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.4e-08 62.8 120 35.8
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-08 62.8 132 35.6
Peaxi162Scf00388g00106 Petunia axillaris HOM05D001426 ORTHO05D001389 2.4e-08 62.8 137 27.7
SHI19424 Sapria himalayana HOM05D004990 ORTHO05D000022 2.4e-08 62.8 94 35.1
Nitab4.5_0008537g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.2e-08 62.4 119 31.1
Peaxi162Scf00789g00528 Petunia axillaris HOM05D001426 ORTHO05D001389 3.2e-08 62.4 126 33.3
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 3.2e-08 62.4 122 36.9
Lj2P495T27 Lonicera japonica HOM05D013435 ORTHO05D013087 4.1e-08 62.0 83 39.8
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 4.1e-08 62.0 122 36.9
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 4.1e-08 62.0 122 36.9
Nitab4.5_0002874g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.4e-08 61.6 119 31.9
Peaxi162Scf00075g00204 Petunia axillaris HOM05D001426 ORTHO05D001389 5.4e-08 61.6 126 33.3
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.4e-08 61.6 136 31.6
Peaxi162Scf00243g00113 Petunia axillaris HOM05D001426 ORTHO05D001389 7.1e-08 61.2 119 36.1
Nitab4.5_0000186g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 9.2e-08 60.8 116 31.0
Peaxi162Scf00055g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 9.2e-08 60.8 123 30.9
Nitab4.5_0001021g0180 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-07 60.5 88 34.1
Nitab4.5_0001637g0090 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.2e-07 60.5 88 36.4
Peaxi162Scf00004g00091 Petunia axillaris HOM05D001426 ORTHO05D001389 1.2e-07 60.5 126 34.1
Peaxi162Scf01062g00023 Petunia axillaris HOM05D001426 ORTHO05D001389 1.2e-07 60.5 119 31.9
Sopen04g008670 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-07 60.5 99 36.4
Nitab4.5_0001130g0250 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.6e-07 60.1 119 29.4
Peaxi162Scf00249g00043 Petunia axillaris HOM05D001426 ORTHO05D001389 1.6e-07 60.1 120 32.5
Peaxi162Scf00257g00218 Petunia axillaris HOM05D001426 ORTHO05D001389 1.6e-07 60.1 124 31.5
Peaxi162Scf02408g00006 Petunia axillaris HOM05D001426 ORTHO05D001389 1.6e-07 60.1 129 30.2
Peaxi162Scf53938g00004 Petunia axillaris HOM05D001426 ORTHO05D001389 1.6e-07 60.1 129 30.2
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 2.1e-07 59.7 136 31.6
Cc00_g05820 Coffea canephora HOM05D000155 ORTHO05D000022 2.1e-07 59.7 136 31.6
Nitab4.5_0000153g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-07 59.7 135 25.9
Nitab4.5_0000173g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-07 59.7 119 31.1
Nitab4.5_0000555g0190 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-07 59.7 88 33.0
Nitab4.5_0003465g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-07 59.7 88 31.8
Nitab4.5_0004235g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-07 59.7 90 31.1
Nitab4.5_0005427g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.1e-07 59.7 88 31.8
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 2.1e-07 59.7 123 32.5
Peaxi162Scf00524g00063 Petunia axillaris HOM05D001426 ORTHO05D001389 2.1e-07 59.7 103 35.9
Peaxi162Scf00552g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 2.1e-07 59.7 126 31.7
Nitab4.5_0003222g0050 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.7e-07 59.3 88 33.0
SEGI_23191 Sequoiadendron giganteum HOM05D000003 ORTHO05D000022 2.7e-07 59.3 132 34.8
SEGI_32247 Sequoiadendron giganteum HOM05D000898 ORTHO05D000762 2.7e-07 59.3 135 31.9
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 3.5e-07 58.9 92 31.5
Nitab4.5_0000311g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.5e-07 58.9 116 32.8
Cc00_g21050 Coffea canephora HOM05D000155 ORTHO05D000022 4.6e-07 58.5 132 35.6
Cc00_g24940 Coffea canephora HOM05D000155 ORTHO05D000022 4.6e-07 58.5 132 35.6
Cc06_g22510 Coffea canephora HOM05D000155 ORTHO05D000022 4.6e-07 58.5 132 35.6
Nitab4.5_0000147g0150 Nicotiana tabacum HOM05D001426 ORTHO05D001389 4.6e-07 58.5 85 36.5
SEGI_32552 Sequoiadendron giganteum HOM05D000155 ORTHO05D000022 4.6e-07 58.5 110 33.6
PGSC0003DMG400027758 Solanum tuberosum HOM05D001426 ORTHO05D001389 4.6e-07 58.5 121 36.4
CiPaw.04G193300 Carya illinoinensis HOM05D000053 ORTHO05D000035 6.0e-07 58.2 95 31.6
Nitab4.5_0003368g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.0e-07 58.2 100 35.0
Lj7C222T11 Lonicera japonica HOM05D013435 ORTHO05D000022 7.8e-07 57.8 78 37.2
Nitab4.5_0000011g0240 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.8e-07 57.8 119 31.1
Nitab4.5_0000268g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.8e-07 57.8 118 28.0
Nitab4.5_0000318g0190 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.8e-07 57.8 88 30.7
Nitab4.5_0004533g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 7.8e-07 57.8 107 31.8
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 7.8e-07 57.8 99 37.4
PGSC0003DMG400023541 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.8e-07 57.8 105 34.3
Lj2C249G4 Lonicera japonica HOM05D001398 ORTHO05D001467 1.0e-06 57.4 73 31.5
Nitab4.5_0000015g0200 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.0e-06 57.4 88 38.6
Nitab4.5_0001116g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.0e-06 57.4 119 30.3
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 1.0e-06 57.4 85 38.8
SHI33415 Sapria himalayana HOM05D000024 ORTHO05D000004 1.0e-06 57.4 105 35.2
Nitab4.5_0000023g0150 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.3e-06 57.0 95 30.5
SHI49077 Sapria himalayana HOM05D004990 ORTHO05D000022 1.3e-06 57.0 90 34.4
Peaxi162Scf00042g00112 Petunia axillaris HOM05D001426 ORTHO05D001389 1.7e-06 56.6 127 32.3
Peaxi162Scf00327g00054 Petunia axillaris HOM05D001426 ORTHO05D001389 1.7e-06 56.6 121 28.9
Peaxi162Scf00632g00037 Petunia axillaris HOM05D001426 ORTHO05D001389 1.7e-06 56.6 134 29.1
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 1.7e-06 56.6 102 33.3
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 1.7e-06 56.6 102 33.3
Peaxi162Scf00826g00012 Petunia axillaris HOM05D001426 ORTHO05D001389 1.7e-06 56.6 119 28.6
MBI03_g40524_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-06 56.2 99 36.4
MBI15_g35685_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-06 56.2 89 36.0
MBI19_g32881_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D000022 2.3e-06 56.2 119 31.1
Nitab4.5_0000209g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-06 56.2 88 36.4
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-06 56.2 132 31.1
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.3e-06 56.2 101 36.6
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 3.0e-06 55.8 94 37.2
Nitab4.5_0000002g0100 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.0e-06 55.8 104 28.8
Peaxi162Scf00008g10013 Petunia axillaris HOM05D001648 ORTHO05D001657 3.0e-06 55.8 89 37.1
SEGI_01428 Sequoiadendron giganteum HOM05D000155 ORTHO05D000022 3.0e-06 55.8 126 37.3
Nitab4.5_0000084g0250 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.9e-06 55.5 82 34.1
Nitab4.5_0002002g0070 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.9e-06 55.5 82 32.9
Peaxi162Scf00100g00613 Petunia axillaris HOM05D000155 ORTHO05D000022 3.9e-06 55.5 123 34.1
Peaxi162Scf00245g00018 Petunia axillaris HOM05D001426 ORTHO05D001389 3.9e-06 55.5 90 34.4
Peaxi162Scf00938g00016 Petunia axillaris HOM05D001426 ORTHO05D001389 3.9e-06 55.5 121 27.3
SHI29074 Sapria himalayana HOM05D004990 ORTHO05D000022 3.9e-06 55.5 85 41.2
SHI43079 Sapria himalayana HOM05D004990 ORTHO05D000022 3.9e-06 55.5 96 33.3
TWI81G0012 Tripterygium wilfordii HOM05D000155 ORTHO05D000022 3.9e-06 55.5 76 39.5
Nitab4.5_0002909g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.1e-06 55.1 83 41.0
Nitab4.5_0003667g0040 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.1e-06 55.1 88 33.0
Nitab4.5_0021692g0010 Nicotiana tabacum HOM05D001426 ORTHO05D001389 5.1e-06 55.1 86 34.9
Cc00_g15230 Coffea canephora HOM05D000155 ORTHO05D000022 6.6e-06 54.7 132 34.8
MBI01_g02776_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.6e-06 54.7 134 29.9
MBI14_g24034_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.6e-06 54.7 104 31.7
MBI19_g21653_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.6e-06 54.7 104 31.7
Nitab4.5_0000651g0160 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.6e-06 54.7 82 34.1
Nitab4.5_0000904g0060 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.6e-06 54.7 119 30.3
Nitab4.5_0000923g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.6e-06 54.7 88 38.6
Nitab4.5_0003814g0030 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.6e-06 54.7 79 34.2
Nitab4.5_0007332g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.6e-06 54.7 92 33.7
Peaxi162Scf00041g00183 Petunia axillaris HOM05D000155 ORTHO05D000022 6.6e-06 54.7 98 33.7
Peaxi162Scf00829g00051 Petunia axillaris HOM05D001426 ORTHO05D001389 6.6e-06 54.7 118 31.4
SHI38494 Sapria himalayana HOM05D000024 ORTHO05D000007 6.6e-06 54.7 90 34.4
PGSC0003DMG400014002 Solanum tuberosum HOM05D000003 ORTHO05D001389 6.6e-06 54.7 118 30.5
Nitab4.5_0000201g0120 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.6e-06 54.3 121 29.8
Nitab4.5_0000304g0130 Nicotiana tabacum HOM05D001426 ORTHO05D001389 8.6e-06 54.3 118 28.0
SHI34274 Sapria himalayana HOM05D004990 ORTHO05D000022 8.6e-06 54.3 86 33.7
SHI38759 Sapria himalayana HOM05D000024 ORTHO05D000022 8.6e-06 54.3 88 37.5


User provided reference genes

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