Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C798T14 Lonicera japonica HOM05D000095 ORTHO05D000393 2.8e-36 154.8 81 100.0
Dinv31142 Davidia involucrata HOM05D000095 ORTHO05D000393 7.0e-16 87.0 61 73.8
CSS0042242 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 2.7e-15 85.1 79 62.0
MBI15_g13303_MAGBIO Magnolia biondii HOM05D000095 ORTHO05D000393 1.0e-14 83.2 69 65.2
TAR622G0298 Trochodendron aralioides HOM05D000095 ORTHO05D000393 1.0e-14 83.2 70 62.9
Lj3P1045T56 Lonicera japonica HOM05D000095 ORTHO05D000393 1.7e-14 82.4 54 77.8
Oeu044540.1 Olea europaea HOM05D000095 ORTHO05D000393 2.3e-14 82.0 62 67.7
Oeu011720.1 Olea europaea HOM05D000095 ORTHO05D000393 8.6e-14 80.1 54 74.1
Hma1.2p1_0265F.1_g106350 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 1.5e-13 79.3 67 68.7
DCAR_024503 Daucus carota HOM05D000095 ORTHO05D000393 1.9e-13 79.0 72 65.3
SalBow2G0059 Salvia bowleyana HOM05D000095 ORTHO05D000393 3.3e-13 78.2 77 61.0
Dinv24930 Davidia involucrata HOM05D000095 ORTHO05D000393 4.3e-13 77.8 70 61.4
Nn4g22967 Nelumbo nucifera HOM05D000095 ORTHO05D000393 7.3e-13 77.0 72 58.3
TAR374G1699 Trochodendron aralioides HOM05D000095 ORTHO05D000393 9.5e-13 76.6 55 70.9
Nn3g17063 Nelumbo nucifera HOM05D000095 ORTHO05D000393 1.6e-12 75.9 63 61.9
SalBow2G3569 Salvia bowleyana HOM05D000095 ORTHO05D000393 1.6e-12 75.9 77 59.7
Migut.L01371 Erythranthe guttata HOM05D000095 ORTHO05D000393 2.1e-12 75.5 81 59.3
Duzib251G0069 Durio zibethinus HOM05D000095 ORTHO05D000393 3.6e-12 74.7 55 70.9
GSVIVG01020132001 Vitis vinifera HOM05D000095 ORTHO05D000393 4.7e-12 74.3 66 60.6
Thecc.02G238000 Theobroma cacao HOM05D000095 ORTHO05D000393 6.2e-12 73.9 68 61.8
Cc11_g13920 Coffea canephora HOM05D000095 ORTHO05D000393 8.1e-12 73.6 74 58.1
MSTRG.7848 Avicennia marina HOM05D000095 ORTHO05D000393 1.4e-11 72.8 84 53.6
MSTRG.650 Avicennia marina HOM05D000095 ORTHO05D000393 1.8e-11 72.4 59 69.5
Duzib248G0490 Durio zibethinus HOM05D000095 ORTHO05D000393 1.8e-11 72.4 65 63.1
Gohir.A11G322800 Gossypium hirsutum HOM05D000095 ORTHO05D000393 4.0e-11 71.2 59 64.4
Ciclev10032167m.g Citrus clementina HOM05D000095 ORTHO05D000393 5.2e-11 70.9 69 59.4
Gohir.D11G341900 Gossypium hirsutum HOM05D000095 ORTHO05D000393 5.2e-11 70.9 72 54.2
Gorai.007G371900 Gossypium raimondii HOM05D000095 ORTHO05D000393 5.2e-11 70.9 72 54.2
Aqoxy3G00853 Aquilegia oxysepala HOM05D000095 ORTHO05D000393 8.9e-11 70.1 61 63.9
Lsat_1_v5_gn_4_8401 Lactuca sativa HOM05D000095 ORTHO05D000393 8.9e-11 70.1 64 65.6
Duzib268G1361 Durio zibethinus HOM05D000095 ORTHO05D000393 1.2e-10 69.7 57 64.9
Potri.010G039233 Populus trichocarpa HOM05D000095 ORTHO05D000393 2.6e-10 68.6 65 63.1
Prupe.1G262700 Prunus persica HOM05D000095 ORTHO05D000393 3.4e-10 68.2 79 55.7
Sc04g0008730 Simmondsia chinensis HOM05D000095 ORTHO05D000393 3.4e-10 68.2 71 53.5
MD13G1084100 Malus domestica HOM05D000095 ORTHO05D000393 4.4e-10 67.8 79 49.4
Rhsim12G0127100 Rhododendron simsii HOM05D000095 ORTHO05D000393 5.8e-10 67.4 77 59.7
Manes.01G194000 Manihot esculenta HOM05D000095 ORTHO05D000393 7.5e-10 67.0 75 56.0
Potri.008G191800 Populus trichocarpa HOM05D000095 ORTHO05D000393 9.9e-10 66.6 76 56.6
Sabra08G0145300 Salix brachista HOM05D000095 ORTHO05D000393 9.9e-10 66.6 76 52.6
Aqoxy3G03173 Aquilegia oxysepala HOM05D000095 ORTHO05D000393 1.3e-09 66.2 82 47.6
Lalb_Chr05g0217371 Lupinus albus HOM05D000095 ORTHO05D000393 1.3e-09 66.2 84 52.4
ATR1128G119 Amborella trichopoda HOM05D000095 ORTHO05D000393 1.7e-09 65.9 76 50.0
Lsat_1_v5_gn_3_50181 Lactuca sativa HOM05D000095 ORTHO05D000393 1.7e-09 65.9 83 53.0
MD16G1083300 Malus domestica HOM05D000095 ORTHO05D000393 1.7e-09 65.9 81 54.3
unitig_8.g2943 Utricularia gibba HOM05D000095 ORTHO05D000393 1.7e-09 65.9 64 59.4
Cfa009079 Carpinus fangiana HOM05D000095 ORTHO05D000393 2.2e-09 65.5 80 56.2
Haze_12111 Corylus avellana HOM05D000095 ORTHO05D000393 2.2e-09 65.5 80 56.2
PGR119G1717 Punica granatum HOM05D000095 ORTHO05D000393 3.7e-09 64.7 64 56.2
HanXRQChr17g0570451 Helianthus annuus HOM05D000095 ORTHO05D000393 4.9e-09 64.3 79 55.7
SGA_v2.0_scaffold8G04285 Striga asiatica HOM05D000095 ORTHO05D000393 4.9e-09 64.3 80 52.5
Atru.chr11.1921 Acer truncatum HOM05D000095 ORTHO05D000393 8.3e-09 63.5 65 60.0
Actinidia24652 Actinidia chinensis HOM05D000095 ORTHO05D000393 8.3e-09 63.5 81 56.8
CiPaw.05G143900 Carya illinoinensis HOM05D000095 ORTHO05D000393 8.3e-09 63.5 80 57.5
Lalb_Chr09g0326611 Lupinus albus HOM05D000095 ORTHO05D000393 8.3e-09 63.5 67 59.7
Cpa.g.sc5.314 Carica papaya HOM05D000095 ORTHO05D000393 1.4e-08 62.8 64 53.1
Nitab4.5_0006560g0010 Nicotiana tabacum HOM05D000095 ORTHO05D000393 1.4e-08 62.8 70 57.1
VMungo1215G2761 Vigna mungo HOM05D000095 ORTHO05D000393 1.4e-08 62.8 65 61.5
ECA234G0419 Erigeron canadensis HOM05D000095 ORTHO05D000393 1.9e-08 62.4 70 55.7
AL2G29240 Arabidopsis lyrata HOM05D000095 ORTHO05D000393 2.4e-08 62.0 72 54.2
CiPaw.06G077600 Carya illinoinensis HOM05D000095 ORTHO05D000393 2.4e-08 62.0 57 66.7
Ca_15202_v3 Cicer arietinum L. HOM05D000095 ORTHO05D000393 2.4e-08 62.0 83 50.6
Lj2g0017688 Lotus japonicus HOM05D000095 ORTHO05D000393 2.4e-08 62.0 61 57.4
TWI18G1177 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 3.2e-08 61.6 69 53.6
AT1G70000 Arabidopsis thaliana HOM05D000095 ORTHO05D000393 4.1e-08 61.2 71 50.7
FvH4_5g16170 Fragaria vesca HOM05D000095 ORTHO05D000393 4.1e-08 61.2 85 43.5
Nitab4.5_0001908g0030 Nicotiana tabacum HOM05D000095 ORTHO05D000393 4.1e-08 61.2 59 59.3
FAN17G1563 Fragaria x ananassa HOM05D000095 ORTHO05D000393 5.4e-08 60.8 81 50.6
Glyma.01G038600 Glycine max HOM05D000095 ORTHO05D000393 5.4e-08 60.8 75 56.0
Glyma.02G026300 Glycine max HOM05D000095 ORTHO05D000393 5.4e-08 60.8 68 57.4
QL03p067524 Quercus lobata HOM05D000095 ORTHO05D000393 5.4e-08 60.8 64 56.2
RcHm_v2.0_Chr4g0444961 Rosa chinensis HOM05D000095 ORTHO05D000393 5.4e-08 60.8 81 49.4
COL.COLO4_36264 Corchorus olitorius HOM05D000095 ORTHO05D000393 7.1e-08 60.5 60 55.0
FAN18G3501 Fragaria x ananassa HOM05D000095 ORTHO05D000393 7.1e-08 60.5 84 44.0
TWI36G1712 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 7.1e-08 60.5 56 60.7
Aa31LG4G10870 Aethionema arabicum HOM05D000095 ORTHO05D000393 9.2e-08 60.1 60 58.3
Eucgr.B02575 Eucalyptus grandis HOM05D000095 ORTHO05D000393 9.2e-08 60.1 57 63.2
FvH4_4g35340 Fragaria vesca HOM05D000095 ORTHO05D000393 9.2e-08 60.1 81 49.4
FAN07G1738 Fragaria x ananassa HOM05D000095 ORTHO05D000393 9.2e-08 60.1 81 49.4
FAN08G1412 Fragaria x ananassa HOM05D000095 ORTHO05D000393 9.2e-08 60.1 86 45.3
FAN12G1384 Fragaria x ananassa HOM05D000095 ORTHO05D000393 9.2e-08 60.1 81 49.4
vmacro16303 Vaccinium macrocarpon HOM05D000095 ORTHO05D000393 9.2e-08 60.1 77 53.2
Actinidia37683 Actinidia chinensis HOM05D000095 ORTHO05D000393 1.2e-07 59.7 77 49.4
FAN04G2138 Fragaria x ananassa HOM05D000095 ORTHO05D000393 1.2e-07 59.7 75 48.0
GSVIVG01007843001 Vitis vinifera HOM05D000095 ORTHO05D000393 1.6e-07 59.3 59 59.3
BcaB03g15523 Brassica carinata HOM05D000095 ORTHO05D000393 2.1e-07 58.9 71 56.3
FAN13G2625 Fragaria x ananassa HOM05D000095 ORTHO05D000393 2.1e-07 58.9 84 42.9
Phvul.002G078600 Phaseolus vulgaris HOM05D000095 ORTHO05D000393 2.1e-07 58.9 81 51.9
Prupe.5G182000 Prunus persica HOM05D000095 ORTHO05D000393 2.1e-07 58.9 74 50.0
CANSAT01G0205 Cannabis sativa HOM05D000095 ORTHO05D000393 2.7e-07 58.5 84 50.0
Actinidia04947 Actinidia chinensis HOM05D000095 ORTHO05D000393 3.5e-07 58.2 77 49.4
unitig_22.g6922 Utricularia gibba HOM05D000095 ORTHO05D000393 3.5e-07 58.2 64 51.6
CARHR063100 Cardamine hirsuta HOM05D000095 ORTHO05D000393 6.0e-07 57.4 74 50.0
Psat2g116440 Pisum sativum HOM05D000095 ORTHO05D000393 6.0e-07 57.4 66 50.0
TWI81G0830 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 6.0e-07 57.4 87 42.5
Medtr5g037080 Medicago truncatula HOM05D000095 ORTHO05D000393 7.8e-07 57.0 73 49.3
Cpa.g.sc35.12 Carica papaya HOM05D000095 ORTHO05D000393 1.0e-06 56.6 80 45.0
MD14G1189300 Malus domestica HOM05D000095 ORTHO05D000393 1.0e-06 56.6 75 46.7
BcaB05g24512 Brassica carinata HOM05D000095 ORTHO05D000393 1.3e-06 56.2 77 49.4
Dinv07990 Davidia involucrata HOM05D000095 ORTHO05D000393 1.3e-06 56.2 83 48.2
MD06G1183300 Malus domestica HOM05D000095 ORTHO05D000393 1.3e-06 56.2 75 46.7
RcHm_v2.0_Chr7g0179981 Rosa chinensis HOM05D000095 ORTHO05D000393 1.3e-06 56.2 75 45.3
Carub.0002s1670 Capsella rubella HOM05D000095 ORTHO05D000393 1.7e-06 55.8 85 49.4
Sed0020792 Sechium edule HOM05D000095 ORTHO05D000393 1.7e-06 55.8 69 52.2
Actinidia19068 Actinidia chinensis HOM05D000095 ORTHO05D000393 3.0e-06 55.1 60 53.3
Lalb_Chr12g0201271 Lupinus albus HOM05D000095 ORTHO05D000393 3.0e-06 55.1 71 50.7
SEGI_00538 Sequoiadendron giganteum HOM05D000095 ORTHO05D000393 3.0e-06 55.1 57 52.6
SEGI_36144 Sequoiadendron giganteum HOM05D000095 ORTHO05D000393 3.0e-06 55.1 57 52.6
FAN22G1950 Fragaria x ananassa HOM05D000095 ORTHO05D000393 3.9e-06 54.7 81 46.9
Sp5g25110 Schrenkiella parvula HOM05D000095 ORTHO05D000393 5.1e-06 54.3 84 47.6
vmacro19343 Vaccinium macrocarpon HOM05D000095 ORTHO05D000393 5.1e-06 54.3 78 48.7
A02p16290 Brassica napus HOM05D000095 ORTHO05D000393 6.6e-06 53.9 61 55.7
A07p31260 Brassica napus HOM05D000095 ORTHO05D000393 6.6e-06 53.9 62 54.8
C02p27110 Brassica napus HOM05D000095 ORTHO05D000393 6.6e-06 53.9 61 55.7
BraA02t06687Z Brassica rapa HOM05D000095 ORTHO05D000393 6.6e-06 53.9 61 55.7
BraA07t30760Z Brassica rapa HOM05D000095 ORTHO05D000393 6.6e-06 53.9 62 54.8
CDE07G0092 Ceratophyllum demersum HOM05D000095 ORTHO05D000393 6.6e-06 53.9 63 47.6
SalBow5G0123 Salvia bowleyana HOM05D000095 ORTHO05D000393 6.6e-06 53.9 77 48.1
Sed0021603 Sechium edule HOM05D000095 ORTHO05D000393 6.6e-06 53.9 69 49.3
BcaC03g15151 Brassica carinata HOM05D000095 ORTHO05D000393 8.6e-06 53.5 61 55.7
BolC2t08775H Brassica oleracea HOM05D000095 ORTHO05D000393 8.6e-06 53.5 61 55.7
ClCG05G024870 Citrullus lanatus HOM05D000095 ORTHO05D000393 8.6e-06 53.5 59 61.0
TWI15G0941 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 8.6e-06 53.5 68 50.0


User provided reference genes

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